RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 TRBV7-7A0A0K0K1E9 115 aa6.18□□□□□ -1.42
HDAC3-202ENST00000459727 A0A0U1RRA0 63 aa6.18□□□□□ -1.42
HDAC3-202ENST00000459727 PAX4O43316 350 aa6.18□□□□□ -1.42
HDAC3-202ENST00000459727 NDUFC2O95298 119 aa6.18□□□□□ -1.42
HDAC3-202ENST00000459727 ATP5G1P05496 136 aa6.18□□□□□ -1.42
HDAC3-202ENST00000459727 BAALC-AS2P0C853 105 aa6.18□□□□□ -1.42
HDAC3-202ENST00000459727 LINC00643Q86TS7 51 aa6.18□□□□□ -1.42
HDAC3-202ENST00000459727 LY6G6DO95868 133 aa6.17□□□□□ -1.42
HDAC3-202ENST00000459727 MIFP14174 115 aa6.17□□□□□ -1.42
HDAC3-202ENST00000459727 MALP21145 153 aa6.17□□□□□ -1.42
HDAC3-202ENST00000459727 NDUFV3P56181 108 aaKnown RBP6.17□□□□□ -1.42
HDAC3-202ENST00000459727 CFAP161Q6P656 301 aa6.17□□□□□ -1.42
HDAC3-202ENST00000459727 CD164L2Q6UWJ8 174 aa6.17□□□□□ -1.42
HDAC3-202ENST00000459727 X6R8D5 127 aa6.17□□□□□ -1.42
HDAC3-202ENST00000459727 NSD1Q96L73 2696 aaPredicted RBP6.17□□□□□ -1.42
HDAC3-202ENST00000459727 IGKV3OR2-268A0A0C4DH90 116 aa6.16□□□□□ -1.42
HDAC3-202ENST00000459727 CCL18P55774 89 aa6.16□□□□□ -1.42
HDAC3-202ENST00000459727 COL6A5A8TX70 2615 aa6.15□□□□□ -1.42
HDAC3-202ENST00000459727 ATRQ13535 2644 aa6.15□□□□□ -1.42
HDAC3-202ENST00000459727 IGKV2-28A0A075B6P5 120 aa6.15□□□□□ -1.42
HDAC3-202ENST00000459727 IGHV4-28A0A0C4DH34 117 aa6.15□□□□□ -1.42
HDAC3-202ENST00000459727 H3BQ85 93 aa6.15□□□□□ -1.42
HDAC3-202ENST00000459727 IGKV2D-28P01615 120 aa6.15□□□□□ -1.42
HDAC3-202ENST00000459727 DAD1P61803 113 aa6.15□□□□□ -1.42
HDAC3-202ENST00000459727 C5orf38Q86SI9 138 aa6.15□□□□□ -1.42
HDAC3-202ENST00000459727 LINC00337Q8N6G1 96 aa6.15□□□□□ -1.42
HDAC3-202ENST00000459727 SMIM11BQ8TCY0 68 aa6.15□□□□□ -1.42
HDAC3-202ENST00000459727 SPART-AS1P0CW21 52 aa6.14□□□□□ -1.43
HDAC3-202ENST00000459727 XCL1P47992 114 aa6.14□□□□□ -1.43
HDAC3-202ENST00000459727 ACANP16112 2415 aa6.14□□□□□ -1.43
HDAC3-202ENST00000459727 WIPF1O43516 503 aa6.13□□□□□ -1.43
HDAC3-202ENST00000459727 PFN2P35080 140 aa6.13□□□□□ -1.43
HDAC3-202ENST00000459727 LELP1Q5T871 98 aa6.13□□□□□ -1.43
HDAC3-202ENST00000459727 SDIM1Q6ZPB5 146 aa6.13□□□□□ -1.43
HDAC3-202ENST00000459727 TMEM126AQ9H061 195 aa6.13□□□□□ -1.43
HDAC3-202ENST00000459727 JMJD7-PLA2G4BH0Y9G9 81 aa6.12□□□□□ -1.43
HDAC3-202ENST00000459727 GHRHP01286 108 aa6.12□□□□□ -1.43
HDAC3-202ENST00000459727 FBN1P35555 2871 aaKnown RBP6.12□□□□□ -1.43
HDAC3-202ENST00000459727 ANK3Q12955 4377 aaKnown RBP6.12□□□□□ -1.43
HDAC3-202ENST00000459727 S100A7L2Q5SY68 101 aa6.12□□□□□ -1.43
HDAC3-202ENST00000459727 OR13C6PQ8NH95 151 aa6.12□□□□□ -1.43
HDAC3-202ENST00000459727 ORMDL1Q9P0S3 153 aa6.12□□□□□ -1.43
HDAC3-202ENST00000459727 ANGP03950 147 aaKnown RBP6.11□□□□□ -1.43
HDAC3-202ENST00000459727 KRTAP10-3P60369 221 aa6.11□□□□□ -1.43
HDAC3-202ENST00000459727 REG3AQ06141 175 aa6.11□□□□□ -1.43
HDAC3-202ENST00000459727 CHCHD10Q8WYQ3 142 aaPredicted RBP6.11□□□□□ -1.43
HDAC3-202ENST00000459727 OBSCN-AS1Q96MR7 158 aa6.11□□□□□ -1.43
HDAC3-202ENST00000459727 FAM218AQ96MZ4 157 aa6.11□□□□□ -1.43
HDAC3-202ENST00000459727 KLK5Q9Y337 293 aaPredicted RBP6.11□□□□□ -1.43
HDAC3-202ENST00000459727 SORL1Q92673 2214 aa6.11□□□□□ -1.43
HDAC3-202ENST00000459727 H3BNG1 76 aa6.1□□□□□ -1.43
HDAC3-202ENST00000459727 TMEM256-PLSCR3K7ERE1 68 aa6.1□□□□□ -1.43
HDAC3-202ENST00000459727 LINC00269Q8N2A0 174 aa6.1□□□□□ -1.43
HDAC3-202ENST00000459727 LINC00167Q96N53 147 aa6.1□□□□□ -1.43
HDAC3-202ENST00000459727 JMJD1CQ15652 2540 aa6.1□□□□□ -1.43
HDAC3-202ENST00000459727 LECT2O14960 151 aa6.09□□□□□ -1.43
HDAC3-202ENST00000459727 DEFB135Q30KP9 77 aa6.09□□□□□ -1.43
HDAC3-202ENST00000459727 ATP5EP2Q5VTU8 51 aa6.09□□□□□ -1.43
HDAC3-202ENST00000459727 GAGE2AQ6NT46 116 aa6.09□□□□□ -1.43
HDAC3-202ENST00000459727 Q8NAQ8 132 aa6.09□□□□□ -1.43
HDAC3-202ENST00000459727 WFDC9Q8NEX5 89 aa6.09□□□□□ -1.43
HDAC3-202ENST00000459727 MXRA5Q9NR99 2828 aa6.09□□□□□ -1.43
HDAC3-202ENST00000459727 CUBNO60494 3623 aa6.09□□□□□ -1.43
HDAC3-202ENST00000459727 A0A087WYN8 130 aa6.08□□□□□ -1.44
HDAC3-202ENST00000459727 GVQW2A0A096LPI5 108 aaPredicted RBP6.08□□□□□ -1.44
HDAC3-202ENST00000459727 A0A0J9YWU9 116 aa6.08□□□□□ -1.44
HDAC3-202ENST00000459727 F8WDY8 70 aa6.08□□□□□ -1.44
HDAC3-202ENST00000459727 IGHV4-30-4P0DP06 118 aa6.08□□□□□ -1.44
HDAC3-202ENST00000459727 KIAA0087Q14695 138 aa6.08□□□□□ -1.44
HDAC3-202ENST00000459727 PRR34Q9NV39 138 aa6.08□□□□□ -1.44
HDAC3-202ENST00000459727 FLNAP21333 2647 aaKnown RBP6.08□□□□□ -1.44
HDAC3-202ENST00000459727 NHLRC4P0CG21 123 aaPredicted RBP6.07□□□□□ -1.44
HDAC3-202ENST00000459727 SPAG11BQ08648 103 aa6.07□□□□□ -1.44
HDAC3-202ENST00000459727 Q6JHZ5 121 aa6.07□□□□□ -1.44
HDAC3-202ENST00000459727 Q9HAA7 133 aa6.07□□□□□ -1.44
HDAC3-202ENST00000459727 FN1P02751 2386 aaKnown RBP6.07□□□□□ -1.44
HDAC3-202ENST00000459727 CLPSL2Q6UWE3 100 aa6.06□□□□□ -1.44
HDAC3-202ENST00000459727 Q8N814 137 aa6.06□□□□□ -1.44
HDAC3-202ENST00000459727 C11orf68Q9H3H3 251 aaKnown RBP6.06□□□□□ -1.44
HDAC3-202ENST00000459727 C22orf24Q9Y442 160 aa6.06□□□□□ -1.44
HDAC3-202ENST00000459727 ATOX1O00244 68 aa6.05□□□□□ -1.44
HDAC3-202ENST00000459727 PDE6GP18545 87 aa6.05□□□□□ -1.44
HDAC3-202ENST00000459727 A0A096LPF7 62 aa6.04□□□□□ -1.44
HDAC3-202ENST00000459727 FAM236AA0A1B0GUQ0 79 aa6.04□□□□□ -1.44
HDAC3-202ENST00000459727 FAM236BA0A1B0GV22 79 aa6.04□□□□□ -1.44
HDAC3-202ENST00000459727 INAFM1C9JVW0 142 aa6.04□□□□□ -1.44
HDAC3-202ENST00000459727 CCKP06307 115 aa6.04□□□□□ -1.44
HDAC3-202ENST00000459727 SMR3AQ99954 134 aa6.04□□□□□ -1.44
HDAC3-202ENST00000459727 TRBV7-6A0A0J9YX20 115 aa6.03□□□□□ -1.44
HDAC3-202ENST00000459727 UQCRQO14949 82 aa6.03□□□□□ -1.44
HDAC3-202ENST00000459727 SMCR5Q8TEV8 140 aa6.03□□□□□ -1.44
HDAC3-202ENST00000459727 C14orf132Q9NPU4 83 aa6.03□□□□□ -1.44
HDAC3-202ENST00000459727 ZANQ9Y493 2812 aa6.02□□□□□ -1.45
HDAC3-202ENST00000459727 ZNF561-AS1K7EIQ3 104 aa6.02□□□□□ -1.45
HDAC3-202ENST00000459727 LINC00575Q6W349 94 aa6.02□□□□□ -1.45
HDAC3-202ENST00000459727 IGLV10-54A0A075B6I4 117 aa6.01□□□□□ -1.45
HDAC3-202ENST00000459727 TRBV10-3A0A0K0K1G6 114 aa6.01□□□□□ -1.45
HDAC3-202ENST00000459727 B5MCH6 92 aa6.01□□□□□ -1.45
HDAC3-202ENST00000459727 IGLV6-57P01721 117 aa6.01□□□□□ -1.45
HDAC3-202ENST00000459727 HTN3P15516 51 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms