RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 MARF1Q9Y4F3 1742 aaKnown RBP0.48□□□□□ -2.33
SYPL1-203ENST00000460770 CFDP00746 253 aaPredicted RBP0.48□□□□□ -2.33
SYPL1-203ENST00000460770 DEFA5Q01523 94 aa0.48□□□□□ -2.33
SYPL1-203ENST00000460770 USMG5Q96IX5 58 aa0.48□□□□□ -2.33
SYPL1-203ENST00000460770 GAFA1Q96PS6 74 aa0.48□□□□□ -2.33
SYPL1-203ENST00000460770 SMCO4Q9NRQ5 59 aa0.48□□□□□ -2.33
SYPL1-203ENST00000460770 TOP2BQ02880 1626 aa0.48□□□□□ -2.33
SYPL1-203ENST00000460770 AKAP6Q13023 2319 aa0.48□□□□□ -2.33
SYPL1-203ENST00000460770 MYH4Q9Y623 1939 aa0.48□□□□□ -2.33
SYPL1-203ENST00000460770 EPRSP07814 1512 aaKnown RBP0.48□□□□□ -2.33
SYPL1-203ENST00000460770 ARHGEF12Q9NZN5 1544 aa0.48□□□□□ -2.33
SYPL1-203ENST00000460770 TOPAZ1Q8N9V7 1692 aa0.47□□□□□ -2.33
SYPL1-203ENST00000460770 PTPRQQ9UMZ3 2332 aa0.47□□□□□ -2.33
SYPL1-203ENST00000460770 RAPGEF6Q8TEU7 1601 aa0.47□□□□□ -2.33
SYPL1-203ENST00000460770 I3L3M4 83 aa0.47□□□□□ -2.33
SYPL1-203ENST00000460770 PDCD5O14737 125 aa0.47□□□□□ -2.33
SYPL1-203ENST00000460770 NDUFB1O75438 58 aa0.47□□□□□ -2.33
SYPL1-203ENST00000460770 COX8AP10176 69 aa0.47□□□□□ -2.33
SYPL1-203ENST00000460770 RPL38P63173 70 aaKnown RBP0.47□□□□□ -2.33
SYPL1-203ENST00000460770 BVES-AS1Q5T3Y7 98 aa0.47□□□□□ -2.33
SYPL1-203ENST00000460770 Q8IZM0 81 aa0.47□□□□□ -2.33
SYPL1-203ENST00000460770 WFDC9Q8NEX5 89 aa0.47□□□□□ -2.33
SYPL1-203ENST00000460770 UBE2D4Q9Y2X8 147 aa0.47□□□□□ -2.33
SYPL1-203ENST00000460770 ABCC3O15438 1527 aa0.47□□□□□ -2.33
SYPL1-203ENST00000460770 KDM3BQ7LBC6 1761 aa0.47□□□□□ -2.33
SYPL1-203ENST00000460770 FANCAO15360 1455 aa0.47□□□□□ -2.33
SYPL1-203ENST00000460770 C1orf167Q5SNV9 1468 aa0.47□□□□□ -2.33
SYPL1-203ENST00000460770 LRRC37A2A6NM11 1700 aa0.47□□□□□ -2.33
SYPL1-203ENST00000460770 MYOM1P52179 1685 aa0.46□□□□□ -2.34
SYPL1-203ENST00000460770 PTPRZ1P23471 2315 aaPredicted RBP0.46□□□□□ -2.34
SYPL1-203ENST00000460770 SPTY2D1-AS1A0A0U1RR47 76 aa0.46□□□□□ -2.34
SYPL1-203ENST00000460770 UMAD1C9J7I0 102 aa0.46□□□□□ -2.34
SYPL1-203ENST00000460770 C18orf32Q8TCD1 76 aa0.46□□□□□ -2.34
SYPL1-203ENST00000460770 NEXMIFQ5QGS0 1516 aa0.46□□□□□ -2.34
SYPL1-203ENST00000460770 TNCP24821 2201 aa0.46□□□□□ -2.34
SYPL1-203ENST00000460770 KIAA1551Q9HCM1 1747 aa0.46□□□□□ -2.34
SYPL1-203ENST00000460770 ANKRD26Q9UPS8 1709 aa0.46□□□□□ -2.34
SYPL1-203ENST00000460770 MED14O60244 1454 aa0.46□□□□□ -2.34
SYPL1-203ENST00000460770 ARHGAP35Q9NRY4 1499 aa0.46□□□□□ -2.34
SYPL1-203ENST00000460770 ANKRD36A6QL64 1941 aa0.46□□□□□ -2.34
SYPL1-203ENST00000460770 TPRP12270 2363 aaKnown RBP0.46□□□□□ -2.34
SYPL1-203ENST00000460770 CEP162Q5TB80 1403 aa0.46□□□□□ -2.34
SYPL1-203ENST00000460770 TTC28Q96AY4 2481 aa0.45□□□□□ -2.34
SYPL1-203ENST00000460770 DIP2CQ9Y2E4 1556 aa0.45□□□□□ -2.34
SYPL1-203ENST00000460770 SETBP1Q9Y6X0 1596 aa0.45□□□□□ -2.34
SYPL1-203ENST00000460770 TRAV21A0A0B4J279 112 aa0.45□□□□□ -2.34
SYPL1-203ENST00000460770 LINC00959A0A1B0GUT2 108 aa0.45□□□□□ -2.34
SYPL1-203ENST00000460770 H3BVH4 76 aa0.45□□□□□ -2.34
SYPL1-203ENST00000460770 IFI27P40305 119 aaPredicted RBP0.45□□□□□ -2.34
SYPL1-203ENST00000460770 SPINK6Q6UWN8 80 aa0.45□□□□□ -2.34
SYPL1-203ENST00000460770 FXYD6Q9H0Q3 95 aa0.45□□□□□ -2.34
SYPL1-203ENST00000460770 CCDC141Q6ZP82 1450 aa0.45□□□□□ -2.34
SYPL1-203ENST00000460770 NLRP1Q9C000 1473 aa0.45□□□□□ -2.34
SYPL1-203ENST00000460770 CLTCQ00610 1675 aaKnown RBP0.45□□□□□ -2.34
SYPL1-203ENST00000460770 RRBP1Q9P2E9 1410 aaKnown RBP0.45□□□□□ -2.34
SYPL1-203ENST00000460770 SCRIBQ14160 1630 aa0.45□□□□□ -2.34
SYPL1-203ENST00000460770 ARHGEF5Q12774 1597 aa0.45□□□□□ -2.34
SYPL1-203ENST00000460770 COL4A6Q14031 1691 aa0.44□□□□□ -2.34
SYPL1-203ENST00000460770 ERVK-7P63135 1459 aa0.44□□□□□ -2.34
SYPL1-203ENST00000460770 ABCA12Q86UK0 2595 aa0.44□□□□□ -2.34
SYPL1-203ENST00000460770 CPSF4LA6NMK7 179 aaKnown RBP0.44□□□□□ -2.34
SYPL1-203ENST00000460770 COX6B1P14854 86 aa0.44□□□□□ -2.34
SYPL1-203ENST00000460770 COX7BP24311 80 aa0.44□□□□□ -2.34
SYPL1-203ENST00000460770 ATP5EP2Q5VTU8 51 aa0.44□□□□□ -2.34
SYPL1-203ENST00000460770 PLAC8Q9NZF1 115 aa0.44□□□□□ -2.34
SYPL1-203ENST00000460770 LRP6O75581 1613 aa0.44□□□□□ -2.34
SYPL1-203ENST00000460770 RGPD4Q7Z3J3 1758 aa0.44□□□□□ -2.34
SYPL1-203ENST00000460770 KNDC1Q76NI1 1749 aa0.44□□□□□ -2.34
SYPL1-203ENST00000460770 CUX1P39880 1505 aa0.43□□□□□ -2.34
SYPL1-203ENST00000460770 KDM5DQ9BY66 1539 aa0.43□□□□□ -2.34
SYPL1-203ENST00000460770 SCN7AQ01118 1682 aa0.43□□□□□ -2.34
SYPL1-203ENST00000460770 IGF2RP11717 2491 aa0.43□□□□□ -2.34
SYPL1-203ENST00000460770 ANKRD17O75179 2603 aaKnown RBP0.43□□□□□ -2.34
SYPL1-203ENST00000460770 SPINK1P00995 79 aa0.43□□□□□ -2.34
SYPL1-203ENST00000460770 DEFB121Q5J5C9 76 aa0.43□□□□□ -2.34
SYPL1-203ENST00000460770 HEPN1Q6WQI6 88 aa0.43□□□□□ -2.34
SYPL1-203ENST00000460770 GNG13Q9P2W3 67 aa0.43□□□□□ -2.34
SYPL1-203ENST00000460770 ANKARQ7Z5J8 1434 aa0.43□□□□□ -2.34
SYPL1-203ENST00000460770 SUPT6HQ7KZ85 1726 aaKnown RBP0.43□□□□□ -2.34
SYPL1-203ENST00000460770 MON2Q7Z3U7 1717 aa0.43□□□□□ -2.34
SYPL1-203ENST00000460770 RGPD3A6NKT7 1758 aaPredicted RBP0.42□□□□□ -2.34
SYPL1-203ENST00000460770 MAGI2Q86UL8 1455 aa0.42□□□□□ -2.34
SYPL1-203ENST00000460770 I3L2K1 104 aa0.42□□□□□ -2.34
SYPL1-203ENST00000460770 K7EQZ3 153 aa0.42□□□□□ -2.34
SYPL1-203ENST00000460770 SPINK4O60575 86 aa0.42□□□□□ -2.34
SYPL1-203ENST00000460770 IFI6P09912 130 aa0.42□□□□□ -2.34
SYPL1-203ENST00000460770 APLNQ9ULZ1 77 aa0.42□□□□□ -2.34
SYPL1-203ENST00000460770 FBN2P35556 2912 aa0.42□□□□□ -2.34
SYPL1-203ENST00000460770 UBR3Q6ZT12 1888 aa0.41□□□□□ -2.34
SYPL1-203ENST00000460770 WNK2Q9Y3S1 2297 aa0.41□□□□□ -2.34
SYPL1-203ENST00000460770 NUP188Q5SRE5 1749 aa0.41□□□□□ -2.34
SYPL1-203ENST00000460770 GVINP1Q7Z2Y8 2422 aa0.41□□□□□ -2.34
SYPL1-203ENST00000460770 CCL22O00626 93 aa0.41□□□□□ -2.34
SYPL1-203ENST00000460770 HMGA1P17096 107 aaKnown RBP0.41□□□□□ -2.34
SYPL1-203ENST00000460770 SPRR1BP22528 89 aa0.41□□□□□ -2.34
SYPL1-203ENST00000460770 Q5BKY6 102 aa0.41□□□□□ -2.34
SYPL1-203ENST00000460770 DEFB123Q8N688 67 aa0.41□□□□□ -2.34
SYPL1-203ENST00000460770 ABCC1P33527 1531 aa0.41□□□□□ -2.34
SYPL1-203ENST00000460770 KCPQ6ZWJ8 1503 aa0.41□□□□□ -2.34
SYPL1-203ENST00000460770 KIF14Q15058 1648 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms