RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 IGHV3-64A0A075B6Q5 118 aa6□□□□□ -1.45
CDC42EP3-204ENST00000457889 GAGE12HA6NDE8 117 aa6□□□□□ -1.45
CDC42EP3-204ENST00000457889 TMEM238C9JI98 176 aa6□□□□□ -1.45
CDC42EP3-204ENST00000457889 F8WDY8 70 aa6□□□□□ -1.45
CDC42EP3-204ENST00000457889 PRSS2P07478 247 aa6□□□□□ -1.45
CDC42EP3-204ENST00000457889 Q6ZVH6 145 aa6□□□□□ -1.45
CDC42EP3-204ENST00000457889 C5orf38Q86SI9 138 aa6□□□□□ -1.45
CDC42EP3-204ENST00000457889 COX7B2Q8TF08 81 aa6□□□□□ -1.45
CDC42EP3-204ENST00000457889 SPANXB1Q9NS25 103 aaPredicted RBP6□□□□□ -1.45
CDC42EP3-204ENST00000457889 IGLV10-54A0A075B6I4 117 aa5.99□□□□□ -1.45
CDC42EP3-204ENST00000457889 CTAG1AP78358 180 aa5.99□□□□□ -1.45
CDC42EP3-204ENST00000457889 CIRBPQ14011 172 aaKnown RBP5.99□□□□□ -1.45
CDC42EP3-204ENST00000457889 LBHQ53QV2 105 aaPredicted RBP5.99□□□□□ -1.45
CDC42EP3-204ENST00000457889 MAPKAPK5-AS1Q8N8E1 139 aa5.99□□□□□ -1.45
CDC42EP3-204ENST00000457889 COPS9Q8WXC6 57 aa5.99□□□□□ -1.45
CDC42EP3-204ENST00000457889 ZNF625Q96I27 306 aaPredicted RBP5.99□□□□□ -1.45
CDC42EP3-204ENST00000457889 TM2D2Q9BX73 214 aa5.99□□□□□ -1.45
CDC42EP3-204ENST00000457889 TTTY13Q9BZ97 58 aa5.99□□□□□ -1.45
CDC42EP3-204ENST00000457889 A0A0J9YXY3 114 aa5.98□□□□□ -1.45
CDC42EP3-204ENST00000457889 C3orf84H3BNL1 204 aa5.98□□□□□ -1.45
CDC42EP3-204ENST00000457889 CFAP161Q6P656 301 aa5.98□□□□□ -1.45
CDC42EP3-204ENST00000457889 KRTAP4-5Q9BYR2 181 aa5.98□□□□□ -1.45
CDC42EP3-204ENST00000457889 PPDPFQ9H3Y8 114 aa5.98□□□□□ -1.45
CDC42EP3-204ENST00000457889 TP73-AS1Q9UF72 201 aa5.98□□□□□ -1.45
CDC42EP3-204ENST00000457889 DNAH7Q8WXX0 4024 aa5.98□□□□□ -1.45
CDC42EP3-204ENST00000457889 DYNC2H1Q8NCM8 4307 aaKnown RBP5.98□□□□□ -1.45
CDC42EP3-204ENST00000457889 IGKV2D-24A0A075B6R9 120 aa5.97□□□□□ -1.45
CDC42EP3-204ENST00000457889 CKS1BP61024 79 aa5.97□□□□□ -1.45
CDC42EP3-204ENST00000457889 C6orf226Q5I0X4 101 aa5.97□□□□□ -1.45
CDC42EP3-204ENST00000457889 KRTAP26-1Q6PEX3 210 aa5.97□□□□□ -1.45
CDC42EP3-204ENST00000457889 ORAOV1Q8WV07 137 aa5.97□□□□□ -1.45
CDC42EP3-204ENST00000457889 IFITM1P13164 125 aa5.96□□□□□ -1.46
CDC42EP3-204ENST00000457889 SPAG11BQ08648 103 aa5.96□□□□□ -1.46
CDC42EP3-204ENST00000457889 SRSF9Q13242 221 aaKnown RBP eCLIP5.96□□□□□ -1.46
CDC42EP3-204ENST00000457889 SVIPQ8NHG7 77 aa5.96□□□□□ -1.46
CDC42EP3-204ENST00000457889 HIST1H4GQ99525 98 aa5.96□□□□□ -1.46
CDC42EP3-204ENST00000457889 SPANXDQ9BXN6 97 aa5.96□□□□□ -1.46
CDC42EP3-204ENST00000457889 SPANXCQ9NY87 97 aa5.96□□□□□ -1.46
CDC42EP3-204ENST00000457889 TOMM7Q9P0U1 55 aa5.96□□□□□ -1.46
CDC42EP3-204ENST00000457889 GVQW2A0A096LPI5 108 aaPredicted RBP5.95□□□□□ -1.46
CDC42EP3-204ENST00000457889 NBDYA0A0U1RRE5 68 aa5.95□□□□□ -1.46
CDC42EP3-204ENST00000457889 PTTG1IPP53801 180 aa5.95□□□□□ -1.46
CDC42EP3-204ENST00000457889 COX17Q14061 63 aa5.95□□□□□ -1.46
CDC42EP3-204ENST00000457889 KIAA0087Q14695 138 aa5.95□□□□□ -1.46
CDC42EP3-204ENST00000457889 BVES-AS1Q5T3Y7 98 aa5.95□□□□□ -1.46
CDC42EP3-204ENST00000457889 C2orf48Q96LS8 159 aa5.95□□□□□ -1.46
CDC42EP3-204ENST00000457889 Q9HAA7 133 aa5.95□□□□□ -1.46
CDC42EP3-204ENST00000457889 TGP01266 2768 aa5.95□□□□□ -1.46
CDC42EP3-204ENST00000457889 A6NDN8 102 aa5.94□□□□□ -1.46
CDC42EP3-204ENST00000457889 MEIG1Q5JSS6 88 aa5.94□□□□□ -1.46
CDC42EP3-204ENST00000457889 CEND1Q8N111 149 aa5.94□□□□□ -1.46
CDC42EP3-204ENST00000457889 LITAFQ99732 161 aa5.94□□□□□ -1.46
CDC42EP3-204ENST00000457889 TENM2Q9NT68 2774 aa5.93□□□□□ -1.46
CDC42EP3-204ENST00000457889 ZNF561-AS1K7EIQ3 104 aa5.93□□□□□ -1.46
CDC42EP3-204ENST00000457889 HINT1P49773 126 aaPredicted RBP5.93□□□□□ -1.46
CDC42EP3-204ENST00000457889 RPL24P83731 157 aaKnown RBP5.93□□□□□ -1.46
CDC42EP3-204ENST00000457889 COL5A1-AS1Q5SY13 56 aa5.93□□□□□ -1.46
CDC42EP3-204ENST00000457889 CASC10Q5T4H9 136 aa5.93□□□□□ -1.46
CDC42EP3-204ENST00000457889 SNHG12Q9BXW3 62 aa5.93□□□□□ -1.46
CDC42EP3-204ENST00000457889 TRBV30A0A0K0K1B3 111 aa5.92□□□□□ -1.46
CDC42EP3-204ENST00000457889 C14orf177Q52M58 125 aa5.92□□□□□ -1.46
CDC42EP3-204ENST00000457889 C15orf56Q8N910 161 aa5.92□□□□□ -1.46
CDC42EP3-204ENST00000457889 NTN5Q8WTR8 489 aaPredicted RBP5.92□□□□□ -1.46
CDC42EP3-204ENST00000457889 ERG28Q9UKR5 140 aa5.92□□□□□ -1.46
CDC42EP3-204ENST00000457889 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.91□□□□□ -1.46
CDC42EP3-204ENST00000457889 KRTAP1-5Q9BYS1 174 aa5.91□□□□□ -1.46
CDC42EP3-204ENST00000457889 CSMD3Q7Z407 3707 aa5.91□□□□□ -1.46
CDC42EP3-204ENST00000457889 PSCAO43653 123 aa5.9□□□□□ -1.46
CDC42EP3-204ENST00000457889 BATFQ16520 125 aa5.9□□□□□ -1.46
CDC42EP3-204ENST00000457889 RNF151Q2KHN1 245 aa5.9□□□□□ -1.46
CDC42EP3-204ENST00000457889 CAMK2N2Q96S95 79 aa5.9□□□□□ -1.46
CDC42EP3-204ENST00000457889 A0A1B0GWB2 263 aa5.89□□□□□ -1.47
CDC42EP3-204ENST00000457889 USP17L23D6RBM5 183 aa5.89□□□□□ -1.47
CDC42EP3-204ENST00000457889 SMIM13P0DJ93 91 aa5.89□□□□□ -1.47
CDC42EP3-204ENST00000457889 FXYD2P54710 66 aa5.89□□□□□ -1.47
CDC42EP3-204ENST00000457889 LINC00158P58513 81 aa5.89□□□□□ -1.47
CDC42EP3-204ENST00000457889 ADAMTSL4-AS1Q5T5F5 129 aa5.89□□□□□ -1.47
CDC42EP3-204ENST00000457889 LCE5AQ5TCM9 118 aa5.89□□□□□ -1.47
CDC42EP3-204ENST00000457889 C2orf82Q6UX34 121 aa5.89□□□□□ -1.47
CDC42EP3-204ENST00000457889 LINC00308Q8TCZ7 52 aa5.89□□□□□ -1.47
CDC42EP3-204ENST00000457889 LINC00476Q8WZB0 136 aa5.89□□□□□ -1.47
CDC42EP3-204ENST00000457889 PKIGQ9Y2B9 76 aa5.89□□□□□ -1.47
CDC42EP3-204ENST00000457889 A0A0B4J2C4 111 aa5.88□□□□□ -1.47
CDC42EP3-204ENST00000457889 LOC107984156A0A0G2JMH3 177 aa5.88□□□□□ -1.47
CDC42EP3-204ENST00000457889 SYCNQ0VAF6 134 aa5.88□□□□□ -1.47
CDC42EP3-204ENST00000457889 Q6ZR54 194 aa5.88□□□□□ -1.47
CDC42EP3-204ENST00000457889 ARL17AQ8IVW1 177 aa5.88□□□□□ -1.47
CDC42EP3-204ENST00000457889 MIR7-3HGQ8N6C7 128 aa5.88□□□□□ -1.47
CDC42EP3-204ENST00000457889 STARD9Q9P2P6 4700 aa5.87□□□□□ -1.47
CDC42EP3-204ENST00000457889 HIGD2BQ4VC39 106 aa5.87□□□□□ -1.47
CDC42EP3-204ENST00000457889 UNQ6190/PRO20217Q6UXQ8 127 aa5.87□□□□□ -1.47
CDC42EP3-204ENST00000457889 MUSTN1Q8IVN3 82 aa5.87□□□□□ -1.47
CDC42EP3-204ENST00000457889 CARD19Q96LW7 228 aa5.87□□□□□ -1.47
CDC42EP3-204ENST00000457889 A4D1N5 150 aa5.86□□□□□ -1.47
CDC42EP3-204ENST00000457889 PFN2P35080 140 aa5.86□□□□□ -1.47
CDC42EP3-204ENST00000457889 CNBPP62633 177 aaKnown RBP5.86□□□□□ -1.47
CDC42EP3-204ENST00000457889 Q6ZRN7 208 aaPredicted RBP5.86□□□□□ -1.47
CDC42EP3-204ENST00000457889 C6orf223Q8N319 242 aa5.86□□□□□ -1.47
CDC42EP3-204ENST00000457889 NHP2Q9NX24 153 aaKnown RBP5.86□□□□□ -1.47
CDC42EP3-204ENST00000457889 C6orf48Q9UBA6 75 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms