RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 Q8IZM0 81 aa10.4□□□□□ -0.74
LDLR-202ENST00000455727 C6orf226Q5I0X4 101 aa10.39□□□□□ -0.75
LDLR-202ENST00000455727 SND1-IT1Q9HBX3 110 aa10.39□□□□□ -0.75
LDLR-202ENST00000455727 ATRQ13535 2644 aa10.39□□□□□ -0.75
LDLR-202ENST00000455727 IGHV4-30-4P0DP06 118 aa10.39□□□□□ -0.75
LDLR-202ENST00000455727 CELA1Q9UNI1 258 aa10.39□□□□□ -0.75
LDLR-202ENST00000455727 UBE2WQ96B02 151 aa10.38□□□□□ -0.75
LDLR-202ENST00000455727 RPL28P46779 137 aaKnown RBP10.38□□□□□ -0.75
LDLR-202ENST00000455727 TEX49A0A1B0GTD5 131 aa10.37□□□□□ -0.75
LDLR-202ENST00000455727 CRPP02741 224 aa10.37□□□□□ -0.75
LDLR-202ENST00000455727 CCL18P55774 89 aa10.37□□□□□ -0.75
LDLR-202ENST00000455727 MRPL23Q16540 153 aaKnown RBP10.37□□□□□ -0.75
LDLR-202ENST00000455727 CD164L2Q6UWJ8 174 aa10.37□□□□□ -0.75
LDLR-202ENST00000455727 IGKV2-28A0A075B6P5 120 aa10.36□□□□□ -0.75
LDLR-202ENST00000455727 IGKV2D-28P01615 120 aa10.36□□□□□ -0.75
LDLR-202ENST00000455727 LINC00269Q8N2A0 174 aa10.36□□□□□ -0.75
LDLR-202ENST00000455727 TRACP01848 142 aa10.36□□□□□ -0.75
LDLR-202ENST00000455727 LINC00337Q8N6G1 96 aa10.35□□□□□ -0.75
LDLR-202ENST00000455727 DEFB121Q5J5C9 76 aa10.35□□□□□ -0.75
LDLR-202ENST00000455727 CLPSL2Q6UWE3 100 aa10.35□□□□□ -0.75
LDLR-202ENST00000455727 PFN2P35080 140 aa10.34□□□□□ -0.75
LDLR-202ENST00000455727 ANGP03950 147 aaKnown RBP10.34□□□□□ -0.75
LDLR-202ENST00000455727 REG3AQ06141 175 aa10.34□□□□□ -0.75
LDLR-202ENST00000455727 LELP1Q5T871 98 aa10.34□□□□□ -0.75
LDLR-202ENST00000455727 CHCHD10Q8WYQ3 142 aaPredicted RBP10.33□□□□□ -0.76
LDLR-202ENST00000455727 CXCL5P42830 114 aa10.33□□□□□ -0.76
LDLR-202ENST00000455727 KIAA0087Q14695 138 aa10.32□□□□□ -0.76
LDLR-202ENST00000455727 TRRAPQ9Y4A5 3859 aa10.32□□□□□ -0.76
LDLR-202ENST00000455727 COX17Q14061 63 aa10.31□□□□□ -0.76
LDLR-202ENST00000455727 TRAV8-4A0A0B4J246 113 aa10.3□□□□□ -0.76
LDLR-202ENST00000455727 C11orf68Q9H3H3 251 aaKnown RBP10.3□□□□□ -0.76
LDLR-202ENST00000455727 HTN3P15516 51 aa10.29□□□□□ -0.76
LDLR-202ENST00000455727 Q8N3U1 123 aa10.29□□□□□ -0.76
LDLR-202ENST00000455727 SMIM11BQ8TCY0 68 aa10.29□□□□□ -0.76
LDLR-202ENST00000455727 FAM218AQ96MZ4 157 aa10.29□□□□□ -0.76
LDLR-202ENST00000455727 H0YGX0 51 aa10.29□□□□□ -0.76
LDLR-202ENST00000455727 CFAP161Q6P656 301 aa10.29□□□□□ -0.76
LDLR-202ENST00000455727 FAM240AA0A1B0GVK7 77 aa10.28□□□□□ -0.76
LDLR-202ENST00000455727 MALP21145 153 aa10.28□□□□□ -0.76
LDLR-202ENST00000455727 PRR34Q9NV39 138 aa10.28□□□□□ -0.76
LDLR-202ENST00000455727 IGLV10-54A0A075B6I4 117 aa10.27□□□□□ -0.77
LDLR-202ENST00000455727 KLK5Q9Y337 293 aaPredicted RBP10.27□□□□□ -0.77
LDLR-202ENST00000455727 H3BNG1 76 aa10.27□□□□□ -0.77
LDLR-202ENST00000455727 BAALC-AS2P0C853 105 aa10.27□□□□□ -0.77
LDLR-202ENST00000455727 SNCGO76070 127 aa10.26□□□□□ -0.77
LDLR-202ENST00000455727 OXLD1Q5BKU9 147 aa10.26□□□□□ -0.77
LDLR-202ENST00000455727 NDUFC2O95298 119 aa10.25□□□□□ -0.77
LDLR-202ENST00000455727 KRTAP10-11P60412 298 aa10.25□□□□□ -0.77
LDLR-202ENST00000455727 EGFEM1PQ0D2K5 195 aa10.25□□□□□ -0.77
LDLR-202ENST00000455727 LYPD5Q6UWN5 251 aa10.25□□□□□ -0.77
LDLR-202ENST00000455727 GAGE2BQ13066 116 aa10.24□□□□□ -0.77
LDLR-202ENST00000455727 GAGE2EQ4V326 116 aa10.24□□□□□ -0.77
LDLR-202ENST00000455727 MUC7Q8TAX7 377 aa10.24□□□□□ -0.77
LDLR-202ENST00000455727 GAGE2DQ9UEU5 116 aa10.24□□□□□ -0.77
LDLR-202ENST00000455727 OR13C6PQ8NH95 151 aa10.23□□□□□ -0.77
LDLR-202ENST00000455727 ANAPC13Q9BS18 74 aa10.23□□□□□ -0.77
LDLR-202ENST00000455727 C22orf24Q9Y442 160 aa10.23□□□□□ -0.77
LDLR-202ENST00000455727 F8P00451 2351 aa10.22□□□□□ -0.77
LDLR-202ENST00000455727 KLK12Q9UKR0 248 aa10.22□□□□□ -0.77
LDLR-202ENST00000455727 ACYP1P07311 99 aa10.22□□□□□ -0.77
LDLR-202ENST00000455727 KRTAP24-1Q3LI83 254 aa10.22□□□□□ -0.77
LDLR-202ENST00000455727 ENHOQ6UWT2 76 aa10.22□□□□□ -0.77
LDLR-202ENST00000455727 DNAL4O96015 105 aa10.21□□□□□ -0.77
LDLR-202ENST00000455727 C15orf53Q8NAA6 179 aa10.21□□□□□ -0.77
LDLR-202ENST00000455727 A0A087WYN8 130 aa10.21□□□□□ -0.78
LDLR-202ENST00000455727 Q6Q795 121 aa10.21□□□□□ -0.78
LDLR-202ENST00000455727 Q9HAA7 133 aa10.21□□□□□ -0.78
LDLR-202ENST00000455727 A0A0J9YWU9 116 aa10.2□□□□□ -0.78
LDLR-202ENST00000455727 SPAG11BQ08648 103 aa10.2□□□□□ -0.78
LDLR-202ENST00000455727 KPRPQ5T749 579 aaPredicted RBP10.19□□□□□ -0.78
LDLR-202ENST00000455727 TMEM126AQ9H061 195 aa10.19□□□□□ -0.78
LDLR-202ENST00000455727 RETNQ9HD89 108 aa10.19□□□□□ -0.78
LDLR-202ENST00000455727 INAFM2P0DMQ5 153 aa10.18□□□□□ -0.78
LDLR-202ENST00000455727 C9orf116Q5BN46 136 aaPredicted RBP10.18□□□□□ -0.78
LDLR-202ENST00000455727 C3orf56Q8N813 242 aa10.18□□□□□ -0.78
LDLR-202ENST00000455727 NANOS2P60321 138 aaKnown RBP10.18□□□□□ -0.78
LDLR-202ENST00000455727 GVQW2A0A096LPI5 108 aaPredicted RBP10.17□□□□□ -0.78
LDLR-202ENST00000455727 A0A1B0GX51 115 aa10.17□□□□□ -0.78
LDLR-202ENST00000455727 NHLRC4P0CG21 123 aaPredicted RBP10.17□□□□□ -0.78
LDLR-202ENST00000455727 NDUFV3P56181 108 aaKnown RBP10.17□□□□□ -0.78
LDLR-202ENST00000455727 UNQ6190/PRO20217Q6UXQ8 127 aa10.17□□□□□ -0.78
LDLR-202ENST00000455727 CYSRT1A8MQ03 144 aa10.16□□□□□ -0.78
LDLR-202ENST00000455727 TTC32Q5I0X7 151 aa10.16□□□□□ -0.78
LDLR-202ENST00000455727 C10orf25Q5T742 122 aa10.16□□□□□ -0.78
LDLR-202ENST00000455727 C6orf223Q8N319 242 aa10.16□□□□□ -0.78
LDLR-202ENST00000455727 LECT2O14960 151 aa10.16□□□□□ -0.78
LDLR-202ENST00000455727 PRR3P79522 188 aaKnown RBP10.16□□□□□ -0.78
LDLR-202ENST00000455727 Q6ZTC4 211 aa10.16□□□□□ -0.78
LDLR-202ENST00000455727 CMYA5Q8N3K9 4069 aa10.14□□□□□ -0.79
LDLR-202ENST00000455727 WFDC10BQ8IUB3 73 aa10.14□□□□□ -0.79
LDLR-202ENST00000455727 OBSCN-AS1Q96MR7 158 aa10.14□□□□□ -0.79
LDLR-202ENST00000455727 LINC00167Q96N53 147 aa10.13□□□□□ -0.79
LDLR-202ENST00000455727 SDIM1Q6ZPB5 146 aa10.12□□□□□ -0.79
LDLR-202ENST00000455727 Q8NDZ9 215 aa10.12□□□□□ -0.79
LDLR-202ENST00000455727 KRTAP26-1Q6PEX3 210 aa10.11□□□□□ -0.79
LDLR-202ENST00000455727 ORMDL1Q9P0S3 153 aa10.11□□□□□ -0.79
LDLR-202ENST00000455727 LINC00526Q96FQ7 95 aa10.11□□□□□ -0.79
LDLR-202ENST00000455727 ESRGQ1W209 222 aa10.1□□□□□ -0.79
LDLR-202ENST00000455727 Q8N814 137 aa10.1□□□□□ -0.79
LDLR-202ENST00000455727 TRBV7-7A0A0K0K1E9 115 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms