RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 CDIP1Q9H305 208 aa6.52□□□□□ -1.37
NUDCD3-203ENST00000460110 C2orf82Q6UX34 121 aa6.51□□□□□ -1.37
NUDCD3-203ENST00000460110 MDFIQ99750 246 aa6.51□□□□□ -1.37
NUDCD3-203ENST00000460110 TAL2Q16559 108 aa6.51□□□□□ -1.37
NUDCD3-203ENST00000460110 LINC00959A0A1B0GUT2 108 aa6.5□□□□□ -1.37
NUDCD3-203ENST00000460110 REG3AQ06141 175 aa6.5□□□□□ -1.37
NUDCD3-203ENST00000460110 LYRM7Q5U5X0 104 aa6.5□□□□□ -1.37
NUDCD3-203ENST00000460110 SMIM1B2RUZ4 78 aa6.5□□□□□ -1.37
NUDCD3-203ENST00000460110 CCDC179H3BU77 68 aa6.5□□□□□ -1.37
NUDCD3-203ENST00000460110 PRO1854Q9UHT4 67 aa6.5□□□□□ -1.37
NUDCD3-203ENST00000460110 TIRAPP58753 221 aa6.5□□□□□ -1.37
NUDCD3-203ENST00000460110 COX7B2Q8TF08 81 aa6.5□□□□□ -1.37
NUDCD3-203ENST00000460110 IFITM1P13164 125 aa6.49□□□□□ -1.37
NUDCD3-203ENST00000460110 CFC1BP0CG36 223 aa6.49□□□□□ -1.37
NUDCD3-203ENST00000460110 CFC1P0CG37 223 aa6.49□□□□□ -1.37
NUDCD3-203ENST00000460110 CHCHD10Q8WYQ3 142 aaPredicted RBP6.49□□□□□ -1.37
NUDCD3-203ENST00000460110 TEN1Q86WV5 123 aa6.48□□□□□ -1.37
NUDCD3-203ENST00000460110 NDUFV3P56181 108 aaKnown RBP6.48□□□□□ -1.37
NUDCD3-203ENST00000460110 MIR7-3HGQ8N6C7 128 aa6.48□□□□□ -1.37
NUDCD3-203ENST00000460110 TENM2Q9NT68 2774 aa6.48□□□□□ -1.37
NUDCD3-203ENST00000460110 EIF4EBP3O60516 100 aaPredicted RBP6.48□□□□□ -1.37
NUDCD3-203ENST00000460110 WFDC10BQ8IUB3 73 aa6.48□□□□□ -1.37
NUDCD3-203ENST00000460110 COX7A2LO14548 114 aa6.47□□□□□ -1.37
NUDCD3-203ENST00000460110 IGKV2D-24A0A075B6R9 120 aa6.47□□□□□ -1.37
NUDCD3-203ENST00000460110 CSDC2Q9Y534 153 aaKnown RBP6.47□□□□□ -1.37
NUDCD3-203ENST00000460110 PRO0461Q9UI25 63 aa6.46□□□□□ -1.37
NUDCD3-203ENST00000460110 C9JAW5 83 aa6.46□□□□□ -1.38
NUDCD3-203ENST00000460110 RPL13AP40429 203 aaKnown RBP6.46□□□□□ -1.38
NUDCD3-203ENST00000460110 HIGD2BQ4VC39 106 aa6.46□□□□□ -1.38
NUDCD3-203ENST00000460110 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.46□□□□□ -1.38
NUDCD3-203ENST00000460110 C9orf116Q5BN46 136 aaPredicted RBP6.46□□□□□ -1.38
NUDCD3-203ENST00000460110 ANKRD29Q8N6D5 301 aa6.45□□□□□ -1.38
NUDCD3-203ENST00000460110 LYPD5Q6UWN5 251 aa6.45□□□□□ -1.38
NUDCD3-203ENST00000460110 K7EIL1 84 aa6.45□□□□□ -1.38
NUDCD3-203ENST00000460110 NDUFA1O15239 70 aa6.45□□□□□ -1.38
NUDCD3-203ENST00000460110 MIAQ16674 131 aa6.45□□□□□ -1.38
NUDCD3-203ENST00000460110 LINC00612Q8N6U2 182 aa6.45□□□□□ -1.38
NUDCD3-203ENST00000460110 IGHV3OR16-9A0A0B4J2B5 98 aa6.44□□□□□ -1.38
NUDCD3-203ENST00000460110 COX6CP09669 75 aa6.44□□□□□ -1.38
NUDCD3-203ENST00000460110 SMCPP49901 116 aaPredicted RBP6.44□□□□□ -1.38
NUDCD3-203ENST00000460110 H7C423 109 aa6.44□□□□□ -1.38
NUDCD3-203ENST00000460110 LELP1Q5T871 98 aa6.44□□□□□ -1.38
NUDCD3-203ENST00000460110 CARD19Q96LW7 228 aa6.44□□□□□ -1.38
NUDCD3-203ENST00000460110 C6orf223Q8N319 242 aa6.43□□□□□ -1.38
NUDCD3-203ENST00000460110 LINC00308Q8TCZ7 52 aa6.43□□□□□ -1.38
NUDCD3-203ENST00000460110 M0QXV9 152 aa6.43□□□□□ -1.38
NUDCD3-203ENST00000460110 SND1-IT1Q9HBX3 110 aa6.43□□□□□ -1.38
NUDCD3-203ENST00000460110 SLC25A20O43772 301 aa6.43□□□□□ -1.38
NUDCD3-203ENST00000460110 TCL1BO95988 128 aa6.43□□□□□ -1.38
NUDCD3-203ENST00000460110 ESRGQ1W209 222 aa6.43□□□□□ -1.38
NUDCD3-203ENST00000460110 C15orf53Q8NAA6 179 aa6.43□□□□□ -1.38
NUDCD3-203ENST00000460110 CLEC2BQ92478 149 aa6.43□□□□□ -1.38
NUDCD3-203ENST00000460110 TRAV8-4A0A0B4J246 113 aa6.42□□□□□ -1.38
NUDCD3-203ENST00000460110 ZNF561-AS1K7EIQ3 104 aa6.42□□□□□ -1.38
NUDCD3-203ENST00000460110 LECT2O14960 151 aa6.42□□□□□ -1.38
NUDCD3-203ENST00000460110 SPAG11BQ08648 103 aa6.42□□□□□ -1.38
NUDCD3-203ENST00000460110 EGFEM1PQ0D2K5 195 aa6.42□□□□□ -1.38
NUDCD3-203ENST00000460110 PPDPFQ9H3Y8 114 aa6.42□□□□□ -1.38
NUDCD3-203ENST00000460110 NTN5Q8WTR8 489 aaPredicted RBP6.42□□□□□ -1.38
NUDCD3-203ENST00000460110 A0A087WZ39 114 aa6.42□□□□□ -1.38
NUDCD3-203ENST00000460110 IGLV5-39A0A0G2JS06 123 aa6.42□□□□□ -1.38
NUDCD3-203ENST00000460110 PRR3P79522 188 aaKnown RBP6.42□□□□□ -1.38
NUDCD3-203ENST00000460110 NHLRC4P0CG21 123 aaPredicted RBP6.41□□□□□ -1.38
NUDCD3-203ENST00000460110 UBE2DNLQ8IWF7 75 aa6.41□□□□□ -1.38
NUDCD3-203ENST00000460110 C1orf43Q9BWL3 253 aa6.41□□□□□ -1.38
NUDCD3-203ENST00000460110 A0A1B0GUV1 79 aa6.41□□□□□ -1.38
NUDCD3-203ENST00000460110 WIPF1O43516 503 aa6.41□□□□□ -1.38
NUDCD3-203ENST00000460110 CD164L2Q6UWJ8 174 aa6.41□□□□□ -1.38
NUDCD3-203ENST00000460110 IGLV5-45A0A087WSX0 123 aa6.4□□□□□ -1.38
NUDCD3-203ENST00000460110 UNQ6190/PRO20217Q6UXQ8 127 aa6.4□□□□□ -1.38
NUDCD3-203ENST00000460110 XAGE1AQ9HD64 81 aa6.4□□□□□ -1.38
NUDCD3-203ENST00000460110 SOSTDC1Q6X4U4 206 aa6.4□□□□□ -1.39
NUDCD3-203ENST00000460110 CCL18P55774 89 aa6.39□□□□□ -1.39
NUDCD3-203ENST00000460110 LITAFQ99732 161 aa6.39□□□□□ -1.39
NUDCD3-203ENST00000460110 TRIAP1O43715 76 aa6.39□□□□□ -1.39
NUDCD3-203ENST00000460110 COPS9Q8WXC6 57 aa6.39□□□□□ -1.39
NUDCD3-203ENST00000460110 CAMK2N2Q96S95 79 aa6.38□□□□□ -1.39
NUDCD3-203ENST00000460110 TRAV10A0A0B4J240 114 aa6.38□□□□□ -1.39
NUDCD3-203ENST00000460110 TEX49A0A1B0GTD5 131 aa6.38□□□□□ -1.39
NUDCD3-203ENST00000460110 NCR3O14931 201 aa6.37□□□□□ -1.39
NUDCD3-203ENST00000460110 C9orf153Q5TBE3 101 aa6.37□□□□□ -1.39
NUDCD3-203ENST00000460110 SPANXDQ9BXN6 97 aa6.37□□□□□ -1.39
NUDCD3-203ENST00000460110 SPANXCQ9NY87 97 aa6.37□□□□□ -1.39
NUDCD3-203ENST00000460110 S100A7L2Q5SY68 101 aa6.37□□□□□ -1.39
NUDCD3-203ENST00000460110 C10orf25Q5T742 122 aa6.37□□□□□ -1.39
NUDCD3-203ENST00000460110 ENHOQ6UWT2 76 aa6.37□□□□□ -1.39
NUDCD3-203ENST00000460110 A0A0B4J2C4 111 aa6.36□□□□□ -1.39
NUDCD3-203ENST00000460110 TGP01266 2768 aa6.36□□□□□ -1.39
NUDCD3-203ENST00000460110 ATXN8Q156A1 80 aa6.36□□□□□ -1.39
NUDCD3-203ENST00000460110 TMEM126AQ9H061 195 aa6.35□□□□□ -1.39
NUDCD3-203ENST00000460110 LOC107984640A0A0U1RRK4 108 aa6.35□□□□□ -1.39
NUDCD3-203ENST00000460110 PSCAO43653 123 aa6.35□□□□□ -1.39
NUDCD3-203ENST00000460110 IBA57-AS1B1ANH7 110 aa6.35□□□□□ -1.39
NUDCD3-203ENST00000460110 DNAL4O96015 105 aa6.34□□□□□ -1.39
NUDCD3-203ENST00000460110 C5orf47Q569G3 176 aa6.34□□□□□ -1.39
NUDCD3-203ENST00000460110 Q8IZM0 81 aa6.34□□□□□ -1.39
NUDCD3-203ENST00000460110 FAM236AA0A1B0GUQ0 79 aa6.33□□□□□ -1.4
NUDCD3-203ENST00000460110 FAM236BA0A1B0GV22 79 aa6.33□□□□□ -1.4
NUDCD3-203ENST00000460110 TIMM17BO60830 172 aa6.33□□□□□ -1.4
NUDCD3-203ENST00000460110 RPL18AQ02543 176 aaKnown RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms