RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 TCTE3Q8IZS6 198 aa8.42□□□□□ -1.06
UPF3AP2-201ENST00000457924 A0A1B0GW15 77 aa8.41□□□□□ -1.06
UPF3AP2-201ENST00000457924 D6R8Y8 96 aa8.41□□□□□ -1.06
UPF3AP2-201ENST00000457924 PRSS2P07478 247 aa8.41□□□□□ -1.06
UPF3AP2-201ENST00000457924 ALKAL2Q6UX46 152 aa8.41□□□□□ -1.06
UPF3AP2-201ENST00000457924 LINC00469Q8N7U9 141 aa8.41□□□□□ -1.06
UPF3AP2-201ENST00000457924 RAB5AP20339 215 aa8.4□□□□□ -1.06
UPF3AP2-201ENST00000457924 CKS1BP61024 79 aa8.4□□□□□ -1.06
UPF3AP2-201ENST00000457924 LINC01561Q8N1V8 128 aa8.4□□□□□ -1.06
UPF3AP2-201ENST00000457924 TMEM141Q96I45 108 aa8.4□□□□□ -1.06
UPF3AP2-201ENST00000457924 PYGO1Q9Y3Y4 419 aa8.4□□□□□ -1.06
UPF3AP2-201ENST00000457924 IGLV4-3A0A075B6K6 122 aa8.39□□□□□ -1.07
UPF3AP2-201ENST00000457924 SMIM27A0A1W2PRY6 76 aa8.39□□□□□ -1.07
UPF3AP2-201ENST00000457924 BCE1O60756 84 aa8.39□□□□□ -1.07
UPF3AP2-201ENST00000457924 NPYP01303 97 aa8.39□□□□□ -1.07
UPF3AP2-201ENST00000457924 SRP19P09132 144 aaKnown RBP8.39□□□□□ -1.07
UPF3AP2-201ENST00000457924 XAGE1AQ9HD64 81 aa8.39□□□□□ -1.07
UPF3AP2-201ENST00000457924 F8W036 122 aa8.38□□□□□ -1.07
UPF3AP2-201ENST00000457924 S100A8P05109 93 aa8.38□□□□□ -1.07
UPF3AP2-201ENST00000457924 C6orf226Q5I0X4 101 aa8.38□□□□□ -1.07
UPF3AP2-201ENST00000457924 Q6ZN92 141 aa8.38□□□□□ -1.07
UPF3AP2-201ENST00000457924 TEX43Q6ZNM6 134 aa8.38□□□□□ -1.07
UPF3AP2-201ENST00000457924 MRPL55Q7Z7F7 128 aaKnown RBP8.38□□□□□ -1.07
UPF3AP2-201ENST00000457924 RETNLBQ9BQ08 111 aa8.38□□□□□ -1.07
UPF3AP2-201ENST00000457924 C2orf88Q9BSF0 95 aa8.38□□□□□ -1.07
UPF3AP2-201ENST00000457924 TOMM7Q9P0U1 55 aa8.38□□□□□ -1.07
UPF3AP2-201ENST00000457924 TP73-AS1Q9UF72 201 aa8.38□□□□□ -1.07
UPF3AP2-201ENST00000457924 PPBPP02775 128 aa8.37□□□□□ -1.07
UPF3AP2-201ENST00000457924 RPL23P62829 140 aaKnown RBP8.36□□□□□ -1.07
UPF3AP2-201ENST00000457924 ADIRFQ15847 76 aa8.35□□□□□ -1.07
UPF3AP2-201ENST00000457924 TPRXLQ17RH7 258 aa8.35□□□□□ -1.07
UPF3AP2-201ENST00000457924 MRPL54Q6P161 138 aaKnown RBP8.35□□□□□ -1.07
UPF3AP2-201ENST00000457924 Q8IZM0 81 aa8.35□□□□□ -1.07
UPF3AP2-201ENST00000457924 ALKBH7Q9BT30 221 aaPredicted RBP8.35□□□□□ -1.07
UPF3AP2-201ENST00000457924 ANAPC11Q9NYG5 84 aa8.35□□□□□ -1.07
UPF3AP2-201ENST00000457924 ORMDL3Q8N138 153 aa8.34□□□□□ -1.07
UPF3AP2-201ENST00000457924 LINC00304Q8N9R0 145 aa8.34□□□□□ -1.07
UPF3AP2-201ENST00000457924 IGLV7-46A0A075B6I9 117 aa8.33□□□□□ -1.08
UPF3AP2-201ENST00000457924 RPL37AP8A6NKH3 93 aa8.33□□□□□ -1.08
UPF3AP2-201ENST00000457924 KRTAP13-2Q52LG2 175 aa8.33□□□□□ -1.08
UPF3AP2-201ENST00000457924 LINC00173Q6ZV60 143 aa8.33□□□□□ -1.08
UPF3AP2-201ENST00000457924 LINC00167Q96N53 147 aa8.33□□□□□ -1.08
UPF3AP2-201ENST00000457924 F8VRH5 84 aa8.32□□□□□ -1.08
UPF3AP2-201ENST00000457924 FAM229BQ4G0N7 80 aa8.32□□□□□ -1.08
UPF3AP2-201ENST00000457924 ZC2HC1BQ5TFG8 222 aa8.32□□□□□ -1.08
UPF3AP2-201ENST00000457924 TMEM136Q6ZRR5 245 aa8.32□□□□□ -1.08
UPF3AP2-201ENST00000457924 PRELID3AQ96N28 172 aa8.32□□□□□ -1.08
UPF3AP2-201ENST00000457924 VCX2Q9H322 139 aa8.32□□□□□ -1.08
UPF3AP2-201ENST00000457924 NAT8Q9UHE5 227 aa8.32□□□□□ -1.08
UPF3AP2-201ENST00000457924 MUC17Q685J3 4493 aa8.32□□□□□ -1.08
UPF3AP2-201ENST00000457924 A0A1B0GXF2 115 aa8.31□□□□□ -1.08
UPF3AP2-201ENST00000457924 UBE2AP49459 152 aa8.31□□□□□ -1.08
UPF3AP2-201ENST00000457924 AMELXQ99217 191 aa8.31□□□□□ -1.08
UPF3AP2-201ENST00000457924 CYSLTR1Q9Y271 337 aa8.31□□□□□ -1.08
UPF3AP2-201ENST00000457924 LOC389332A0A1B0GUA5 103 aa8.3□□□□□ -1.08
UPF3AP2-201ENST00000457924 C2orf66Q6UXQ4 117 aa8.3□□□□□ -1.08
UPF3AP2-201ENST00000457924 IGKV2D-26A0A0A0MRZ7 120 aa8.29□□□□□ -1.08
UPF3AP2-201ENST00000457924 GAGE10A6NGK3 116 aa8.29□□□□□ -1.08
UPF3AP2-201ENST00000457924 PRSS47A8MTI9 375 aa8.29□□□□□ -1.08
UPF3AP2-201ENST00000457924 CXCL5P42830 114 aa8.29□□□□□ -1.08
UPF3AP2-201ENST00000457924 SEC11AP67812 179 aa8.29□□□□□ -1.08
UPF3AP2-201ENST00000457924 FAM19A3Q7Z5A8 133 aa8.29□□□□□ -1.08
UPF3AP2-201ENST00000457924 NPSP0C0P6 89 aa8.28□□□□□ -1.08
UPF3AP2-201ENST00000457924 HERVK_113P63121 156 aa8.28□□□□□ -1.08
UPF3AP2-201ENST00000457924 CTAG1AP78358 180 aa8.28□□□□□ -1.08
UPF3AP2-201ENST00000457924 KRTAP13-1Q8IUC0 172 aa8.28□□□□□ -1.08
UPF3AP2-201ENST00000457924 MAP1LC3AQ9H492 121 aa8.28□□□□□ -1.08
UPF3AP2-201ENST00000457924 LAMTOR2Q9Y2Q5 125 aa8.28□□□□□ -1.08
UPF3AP2-201ENST00000457924 GEMIN7Q9H840 131 aaKnown RBP8.27□□□□□ -1.09
UPF3AP2-201ENST00000457924 CDKN2A-AS1Q9UH64 79 aa8.27□□□□□ -1.09
UPF3AP2-201ENST00000457924 PNRC1Q12796 327 aaPredicted RBP8.26□□□□□ -1.09
UPF3AP2-201ENST00000457924 KRTAP15-1Q3LI76 137 aa8.26□□□□□ -1.09
UPF3AP2-201ENST00000457924 ORMDL2Q53FV1 153 aa8.26□□□□□ -1.09
UPF3AP2-201ENST00000457924 ATP5L2Q7Z4Y8 100 aa8.26□□□□□ -1.09
UPF3AP2-201ENST00000457924 Q8N8P6 123 aa8.26□□□□□ -1.09
UPF3AP2-201ENST00000457924 NKAPP1Q8N9T2 125 aa8.26□□□□□ -1.09
UPF3AP2-201ENST00000457924 PPDPFQ9H3Y8 114 aa8.26□□□□□ -1.09
UPF3AP2-201ENST00000457924 IGIPA6NJ69 53 aa8.25□□□□□ -1.09
UPF3AP2-201ENST00000457924 PAPPA-AS1Q5QFB9 102 aa8.25□□□□□ -1.09
UPF3AP2-201ENST00000457924 AKAP14Q86UN6 197 aa8.25□□□□□ -1.09
UPF3AP2-201ENST00000457924 IGLV5-37A0A075B6J1 123 aa8.24□□□□□ -1.09
UPF3AP2-201ENST00000457924 C9JQL5 133 aa8.24□□□□□ -1.09
UPF3AP2-201ENST00000457924 K7EMI3 77 aa8.23□□□□□ -1.09
UPF3AP2-201ENST00000457924 PEA15Q15121 130 aa8.23□□□□□ -1.09
UPF3AP2-201ENST00000457924 IGKV2-28A0A075B6P5 120 aa8.22□□□□□ -1.09
UPF3AP2-201ENST00000457924 IGKV2D-28P01615 120 aa8.22□□□□□ -1.09
UPF3AP2-201ENST00000457924 LINC01547P58512 204 aaPredicted RBP8.22□□□□□ -1.09
UPF3AP2-201ENST00000457924 RAB5BP61020 215 aa8.22□□□□□ -1.09
UPF3AP2-201ENST00000457924 COX7B2Q8TF08 81 aa8.22□□□□□ -1.09
UPF3AP2-201ENST00000457924 FSIP2Q5CZC0 6907 aa8.21□□□□□ -1.09
UPF3AP2-201ENST00000457924 SMIM1B2RUZ4 78 aa8.21□□□□□ -1.1
UPF3AP2-201ENST00000457924 PRLHP81277 87 aa8.21□□□□□ -1.1
UPF3AP2-201ENST00000457924 PDZD11Q5EBL8 140 aa8.21□□□□□ -1.1
UPF3AP2-201ENST00000457924 TRIAP1O43715 76 aa8.2□□□□□ -1.1
UPF3AP2-201ENST00000457924 G0S2P27469 103 aa8.2□□□□□ -1.1
UPF3AP2-201ENST00000457924 FAM19A1Q7Z5A9 133 aa8.2□□□□□ -1.1
UPF3AP2-201ENST00000457924 LINC00337Q8N6G1 96 aa8.2□□□□□ -1.1
UPF3AP2-201ENST00000457924 TIMM17AQ99595 171 aa8.2□□□□□ -1.1
UPF3AP2-201ENST00000457924 SPAG11AQ6PDA7 123 aa8.19□□□□□ -1.1
UPF3AP2-201ENST00000457924 NXT2Q9NPJ8 142 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms