RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 C10orf25Q5T742 122 aa9.33□□□□□ -0.92
NCK1-202ENST00000460960 SDIM1Q6ZPB5 146 aa9.33□□□□□ -0.92
NCK1-202ENST00000460960 Q6ZRU5 148 aa9.33□□□□□ -0.92
NCK1-202ENST00000460960 LINC00469Q8N7U9 141 aa9.33□□□□□ -0.92
NCK1-202ENST00000460960 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.33□□□□□ -0.92
NCK1-202ENST00000460960 IGLV5-45A0A087WSX0 123 aa9.32□□□□□ -0.92
NCK1-202ENST00000460960 CHTF8P0CG12 524 aa9.32□□□□□ -0.92
NCK1-202ENST00000460960 C11orf86A6NJI1 115 aa9.31□□□□□ -0.92
NCK1-202ENST00000460960 SMIM1B2RUZ4 78 aa9.31□□□□□ -0.92
NCK1-202ENST00000460960 LEPROTL1O95214 131 aa9.31□□□□□ -0.92
NCK1-202ENST00000460960 APOMO95445 188 aa9.31□□□□□ -0.92
NCK1-202ENST00000460960 SPINK8P0C7L1 97 aa9.31□□□□□ -0.92
NCK1-202ENST00000460960 ZNF22P17026 224 aaPredicted RBP9.31□□□□□ -0.92
NCK1-202ENST00000460960 SYCNQ0VAF6 134 aa9.31□□□□□ -0.92
NCK1-202ENST00000460960 OR10D4PQ8NGN7 298 aa9.31□□□□□ -0.92
NCK1-202ENST00000460960 DPH3Q96FX2 82 aa9.31□□□□□ -0.92
NCK1-202ENST00000460960 CARD19Q96LW7 228 aa9.31□□□□□ -0.92
NCK1-202ENST00000460960 H0Y8G0 127 aa9.3□□□□□ -0.92
NCK1-202ENST00000460960 SEC11AP67812 179 aa9.3□□□□□ -0.92
NCK1-202ENST00000460960 COA6Q5JTJ3 125 aaKnown RBP9.3□□□□□ -0.92
NCK1-202ENST00000460960 C2orf82Q6UX34 121 aa9.3□□□□□ -0.92
NCK1-202ENST00000460960 UNQ6190/PRO20217Q6UXQ8 127 aa9.3□□□□□ -0.92
NCK1-202ENST00000460960 LINC01561Q8N1V8 128 aa9.3□□□□□ -0.92
NCK1-202ENST00000460960 CAMK2N2Q96S95 79 aa9.3□□□□□ -0.92
NCK1-202ENST00000460960 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.29□□□□□ -0.92
NCK1-202ENST00000460960 C2orf48Q96LS8 159 aa9.29□□□□□ -0.92
NCK1-202ENST00000460960 MRPL35Q9NZE8 188 aaKnown RBP9.29□□□□□ -0.92
NCK1-202ENST00000460960 TOMM7Q9P0U1 55 aa9.29□□□□□ -0.92
NCK1-202ENST00000460960 CHTOPQ9Y3Y2 248 aaKnown RBP9.29□□□□□ -0.92
NCK1-202ENST00000460960 TRAV12-1A0A0B4J245 112 aa9.28□□□□□ -0.92
NCK1-202ENST00000460960 ODF1Q14990 250 aa9.28□□□□□ -0.92
NCK1-202ENST00000460960 A0A096LNI7 61 aa9.27□□□□□ -0.93
NCK1-202ENST00000460960 PMCHL2Q9BQD1 86 aa9.27□□□□□ -0.93
NCK1-202ENST00000460960 C6orf48Q9UBA6 75 aa9.27□□□□□ -0.93
NCK1-202ENST00000460960 PACRGQ96M98 296 aaPredicted RBP9.26□□□□□ -0.93
NCK1-202ENST00000460960 HSPB8Q9UJY1 196 aa9.26□□□□□ -0.93
NCK1-202ENST00000460960 LRP2P98164 4655 aa9.26□□□□□ -0.93
NCK1-202ENST00000460960 IGKV2-24A0A0C4DH68 120 aa9.25□□□□□ -0.93
NCK1-202ENST00000460960 F8VRH5 84 aa9.25□□□□□ -0.93
NCK1-202ENST00000460960 C9orf116Q5BN46 136 aaPredicted RBP9.25□□□□□ -0.93
NCK1-202ENST00000460960 TMEM170BQ5T4T1 132 aa9.25□□□□□ -0.93
NCK1-202ENST00000460960 Q8IZM0 81 aa9.25□□□□□ -0.93
NCK1-202ENST00000460960 IGLV5-39A0A0G2JS06 123 aa9.24□□□□□ -0.93
NCK1-202ENST00000460960 NDUFA1O15239 70 aa9.24□□□□□ -0.93
NCK1-202ENST00000460960 CIRBPQ14011 172 aaKnown RBP9.24□□□□□ -0.93
NCK1-202ENST00000460960 SPACA4Q8TDM5 124 aa9.24□□□□□ -0.93
NCK1-202ENST00000460960 PRSS2P07478 247 aa9.23□□□□□ -0.93
NCK1-202ENST00000460960 COX7B2Q8TF08 81 aa9.23□□□□□ -0.93
NCK1-202ENST00000460960 RNF213Q63HN8 5207 aa9.23□□□□□ -0.93
NCK1-202ENST00000460960 H3BRM9 83 aa9.22□□□□□ -0.93
NCK1-202ENST00000460960 C6orf226Q5I0X4 101 aa9.22□□□□□ -0.93
NCK1-202ENST00000460960 A0A087WYN8 130 aa9.21□□□□□ -0.94
NCK1-202ENST00000460960 TMEM223A0PJW6 202 aa9.21□□□□□ -0.94
NCK1-202ENST00000460960 GAGE2BQ13066 116 aa9.21□□□□□ -0.94
NCK1-202ENST00000460960 RNF151Q2KHN1 245 aa9.21□□□□□ -0.94
NCK1-202ENST00000460960 MAJINQ3KP22 176 aa9.21□□□□□ -0.94
NCK1-202ENST00000460960 MAP1LC3CQ9BXW4 147 aa9.21□□□□□ -0.94
NCK1-202ENST00000460960 TNXBP22105 4242 aa9.2□□□□□ -0.94
NCK1-202ENST00000460960 LOC107984640A0A0U1RRK4 108 aa9.2□□□□□ -0.94
NCK1-202ENST00000460960 F8WDY8 70 aa9.2□□□□□ -0.94
NCK1-202ENST00000460960 SYS1-DBNDD2H3BUS1 97 aa9.2□□□□□ -0.94
NCK1-202ENST00000460960 C3orf79P0CE67 100 aa9.2□□□□□ -0.94
NCK1-202ENST00000460960 PTTG1IPP53801 180 aa9.2□□□□□ -0.94
NCK1-202ENST00000460960 CKS1BP61024 79 aa9.2□□□□□ -0.94
NCK1-202ENST00000460960 RPL18AQ02543 176 aaKnown RBP9.2□□□□□ -0.94
NCK1-202ENST00000460960 Q6ZRP5 223 aa9.2□□□□□ -0.94
NCK1-202ENST00000460960 C7orf33Q8WU49 177 aa9.2□□□□□ -0.94
NCK1-202ENST00000460960 HIST3H2BBQ8N257 126 aa9.19□□□□□ -0.94
NCK1-202ENST00000460960 TRBV30A0A0K0K1B3 111 aa9.18□□□□□ -0.94
NCK1-202ENST00000460960 DPM2O94777 84 aa9.17□□□□□ -0.94
NCK1-202ENST00000460960 TSPEAR-AS2P59090 65 aa9.17□□□□□ -0.94
NCK1-202ENST00000460960 KRTDAPP60985 99 aa9.17□□□□□ -0.94
NCK1-202ENST00000460960 A0A1W2PNN7 141 aa9.16□□□□□ -0.94
NCK1-202ENST00000460960 IGKCP01834 107 aa9.16□□□□□ -0.94
NCK1-202ENST00000460960 TLX1NBP0CAT3 122 aa9.16□□□□□ -0.94
NCK1-202ENST00000460960 PLNP26678 52 aa9.16□□□□□ -0.94
NCK1-202ENST00000460960 GAGE2EQ4V326 116 aa9.16□□□□□ -0.94
NCK1-202ENST00000460960 LINC01545Q5VT33 79 aa9.16□□□□□ -0.94
NCK1-202ENST00000460960 STPG4Q8N801 248 aa9.16□□□□□ -0.94
NCK1-202ENST00000460960 HIST1H2BLQ99880 126 aa9.16□□□□□ -0.94
NCK1-202ENST00000460960 PLAC8Q9NZF1 115 aa9.16□□□□□ -0.94
NCK1-202ENST00000460960 GAGE2DQ9UEU5 116 aa9.16□□□□□ -0.94
NCK1-202ENST00000460960 FAM168BA1KXE4 195 aa9.15□□□□□ -0.94
NCK1-202ENST00000460960 CXCL5P42830 114 aa9.15□□□□□ -0.94
NCK1-202ENST00000460960 SNRPEP62304 92 aaKnown RBP9.15□□□□□ -0.94
NCK1-202ENST00000460960 KRTAP7-1Q8IUC3 87 aa9.15□□□□□ -0.94
NCK1-202ENST00000460960 ZNF625Q96I27 306 aaPredicted RBP9.15□□□□□ -0.94
NCK1-202ENST00000460960 LINC01600Q96MT4 127 aa9.15□□□□□ -0.94
NCK1-202ENST00000460960 NDUFC2-KCTD14E9PQ53 114 aa9.14□□□□□ -0.95
NCK1-202ENST00000460960 C9orf129Q5T035 196 aaKnown RBP9.14□□□□□ -0.95
NCK1-202ENST00000460960 PET117Q6UWS5 81 aa9.14□□□□□ -0.95
NCK1-202ENST00000460960 S100A6P06703 90 aa9.12□□□□□ -0.95
NCK1-202ENST00000460960 PRR3P79522 188 aaKnown RBP9.12□□□□□ -0.95
NCK1-202ENST00000460960 XAGE1AQ9HD64 81 aa9.12□□□□□ -0.95
NCK1-202ENST00000460960 C5orf52A6NGY3 159 aa9.11□□□□□ -0.95
NCK1-202ENST00000460960 LINC00474Q9P2X8 69 aa9.11□□□□□ -0.95
NCK1-202ENST00000460960 PKIGQ9Y2B9 76 aa9.11□□□□□ -0.95
NCK1-202ENST00000460960 PFN2P35080 140 aa9.1□□□□□ -0.95
NCK1-202ENST00000460960 ATOH7Q8N100 152 aa9.1□□□□□ -0.95
NCK1-202ENST00000460960 LEPROTO15243 131 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms