RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 PCP2Q8IVA1 136 aa3.97□□□□□ -1.77
RNU1-88P-201ENST00000459274 CAMK2N2Q96S95 79 aa3.97□□□□□ -1.77
RNU1-88P-201ENST00000459274 VWFP04275 2813 aa3.96□□□□□ -1.78
RNU1-88P-201ENST00000459274 IGKV2D-26A0A0A0MRZ7 120 aa3.96□□□□□ -1.78
RNU1-88P-201ENST00000459274 IFITM1P13164 125 aa3.96□□□□□ -1.78
RNU1-88P-201ENST00000459274 SPAG11BQ08648 103 aa3.96□□□□□ -1.78
RNU1-88P-201ENST00000459274 MGAM2Q2M2H8 2515 aa3.95□□□□□ -1.78
RNU1-88P-201ENST00000459274 ANK3Q12955 4377 aaKnown RBP3.95□□□□□ -1.78
RNU1-88P-201ENST00000459274 IGLV5-39A0A0G2JS06 123 aa3.95□□□□□ -1.78
RNU1-88P-201ENST00000459274 NBDYA0A0U1RRE5 68 aa3.95□□□□□ -1.78
RNU1-88P-201ENST00000459274 TIMM17BO60830 172 aa3.95□□□□□ -1.78
RNU1-88P-201ENST00000459274 SNCGO76070 127 aa3.95□□□□□ -1.78
RNU1-88P-201ENST00000459274 SMIM13P0DJ93 91 aa3.95□□□□□ -1.78
RNU1-88P-201ENST00000459274 HINT1P49773 126 aaPredicted RBP3.95□□□□□ -1.78
RNU1-88P-201ENST00000459274 FOXI1Q12951 378 aa3.95□□□□□ -1.78
RNU1-88P-201ENST00000459274 RAB37Q96AX2 223 aa3.95□□□□□ -1.78
RNU1-88P-201ENST00000459274 ZNF625Q96I27 306 aaPredicted RBP3.95□□□□□ -1.78
RNU1-88P-201ENST00000459274 SPANXB1Q9NS25 103 aaPredicted RBP3.95□□□□□ -1.78
RNU1-88P-201ENST00000459274 NOTCH1P46531 2555 aa3.95□□□□□ -1.78
RNU1-88P-201ENST00000459274 A0A0J9YXY3 114 aa3.94□□□□□ -1.78
RNU1-88P-201ENST00000459274 TRBV30A0A0K0K1B3 111 aa3.94□□□□□ -1.78
RNU1-88P-201ENST00000459274 PFN2P35080 140 aa3.94□□□□□ -1.78
RNU1-88P-201ENST00000459274 COL5A1-AS1Q5SY13 56 aa3.94□□□□□ -1.78
RNU1-88P-201ENST00000459274 CASC10Q5T4H9 136 aa3.94□□□□□ -1.78
RNU1-88P-201ENST00000459274 CEND1Q8N111 149 aa3.94□□□□□ -1.78
RNU1-88P-201ENST00000459274 FAM104AQ969W3 186 aa3.94□□□□□ -1.78
RNU1-88P-201ENST00000459274 C2orf48Q96LS8 159 aa3.94□□□□□ -1.78
RNU1-88P-201ENST00000459274 ERG28Q9UKR5 140 aa3.94□□□□□ -1.78
RNU1-88P-201ENST00000459274 CBY1Q9Y3M2 126 aa3.94□□□□□ -1.78
RNU1-88P-201ENST00000459274 NBEAL2Q6ZNJ1 2754 aa3.94□□□□□ -1.78
RNU1-88P-201ENST00000459274 A0A0U1RRA0 63 aa3.93□□□□□ -1.78
RNU1-88P-201ENST00000459274 COX6CP09669 75 aa3.93□□□□□ -1.78
RNU1-88P-201ENST00000459274 SYCNQ0VAF6 134 aa3.93□□□□□ -1.78
RNU1-88P-201ENST00000459274 Q1RN00 199 aa3.93□□□□□ -1.78
RNU1-88P-201ENST00000459274 C1orf134Q5TEV5 83 aa3.93□□□□□ -1.78
RNU1-88P-201ENST00000459274 LYRM7Q5U5X0 104 aa3.93□□□□□ -1.78
RNU1-88P-201ENST00000459274 MAPKAPK5-AS1Q8N8E1 139 aa3.93□□□□□ -1.78
RNU1-88P-201ENST00000459274 TTTY13Q9BZ97 58 aa3.93□□□□□ -1.78
RNU1-88P-201ENST00000459274 USP17L23D6RBM5 183 aa3.92□□□□□ -1.78
RNU1-88P-201ENST00000459274 M0R2N4 97 aa3.92□□□□□ -1.78
RNU1-88P-201ENST00000459274 HIGD2BQ4VC39 106 aa3.92□□□□□ -1.78
RNU1-88P-201ENST00000459274 C6orf223Q8N319 242 aa3.92□□□□□ -1.78
RNU1-88P-201ENST00000459274 DPH3Q96FX2 82 aa3.92□□□□□ -1.78
RNU1-88P-201ENST00000459274 SPANXDQ9BXN6 97 aa3.92□□□□□ -1.78
RNU1-88P-201ENST00000459274 SPANXCQ9NY87 97 aa3.92□□□□□ -1.78
RNU1-88P-201ENST00000459274 GVQW2A0A096LPI5 108 aaPredicted RBP3.91□□□□□ -1.78
RNU1-88P-201ENST00000459274 PSMB2P49721 201 aa3.91□□□□□ -1.78
RNU1-88P-201ENST00000459274 RNF151Q2KHN1 245 aa3.91□□□□□ -1.78
RNU1-88P-201ENST00000459274 C2orf82Q6UX34 121 aa3.91□□□□□ -1.78
RNU1-88P-201ENST00000459274 MUSTN1Q8IVN3 82 aa3.91□□□□□ -1.78
RNU1-88P-201ENST00000459274 NTN5Q8WTR8 489 aaPredicted RBP3.91□□□□□ -1.78
RNU1-88P-201ENST00000459274 CARD19Q96LW7 228 aa3.91□□□□□ -1.78
RNU1-88P-201ENST00000459274 NHP2Q9NX24 153 aaKnown RBP3.91□□□□□ -1.78
RNU1-88P-201ENST00000459274 TP73-AS1Q9UF72 201 aa3.91□□□□□ -1.78
RNU1-88P-201ENST00000459274 PKD1L1Q8TDX9 2849 aa3.9□□□□□ -1.78
RNU1-88P-201ENST00000459274 TRAV13-2A0A0B4J235 113 aa3.9□□□□□ -1.79
RNU1-88P-201ENST00000459274 SCGB1C2P0DMR2 95 aa3.9□□□□□ -1.79
RNU1-88P-201ENST00000459274 TSPEAR-AS2P59090 65 aa3.9□□□□□ -1.79
RNU1-88P-201ENST00000459274 NPC2P61916 151 aa3.9□□□□□ -1.79
RNU1-88P-201ENST00000459274 VAMP3Q15836 100 aa3.9□□□□□ -1.79
RNU1-88P-201ENST00000459274 S100A7L2Q5SY68 101 aa3.9□□□□□ -1.79
RNU1-88P-201ENST00000459274 BVES-AS1Q5T3Y7 98 aa3.9□□□□□ -1.79
RNU1-88P-201ENST00000459274 UNQ6190/PRO20217Q6UXQ8 127 aa3.9□□□□□ -1.79
RNU1-88P-201ENST00000459274 C2orf91Q6ZV80 131 aa3.9□□□□□ -1.79
RNU1-88P-201ENST00000459274 MIR7-3HGQ8N6C7 128 aa3.9□□□□□ -1.79
RNU1-88P-201ENST00000459274 OR13C6PQ8NH95 151 aa3.9□□□□□ -1.79
RNU1-88P-201ENST00000459274 SND1-IT1Q9HBX3 110 aa3.9□□□□□ -1.79
RNU1-88P-201ENST00000459274 PRO1854Q9UHT4 67 aa3.9□□□□□ -1.79
RNU1-88P-201ENST00000459274 LOC107984640A0A0U1RRK4 108 aa3.89□□□□□ -1.79
RNU1-88P-201ENST00000459274 RPL18AQ02543 176 aaKnown RBP3.89□□□□□ -1.79
RNU1-88P-201ENST00000459274 NKAPP1Q8N9T2 125 aa3.89□□□□□ -1.79
RNU1-88P-201ENST00000459274 LINC00308Q8TCZ7 52 aa3.89□□□□□ -1.79
RNU1-88P-201ENST00000459274 LINC00476Q8WZB0 136 aa3.89□□□□□ -1.79
RNU1-88P-201ENST00000459274 PPDPFQ9H3Y8 114 aa3.89□□□□□ -1.79
RNU1-88P-201ENST00000459274 LINC00474Q9P2X8 69 aa3.89□□□□□ -1.79
RNU1-88P-201ENST00000459274 A4D1N5 150 aa3.88□□□□□ -1.79
RNU1-88P-201ENST00000459274 NDUFC2-KCTD14E9PQ53 114 aa3.88□□□□□ -1.79
RNU1-88P-201ENST00000459274 LECT2O14960 151 aa3.88□□□□□ -1.79
RNU1-88P-201ENST00000459274 GAGE2EQ4V326 116 aa3.88□□□□□ -1.79
RNU1-88P-201ENST00000459274 GTF2H5Q6ZYL4 71 aa3.88□□□□□ -1.79
RNU1-88P-201ENST00000459274 DAND5Q8N907 189 aa3.88□□□□□ -1.79
RNU1-88P-201ENST00000459274 SNHG12Q9BXW3 62 aa3.88□□□□□ -1.79
RNU1-88P-201ENST00000459274 GAGE2DQ9UEU5 116 aa3.88□□□□□ -1.79
RNU1-88P-201ENST00000459274 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.87□□□□□ -1.79
RNU1-88P-201ENST00000459274 A0A0B4J2C4 111 aa3.87□□□□□ -1.79
RNU1-88P-201ENST00000459274 LOC107984156A0A0G2JMH3 177 aa3.87□□□□□ -1.79
RNU1-88P-201ENST00000459274 H7C2G1 150 aa3.87□□□□□ -1.79
RNU1-88P-201ENST00000459274 NDUFC2O95298 119 aa3.87□□□□□ -1.79
RNU1-88P-201ENST00000459274 FABP2P12104 132 aa3.87□□□□□ -1.79
RNU1-88P-201ENST00000459274 GAGE2BQ13066 116 aa3.87□□□□□ -1.79
RNU1-88P-201ENST00000459274 KIAA0087Q14695 138 aa3.87□□□□□ -1.79
RNU1-88P-201ENST00000459274 Q6ZRU5 148 aa3.87□□□□□ -1.79
RNU1-88P-201ENST00000459274 ARL17AQ8IVW1 177 aa3.87□□□□□ -1.79
RNU1-88P-201ENST00000459274 C15orf56Q8N910 161 aa3.87□□□□□ -1.79
RNU1-88P-201ENST00000459274 LINC00526Q96FQ7 95 aa3.87□□□□□ -1.79
RNU1-88P-201ENST00000459274 TMEM126AQ9H061 195 aa3.87□□□□□ -1.79
RNU1-88P-201ENST00000459274 NBEAL1Q6ZS30 2694 aa3.86□□□□□ -1.79
RNU1-88P-201ENST00000459274 GHRHP01286 108 aa3.86□□□□□ -1.79
RNU1-88P-201ENST00000459274 CFC1BP0CG36 223 aa3.86□□□□□ -1.79
RNU1-88P-201ENST00000459274 CFC1P0CG37 223 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms