RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 COL5A1P20908 1838 aaPredicted RBP13.96□□□□□ -0.17
SNX27-204ENST00000458013 CPAMD8Q8IZJ3 1885 aa13.96□□□□□ -0.18
SNX27-204ENST00000458013 TRBV7-7A0A0K0K1E9 115 aa13.95□□□□□ -0.18
SNX27-204ENST00000458013 HCG22E2RYF7 251 aa13.94□□□□□ -0.18
SNX27-204ENST00000458013 CNFNQ9BYD5 112 aa13.94□□□□□ -0.18
SNX27-204ENST00000458013 PLXNB1O43157 2135 aa13.94□□□□□ -0.18
SNX27-204ENST00000458013 SMIM26A0A096LP01 95 aa13.94□□□□□ -0.18
SNX27-204ENST00000458013 Q6ZRU5 148 aa13.93□□□□□ -0.18
SNX27-204ENST00000458013 LYPD5Q6UWN5 251 aa13.92□□□□□ -0.18
SNX27-204ENST00000458013 IGLV1-51P01701 117 aa13.92□□□□□ -0.18
SNX27-204ENST00000458013 A0A1W2PPR1 153 aa13.91□□□□□ -0.18
SNX27-204ENST00000458013 WNK1Q9H4A3 2382 aa13.89□□□□□ -0.19
SNX27-204ENST00000458013 A0A096LNJ9 63 aa13.89□□□□□ -0.19
SNX27-204ENST00000458013 AMELXQ99217 191 aa13.88□□□□□ -0.19
SNX27-204ENST00000458013 LINC00846Q9NV44 126 aa13.88□□□□□ -0.19
SNX27-204ENST00000458013 IGKV2D-30A0A075B6S6 120 aa13.87□□□□□ -0.19
SNX27-204ENST00000458013 IGKV2-30P06310 120 aa13.87□□□□□ -0.19
SNX27-204ENST00000458013 C1orf134Q5TEV5 83 aa13.86□□□□□ -0.19
SNX27-204ENST00000458013 C2orf48Q96LS8 159 aa13.86□□□□□ -0.19
SNX27-204ENST00000458013 SMIM29Q86T20 159 aa13.85□□□□□ -0.19
SNX27-204ENST00000458013 LRP4O75096 1905 aa13.84□□□□□ -0.19
SNX27-204ENST00000458013 C7orf65Q6ZTY9 151 aa13.83□□□□□ -0.19
SNX27-204ENST00000458013 PRO3102Q9H379 93 aa13.83□□□□□ -0.19
SNX27-204ENST00000458013 ADAMTS20P59510 1910 aa13.83□□□□□ -0.2
SNX27-204ENST00000458013 LINC00337Q8N6G1 96 aa13.82□□□□□ -0.2
SNX27-204ENST00000458013 SMCR5Q8TEV8 140 aa13.82□□□□□ -0.2
SNX27-204ENST00000458013 C22orf24Q9Y442 160 aa13.82□□□□□ -0.2
SNX27-204ENST00000458013 HIVEP2P31629 2446 aa13.82□□□□□ -0.2
SNX27-204ENST00000458013 KIAA0087Q14695 138 aa13.81□□□□□ -0.2
SNX27-204ENST00000458013 PTPRQQ9UMZ3 2332 aa13.8□□□□□ -0.2
SNX27-204ENST00000458013 SORL1Q92673 2214 aa13.78□□□□□ -0.2
SNX27-204ENST00000458013 FAM208BQ5VWN6 2430 aa13.78□□□□□ -0.2
SNX27-204ENST00000458013 SPACA4Q8TDM5 124 aa13.78□□□□□ -0.2
SNX27-204ENST00000458013 CHTF8P0CG12 524 aa13.77□□□□□ -0.2
SNX27-204ENST00000458013 C1orf64Q8NEQ6 169 aa13.77□□□□□ -0.2
SNX27-204ENST00000458013 TMEM254Q8TBM7 123 aa13.76□□□□□ -0.21
SNX27-204ENST00000458013 MUC7Q8TAX7 377 aa13.76□□□□□ -0.21
SNX27-204ENST00000458013 C16orf95Q9H693 158 aa13.74□□□□□ -0.21
SNX27-204ENST00000458013 AGRNO00468 2067 aa13.74□□□□□ -0.21
SNX27-204ENST00000458013 MOBPQ13875 183 aa13.72□□□□□ -0.21
SNX27-204ENST00000458013 IGLV8-61A0A075B6I0 122 aa13.72□□□□□ -0.21
SNX27-204ENST00000458013 TET2Q6N021 2002 aaPredicted RBP13.71□□□□□ -0.21
SNX27-204ENST00000458013 CSDC2Q9Y534 153 aaKnown RBP13.7□□□□□ -0.22
SNX27-204ENST00000458013 PLA2G1BP04054 148 aaKnown RBP13.7□□□□□ -0.22
SNX27-204ENST00000458013 OTOGLQ3ZCN5 2332 aa13.7□□□□□ -0.22
SNX27-204ENST00000458013 MUC6Q6W4X9 2439 aa13.7□□□□□ -0.22
SNX27-204ENST00000458013 Q8N2B8 174 aa13.69□□□□□ -0.22
SNX27-204ENST00000458013 SPATA3Q8NHX4 192 aa13.69□□□□□ -0.22
SNX27-204ENST00000458013 RPL37AP61513 92 aaKnown RBP13.68□□□□□ -0.22
SNX27-204ENST00000458013 MDFIQ99750 246 aa13.68□□□□□ -0.22
SNX27-204ENST00000458013 PRRC2AP48634 2157 aaKnown RBP13.68□□□□□ -0.22
SNX27-204ENST00000458013 FHL3Q13643 280 aa13.68□□□□□ -0.22
SNX27-204ENST00000458013 A0A1B0GUV1 79 aa13.67□□□□□ -0.22
SNX27-204ENST00000458013 CDIP1Q9H305 208 aa13.67□□□□□ -0.22
SNX27-204ENST00000458013 PHF5AQ7RTV0 110 aaKnown RBP13.67□□□□□ -0.22
SNX27-204ENST00000458013 FAM218AQ96MZ4 157 aa13.66□□□□□ -0.22
SNX27-204ENST00000458013 FSHBP01225 129 aa13.66□□□□□ -0.22
SNX27-204ENST00000458013 CREBBPQ92793 2442 aa13.66□□□□□ -0.22
SNX27-204ENST00000458013 SPAG11AQ6PDA7 123 aa13.65□□□□□ -0.22
SNX27-204ENST00000458013 C4orf26Q17RF5 130 aa13.65□□□□□ -0.22
SNX27-204ENST00000458013 LINC00167Q96N53 147 aa13.63□□□□□ -0.23
SNX27-204ENST00000458013 C11orf72Q8NBR9 251 aa13.63□□□□□ -0.23
SNX27-204ENST00000458013 C6orf48Q9UBA6 75 aa13.63□□□□□ -0.23
SNX27-204ENST00000458013 A0A1B0GU69 56 aa13.62□□□□□ -0.23
SNX27-204ENST00000458013 LIMD2Q9BT23 127 aa13.61□□□□□ -0.23
SNX27-204ENST00000458013 ST20-AS1Q8NBB2 130 aa13.6□□□□□ -0.23
SNX27-204ENST00000458013 KIF25-AS1Q9Y6Z4 181 aa13.58□□□□□ -0.24
SNX27-204ENST00000458013 CUL9Q8IWT3 2517 aa13.58□□□□□ -0.24
SNX27-204ENST00000458013 hDV103S1A0JD37 113 aa13.57□□□□□ -0.24
SNX27-204ENST00000458013 COX8CQ7Z4L0 72 aa13.57□□□□□ -0.24
SNX27-204ENST00000458013 CXCL6P80162 114 aa13.57□□□□□ -0.24
SNX27-204ENST00000458013 SMCPP49901 116 aaPredicted RBP13.56□□□□□ -0.24
SNX27-204ENST00000458013 F8WDY8 70 aa13.51□□□□□ -0.25
SNX27-204ENST00000458013 IGLV5-39A0A0G2JS06 123 aa13.5□□□□□ -0.25
SNX27-204ENST00000458013 FAM168BA1KXE4 195 aa13.5□□□□□ -0.25
SNX27-204ENST00000458013 LINC00476Q8WZB0 136 aa13.49□□□□□ -0.25
SNX27-204ENST00000458013 HIVEP3Q5T1R4 2406 aa13.49□□□□□ -0.25
SNX27-204ENST00000458013 CSPG4Q6UVK1 2322 aa13.48□□□□□ -0.25
SNX27-204ENST00000458013 LINC01561Q8N1V8 128 aa13.48□□□□□ -0.25
SNX27-204ENST00000458013 COL27A1Q8IZC6 1860 aaPredicted RBP13.48□□□□□ -0.25
SNX27-204ENST00000458013 IGHV3OR16-9A0A0B4J2B5 98 aa13.47□□□□□ -0.25
SNX27-204ENST00000458013 LINC00315P59091 139 aa13.47□□□□□ -0.25
SNX27-204ENST00000458013 SPG11Q96JI7 2443 aa13.46□□□□□ -0.25
SNX27-204ENST00000458013 NAV3Q8IVL0 2385 aa13.46□□□□□ -0.25
SNX27-204ENST00000458013 RTL8CO15255 209 aa13.46□□□□□ -0.25
SNX27-204ENST00000458013 EPM2AB3EWF7 344 aa13.46□□□□□ -0.25
SNX27-204ENST00000458013 ACYP2P14621 99 aa13.45□□□□□ -0.26
SNX27-204ENST00000458013 TM2D3Q9BRN9 247 aa13.45□□□□□ -0.26
SNX27-204ENST00000458013 LINC01546A6NGU7 62 aa13.44□□□□□ -0.26
SNX27-204ENST00000458013 Q96NJ1 140 aa13.44□□□□□ -0.26
SNX27-204ENST00000458013 PTPRBP23467 1997 aa13.44□□□□□ -0.26
SNX27-204ENST00000458013 ELOF1P60002 83 aaKnown RBP13.44□□□□□ -0.26
SNX27-204ENST00000458013 PTPN13Q12923 2485 aa13.43□□□□□ -0.26
SNX27-204ENST00000458013 SERTAD4-AS1Q5TG53 156 aa13.43□□□□□ -0.26
SNX27-204ENST00000458013 FAM19A4Q96LR4 140 aa13.43□□□□□ -0.26
SNX27-204ENST00000458013 LINC00313P59037 77 aa13.43□□□□□ -0.26
SNX27-204ENST00000458013 Q6ZQT0 140 aa13.43□□□□□ -0.26
SNX27-204ENST00000458013 ANKHD1Q8IWZ3 2542 aaKnown RBP13.41□□□□□ -0.26
SNX27-204ENST00000458013 TYMSOSQ8TAI1 123 aa13.4□□□□□ -0.26
SNX27-204ENST00000458013 SPINT4Q6UDR6 99 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms