RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 IGHV4-28A0A0C4DH34 117 aa3.82□□□□□ -1.8
CSMD3-204ENST00000455883 SBSPONQ8IVN8 264 aa3.82□□□□□ -1.8
CSMD3-204ENST00000455883 IGLV5-39A0A0G2JS06 123 aa3.82□□□□□ -1.8
CSMD3-204ENST00000455883 RITA1Q96K30 269 aa3.82□□□□□ -1.8
CSMD3-204ENST00000455883 NBEAL2Q6ZNJ1 2754 aa3.82□□□□□ -1.8
CSMD3-204ENST00000455883 SERTAD4-AS1Q5TG53 156 aa3.81□□□□□ -1.8
CSMD3-204ENST00000455883 SMIM11BQ8TCY0 68 aa3.81□□□□□ -1.8
CSMD3-204ENST00000455883 Q9HAA7 133 aa3.81□□□□□ -1.8
CSMD3-204ENST00000455883 NUPR2A6NF83 97 aa3.81□□□□□ -1.8
CSMD3-204ENST00000455883 IGFL4Q6B9Z1 124 aa3.81□□□□□ -1.8
CSMD3-204ENST00000455883 ZNF295-AS1Q8N0V1 137 aa3.81□□□□□ -1.8
CSMD3-204ENST00000455883 ZNF581Q9P0T4 197 aa3.81□□□□□ -1.8
CSMD3-204ENST00000455883 TENM3Q9P273 2699 aa3.81□□□□□ -1.8
CSMD3-204ENST00000455883 LOC101927531A0A1B0GV80 90 aa3.81□□□□□ -1.8
CSMD3-204ENST00000455883 TRANK1O15050 2925 aa3.81□□□□□ -1.8
CSMD3-204ENST00000455883 IGLV1-40P01703 118 aa3.81□□□□□ -1.8
CSMD3-204ENST00000455883 PLA2G2EQ9NZK7 142 aa3.81□□□□□ -1.8
CSMD3-204ENST00000455883 SHISA2Q6UWI4 295 aa3.81□□□□□ -1.8
CSMD3-204ENST00000455883 DCANP1Q8TF63 244 aa3.81□□□□□ -1.8
CSMD3-204ENST00000455883 GDF5OSQ5U4N7 250 aa3.81□□□□□ -1.8
CSMD3-204ENST00000455883 Q6YL49 198 aa3.81□□□□□ -1.8
CSMD3-204ENST00000455883 Q6ZQT7 251 aa3.81□□□□□ -1.8
CSMD3-204ENST00000455883 ZNF702PQ9H963 129 aa3.81□□□□□ -1.8
CSMD3-204ENST00000455883 RNASE3P12724 160 aaKnown RBP3.81□□□□□ -1.8
CSMD3-204ENST00000455883 SPANXA2-OT1Q8N9U9 137 aa3.81□□□□□ -1.8
CSMD3-204ENST00000455883 EIF4EBP3O60516 100 aaPredicted RBP3.81□□□□□ -1.8
CSMD3-204ENST00000455883 RNASE13Q5GAN3 156 aaKnown RBP3.81□□□□□ -1.8
CSMD3-204ENST00000455883 RUSC1-AS1Q66K80 236 aa3.8□□□□□ -1.8
CSMD3-204ENST00000455883 SMIM1B2RUZ4 78 aa3.8□□□□□ -1.8
CSMD3-204ENST00000455883 LINC01547P58512 204 aaPredicted RBP3.8□□□□□ -1.8
CSMD3-204ENST00000455883 REG3GQ6UW15 175 aa3.8□□□□□ -1.8
CSMD3-204ENST00000455883 WFDC10BQ8IUB3 73 aa3.8□□□□□ -1.8
CSMD3-204ENST00000455883 C11orf72Q8NBR9 251 aa3.8□□□□□ -1.8
CSMD3-204ENST00000455883 IGLV10-54A0A075B6I4 117 aa3.8□□□□□ -1.8
CSMD3-204ENST00000455883 SELENOKQ9Y6D0 94 aa3.8□□□□□ -1.8
CSMD3-204ENST00000455883 WIPF1O43516 503 aa3.8□□□□□ -1.8
CSMD3-204ENST00000455883 F8W735 103 aaPredicted RBP3.8□□□□□ -1.8
CSMD3-204ENST00000455883 LYPD5Q6UWN5 251 aa3.8□□□□□ -1.8
CSMD3-204ENST00000455883 J3QKU1 62 aa3.79□□□□□ -1.8
CSMD3-204ENST00000455883 C11orf71Q6IPW1 123 aa3.79□□□□□ -1.8
CSMD3-204ENST00000455883 SPATA3Q8NHX4 192 aa3.79□□□□□ -1.8
CSMD3-204ENST00000455883 TRAV22A0A0B4J277 110 aa3.79□□□□□ -1.8
CSMD3-204ENST00000455883 SLURP1P55000 103 aa3.79□□□□□ -1.8
CSMD3-204ENST00000455883 LINC00242Q5T6M2 205 aa3.79□□□□□ -1.8
CSMD3-204ENST00000455883 KPRPQ5T749 579 aaPredicted RBP3.79□□□□□ -1.8
CSMD3-204ENST00000455883 ZNF503-AS2A6NEH8 195 aa3.79□□□□□ -1.8
CSMD3-204ENST00000455883 LINC00205P59089 165 aa3.79□□□□□ -1.8
CSMD3-204ENST00000455883 DNAH12Q6ZR08 3092 aa3.79□□□□□ -1.8
CSMD3-204ENST00000455883 CLPSL2Q6UWE3 100 aa3.79□□□□□ -1.8
CSMD3-204ENST00000455883 HIVEP1P15822 2718 aa3.79□□□□□ -1.8
CSMD3-204ENST00000455883 TRBV7-4A0A0J9YYF1 115 aa3.79□□□□□ -1.8
CSMD3-204ENST00000455883 SPAG11AQ6PDA7 123 aa3.79□□□□□ -1.8
CSMD3-204ENST00000455883 LINC00959A0A1B0GUT2 108 aa3.78□□□□□ -1.8
CSMD3-204ENST00000455883 PRR15Q8IV56 129 aa3.78□□□□□ -1.8
CSMD3-204ENST00000455883 Q8N7P7 452 aa3.78□□□□□ -1.8
CSMD3-204ENST00000455883 HRCT1Q6UXD1 115 aa3.78□□□□□ -1.8
CSMD3-204ENST00000455883 DEFB135Q30KP9 77 aa3.78□□□□□ -1.8
CSMD3-204ENST00000455883 SCXQ7RTU7 201 aa3.78□□□□□ -1.8
CSMD3-204ENST00000455883 H0Y9P7 68 aa3.78□□□□□ -1.8
CSMD3-204ENST00000455883 LINC00575Q6W349 94 aa3.78□□□□□ -1.8
CSMD3-204ENST00000455883 FAM19A1Q7Z5A9 133 aa3.78□□□□□ -1.8
CSMD3-204ENST00000455883 Q6ZVQ6 151 aa3.78□□□□□ -1.8
CSMD3-204ENST00000455883 Q6ZTC4 211 aa3.78□□□□□ -1.8
CSMD3-204ENST00000455883 C3orf84H3BNL1 204 aa3.78□□□□□ -1.81
CSMD3-204ENST00000455883 LMO4P61968 165 aa3.77□□□□□ -1.81
CSMD3-204ENST00000455883 GVQW2A0A096LPI5 108 aaPredicted RBP3.77□□□□□ -1.81
CSMD3-204ENST00000455883 UNQ9165/PRO28630Q6UXU0 137 aa3.77□□□□□ -1.81
CSMD3-204ENST00000455883 PRAC2D3DTV9 90 aa3.77□□□□□ -1.81
CSMD3-204ENST00000455883 CRIP1P50238 77 aa3.77□□□□□ -1.81
CSMD3-204ENST00000455883 FRYLO94915 3013 aa3.77□□□□□ -1.81
CSMD3-204ENST00000455883 LY6G6DO95868 133 aa3.77□□□□□ -1.81
CSMD3-204ENST00000455883 Q6ZSV7 163 aa3.77□□□□□ -1.81
CSMD3-204ENST00000455883 IGLV2-18A0A075B6J9 118 aa3.77□□□□□ -1.81
CSMD3-204ENST00000455883 FAM229AH3BQW9 127 aa3.77□□□□□ -1.81
CSMD3-204ENST00000455883 MDFIQ99750 246 aa3.77□□□□□ -1.81
CSMD3-204ENST00000455883 IGHV4-61A0A0C4DH41 118 aa3.77□□□□□ -1.81
CSMD3-204ENST00000455883 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.77□□□□□ -1.81
CSMD3-204ENST00000455883 CELSR2Q9HCU4 2923 aa3.76□□□□□ -1.81
CSMD3-204ENST00000455883 CHD7Q9P2D1 2997 aa3.76□□□□□ -1.81
CSMD3-204ENST00000455883 MAPKAPK5-AS1Q8N8E1 139 aa3.76□□□□□ -1.81
CSMD3-204ENST00000455883 Q6ZTI0 123 aa3.76□□□□□ -1.81
CSMD3-204ENST00000455883 CDIP1Q9H305 208 aa3.76□□□□□ -1.81
CSMD3-204ENST00000455883 DEFB131BA0A096LNP1 70 aa3.76□□□□□ -1.81
CSMD3-204ENST00000455883 A0A1B0GU69 56 aa3.76□□□□□ -1.81
CSMD3-204ENST00000455883 KLK9Q2XQG4 91 aa3.76□□□□□ -1.81
CSMD3-204ENST00000455883 SNURFQ9Y675 71 aa3.76□□□□□ -1.81
CSMD3-204ENST00000455883 TFF1P04155 84 aa3.76□□□□□ -1.81
CSMD3-204ENST00000455883 TENM1Q9UKZ4 2725 aa3.76□□□□□ -1.81
CSMD3-204ENST00000455883 UQCR11O14957 56 aa3.75□□□□□ -1.81
CSMD3-204ENST00000455883 Q8NBF4 154 aa3.75□□□□□ -1.81
CSMD3-204ENST00000455883 A8MZ25 164 aa3.75□□□□□ -1.81
CSMD3-204ENST00000455883 BRWD1-AS2P59051 145 aa3.75□□□□□ -1.81
CSMD3-204ENST00000455883 CYSRT1A8MQ03 144 aa3.75□□□□□ -1.81
CSMD3-204ENST00000455883 LINC01600Q96MT4 127 aa3.75□□□□□ -1.81
CSMD3-204ENST00000455883 ASB16-AS1Q495Z4 193 aa3.75□□□□□ -1.81
CSMD3-204ENST00000455883 KTN1-AS1Q86SY8 53 aa3.75□□□□□ -1.81
CSMD3-204ENST00000455883 C7orf65Q6ZTY9 151 aa3.74□□□□□ -1.81
CSMD3-204ENST00000455883 IGHV4-38-2P0DP08 117 aa3.74□□□□□ -1.81
CSMD3-204ENST00000455883 LINC00310P59036 64 aa3.74□□□□□ -1.81
CSMD3-204ENST00000455883 C1orf64Q8NEQ6 169 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms