RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 ABCA4P78363 2273 aa1.6□□□□□ -2.15
HPS3-203ENST00000460822 POLEQ07864 2286 aa1.6□□□□□ -2.15
HPS3-203ENST00000460822 CEP250Q9BV73 2442 aa1.6□□□□□ -2.15
HPS3-203ENST00000460822 TEX49A0A1B0GTD5 131 aa1.59□□□□□ -2.15
HPS3-203ENST00000460822 GNRH2O43555 120 aa1.59□□□□□ -2.15
HPS3-203ENST00000460822 PSCAO43653 123 aa1.59□□□□□ -2.15
HPS3-203ENST00000460822 IGHV3-33P01772 117 aa1.59□□□□□ -2.15
HPS3-203ENST00000460822 P0DMU3 169 aa1.59□□□□□ -2.15
HPS3-203ENST00000460822 FAM231AP0DMU4 169 aa1.59□□□□□ -2.15
HPS3-203ENST00000460822 FAM231CP0DMU5 169 aa1.59□□□□□ -2.15
HPS3-203ENST00000460822 RPL7P18124 248 aaKnown RBP1.59□□□□□ -2.15
HPS3-203ENST00000460822 TMEM155Q4W5P6 130 aa1.59□□□□□ -2.15
HPS3-203ENST00000460822 DYNAPQ8N1N2 210 aa1.59□□□□□ -2.15
HPS3-203ENST00000460822 C15orf53Q8NAA6 179 aa1.59□□□□□ -2.15
HPS3-203ENST00000460822 SCGB3A1Q96QR1 104 aa1.59□□□□□ -2.15
HPS3-203ENST00000460822 SLC50A1Q9BRV3 221 aa1.59□□□□□ -2.15
HPS3-203ENST00000460822 TMEM126AQ9H061 195 aa1.59□□□□□ -2.15
HPS3-203ENST00000460822 PRO1854Q9UHT4 67 aa1.59□□□□□ -2.15
HPS3-203ENST00000460822 PCNX1Q96RV3 2341 aa1.59□□□□□ -2.15
HPS3-203ENST00000460822 RELNP78509 3460 aa1.59□□□□□ -2.15
HPS3-203ENST00000460822 SVEP1Q4LDE5 3571 aa1.59□□□□□ -2.15
HPS3-203ENST00000460822 ZDBF2Q9HCK1 2354 aa1.59□□□□□ -2.15
HPS3-203ENST00000460822 TRAV2A0A0B4J234 112 aa1.59□□□□□ -2.16
HPS3-203ENST00000460822 RBAKDNA6NC62 111 aa1.59□□□□□ -2.16
HPS3-203ENST00000460822 CCL8P80075 99 aa1.59□□□□□ -2.16
HPS3-203ENST00000460822 ATXN8Q156A1 80 aa1.59□□□□□ -2.16
HPS3-203ENST00000460822 SPANXN1Q5VSR9 72 aa1.59□□□□□ -2.16
HPS3-203ENST00000460822 DCANP1Q8TF63 244 aa1.59□□□□□ -2.16
HPS3-203ENST00000460822 TMEM263Q8WUH6 116 aaKnown RBP1.59□□□□□ -2.16
HPS3-203ENST00000460822 RPL39LQ96EH5 51 aaKnown RBP1.59□□□□□ -2.16
HPS3-203ENST00000460822 AMELXQ99217 191 aa1.59□□□□□ -2.16
HPS3-203ENST00000460822 SPTBN2O15020 2390 aa1.59□□□□□ -2.16
HPS3-203ENST00000460822 MED13LQ71F56 2210 aa1.58□□□□□ -2.16
HPS3-203ENST00000460822 ATMQ13315 3056 aa1.58□□□□□ -2.16
HPS3-203ENST00000460822 A0A0J9YX75 114 aa1.58□□□□□ -2.16
HPS3-203ENST00000460822 TRBV7-7A0A0K0K1E9 115 aa1.58□□□□□ -2.16
HPS3-203ENST00000460822 TRBV10-2A0A0K0K1G8 114 aa1.58□□□□□ -2.16
HPS3-203ENST00000460822 J3QQQ9 107 aa1.58□□□□□ -2.16
HPS3-203ENST00000460822 M0R378 163 aa1.58□□□□□ -2.16
HPS3-203ENST00000460822 NDUFB3O43676 98 aa1.58□□□□□ -2.16
HPS3-203ENST00000460822 MSMBP08118 114 aa1.58□□□□□ -2.16
HPS3-203ENST00000460822 PSMB8P28062 276 aa1.58□□□□□ -2.16
HPS3-203ENST00000460822 PRB3Q04118 309 aaPredicted RBP1.58□□□□□ -2.16
HPS3-203ENST00000460822 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.58□□□□□ -2.16
HPS3-203ENST00000460822 C3orf56Q8N813 242 aa1.58□□□□□ -2.16
HPS3-203ENST00000460822 DPH3P1Q9H4G8 78 aa1.58□□□□□ -2.16
HPS3-203ENST00000460822 KAAG1Q9UBP8 84 aa1.58□□□□□ -2.16
HPS3-203ENST00000460822 LAMTOR3Q9UHA4 124 aa1.58□□□□□ -2.16
HPS3-203ENST00000460822 CNOT1A5YKK6 2376 aaKnown RBP1.58□□□□□ -2.16
HPS3-203ENST00000460822 ASH1LQ9NR48 2969 aaKnown RBP1.58□□□□□ -2.16
HPS3-203ENST00000460822 GPR179Q6PRD1 2367 aa1.58□□□□□ -2.16
HPS3-203ENST00000460822 CACNA1BQ00975 2339 aa1.58□□□□□ -2.16
HPS3-203ENST00000460822 TRAV7A0A075B6U4 112 aa1.58□□□□□ -2.16
HPS3-203ENST00000460822 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.58□□□□□ -2.16
HPS3-203ENST00000460822 TRBV30A0A0K0K1B3 111 aa1.58□□□□□ -2.16
HPS3-203ENST00000460822 FAM236AA0A1B0GUQ0 79 aa1.58□□□□□ -2.16
HPS3-203ENST00000460822 FAM236BA0A1B0GV22 79 aa1.58□□□□□ -2.16
HPS3-203ENST00000460822 IGIPA6NJ69 53 aa1.58□□□□□ -2.16
HPS3-203ENST00000460822 LY6LH3BQJ8 138 aa1.58□□□□□ -2.16
HPS3-203ENST00000460822 H7C2G1 150 aa1.58□□□□□ -2.16
HPS3-203ENST00000460822 M0R2P5 195 aa1.58□□□□□ -2.16
HPS3-203ENST00000460822 CTSGP08311 255 aa1.58□□□□□ -2.16
HPS3-203ENST00000460822 LINC00694P0DN24 101 aa1.58□□□□□ -2.16
HPS3-203ENST00000460822 LGALS3P17931 250 aaKnown RBP1.58□□□□□ -2.16
HPS3-203ENST00000460822 ZNF56Q15929 161 aa1.58□□□□□ -2.16
HPS3-203ENST00000460822 DEFB121Q5J5C9 76 aa1.58□□□□□ -2.16
HPS3-203ENST00000460822 TMEM170BQ5T4T1 132 aa1.58□□□□□ -2.16
HPS3-203ENST00000460822 C2orf82Q6UX34 121 aa1.58□□□□□ -2.16
HPS3-203ENST00000460822 MUSTN1Q8IVN3 82 aa1.58□□□□□ -2.16
HPS3-203ENST00000460822 Q8NDZ9 215 aa1.58□□□□□ -2.16
HPS3-203ENST00000460822 AGPAT4-IT1Q9H0P7 198 aa1.58□□□□□ -2.16
HPS3-203ENST00000460822 NCOR1O75376 2440 aa1.57□□□□□ -2.16
HPS3-203ENST00000460822 HRNRQ86YZ3 2850 aaPredicted RBP1.57□□□□□ -2.16
HPS3-203ENST00000460822 LOC107984640A0A0U1RRK4 108 aa1.57□□□□□ -2.16
HPS3-203ENST00000460822 A0A1W2PNM2 257 aa1.57□□□□□ -2.16
HPS3-203ENST00000460822 CLPSL1A2RUU4 121 aa1.57□□□□□ -2.16
HPS3-203ENST00000460822 SDHAF1A6NFY7 115 aa1.57□□□□□ -2.16
HPS3-203ENST00000460822 OOSP1A8MZH6 123 aa1.57□□□□□ -2.16
HPS3-203ENST00000460822 C19orf84I3L1E1 186 aa1.57□□□□□ -2.16
HPS3-203ENST00000460822 NPFFO15130 113 aa1.57□□□□□ -2.16
HPS3-203ENST00000460822 IGLV6-57P01721 117 aa1.57□□□□□ -2.16
HPS3-203ENST00000460822 MGPP08493 103 aa1.57□□□□□ -2.16
HPS3-203ENST00000460822 RPL39P62891 51 aaKnown RBP1.57□□□□□ -2.16
HPS3-203ENST00000460822 HES1Q14469 280 aa1.57□□□□□ -2.16
HPS3-203ENST00000460822 C9orf153Q5TBE3 101 aa1.57□□□□□ -2.16
HPS3-203ENST00000460822 FDCSPQ8NFU4 85 aa1.57□□□□□ -2.16
HPS3-203ENST00000460822 TMEM141Q96I45 108 aa1.57□□□□□ -2.16
HPS3-203ENST00000460822 APC2O95996 2303 aa1.56□□□□□ -2.16
HPS3-203ENST00000460822 TRAV17A0A0B4J275 112 aa1.56□□□□□ -2.16
HPS3-203ENST00000460822 A0A1B0GX51 115 aa1.56□□□□□ -2.16
HPS3-203ENST00000460822 A0A1W2PNN7 141 aa1.56□□□□□ -2.16
HPS3-203ENST00000460822 J3KT08 172 aa1.56□□□□□ -2.16
HPS3-203ENST00000460822 UQCRQO14949 82 aa1.56□□□□□ -2.16
HPS3-203ENST00000460822 PPP1R17O96001 155 aa1.56□□□□□ -2.16
HPS3-203ENST00000460822 RNASE3P12724 160 aaKnown RBP1.56□□□□□ -2.16
HPS3-203ENST00000460822 POLR2KP53803 58 aaKnown RBP1.56□□□□□ -2.16
HPS3-203ENST00000460822 CLEC2BQ92478 149 aa1.56□□□□□ -2.16
HPS3-203ENST00000460822 LENEPQ9Y5L5 61 aa1.56□□□□□ -2.16
HPS3-203ENST00000460822 AKAP13Q12802 2813 aa1.56□□□□□ -2.16
HPS3-203ENST00000460822 CELSR1Q9NYQ6 3014 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms