RNA–Protein interactions for RNA: ENST00000455629.5

CCDC144B-204, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best)

Gene CCDC144B, Length 946 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-204ENST00000455629 C5orf38Q86SI9 138 aa11.08□□□□□ -0.64
CCDC144B-204ENST00000455629 HIST3H2BBQ8N257 126 aa11.08□□□□□ -0.64
CCDC144B-204ENST00000455629 IGLV4-69A0A075B6H9 119 aa11.07□□□□□ -0.64
CCDC144B-204ENST00000455629 GVQW2A0A096LPI5 108 aaPredicted RBP11.07□□□□□ -0.64
CCDC144B-204ENST00000455629 IGLC3P0DOY3 106 aa11.07□□□□□ -0.64
CCDC144B-204ENST00000455629 HERVK_113P63121 156 aa11.07□□□□□ -0.64
CCDC144B-204ENST00000455629 HIGD2BQ4VC39 106 aa11.07□□□□□ -0.64
CCDC144B-204ENST00000455629 GEMIN7Q9H840 131 aaKnown RBP11.07□□□□□ -0.64
CCDC144B-204ENST00000455629 CHTOPQ9Y3Y2 248 aaKnown RBP11.07□□□□□ -0.64
CCDC144B-204ENST00000455629 IGKV2-24A0A0C4DH68 120 aa11.06□□□□□ -0.64
CCDC144B-204ENST00000455629 H0Y8G0 127 aa11.06□□□□□ -0.64
CCDC144B-204ENST00000455629 SNRPEP62304 92 aaKnown RBP11.06□□□□□ -0.64
CCDC144B-204ENST00000455629 PRR3P79522 188 aaKnown RBP11.06□□□□□ -0.64
CCDC144B-204ENST00000455629 LINC01600Q96MT4 127 aa11.06□□□□□ -0.64
CCDC144B-204ENST00000455629 MAP1LC3CQ9BXW4 147 aa11.06□□□□□ -0.64
CCDC144B-204ENST00000455629 A0A087WZ39 114 aa11.05□□□□□ -0.64
CCDC144B-204ENST00000455629 C5orf52A6NGY3 159 aa11.05□□□□□ -0.64
CCDC144B-204ENST00000455629 MALP21145 153 aa11.05□□□□□ -0.64
CCDC144B-204ENST00000455629 STPG4Q8N801 248 aa11.05□□□□□ -0.64
CCDC144B-204ENST00000455629 CDKN2A-AS1Q9UH64 79 aa11.05□□□□□ -0.64
CCDC144B-204ENST00000455629 PKIGQ9Y2B9 76 aa11.05□□□□□ -0.64
CCDC144B-204ENST00000455629 IGLV5-45A0A087WSX0 123 aa11.04□□□□□ -0.64
CCDC144B-204ENST00000455629 IGHV1-58A0A0C4DH39 117 aa11.04□□□□□ -0.64
CCDC144B-204ENST00000455629 S100A2P29034 98 aa11.04□□□□□ -0.64
CCDC144B-204ENST00000455629 ODF1Q14990 250 aa11.04□□□□□ -0.64
CCDC144B-204ENST00000455629 MRPL35Q9NZE8 188 aaKnown RBP11.04□□□□□ -0.64
CCDC144B-204ENST00000455629 LINC00474Q9P2X8 69 aa11.04□□□□□ -0.64
CCDC144B-204ENST00000455629 TNXBP22105 4242 aa11.03□□□□□ -0.64
CCDC144B-204ENST00000455629 F8VRH5 84 aa11.03□□□□□ -0.64
CCDC144B-204ENST00000455629 SYS1-DBNDD2H3BUS1 97 aa11.03□□□□□ -0.64
CCDC144B-204ENST00000455629 LINC00469Q8N7U9 141 aa11.03□□□□□ -0.64
CCDC144B-204ENST00000455629 HIST1H2BLQ99880 126 aa11.03□□□□□ -0.64
CCDC144B-204ENST00000455629 C11orf86A6NJI1 115 aa11.02□□□□□ -0.65
CCDC144B-204ENST00000455629 C3orf79P0CE67 100 aa11.02□□□□□ -0.65
CCDC144B-204ENST00000455629 LINC01561Q8N1V8 128 aa11.02□□□□□ -0.65
CCDC144B-204ENST00000455629 TMA7Q9Y2S6 64 aaKnown RBP11.02□□□□□ -0.65
CCDC144B-204ENST00000455629 A0A096LNI7 61 aa11.01□□□□□ -0.65
CCDC144B-204ENST00000455629 APOMO95445 188 aa11.01□□□□□ -0.65
CCDC144B-204ENST00000455629 ZNF22P17026 224 aaPredicted RBP11.01□□□□□ -0.65
CCDC144B-204ENST00000455629 LRP2P98164 4655 aa11□□□□□ -0.65
CCDC144B-204ENST00000455629 KRTDAPP60985 99 aa11□□□□□ -0.65
CCDC144B-204ENST00000455629 SPINK6Q6UWN8 80 aa10.99□□□□□ -0.65
CCDC144B-204ENST00000455629 PET117Q6UWS5 81 aa10.99□□□□□ -0.65
CCDC144B-204ENST00000455629 OR10D4PQ8NGN7 298 aa10.99□□□□□ -0.65
CCDC144B-204ENST00000455629 ORAOV1Q8WV07 137 aa10.99□□□□□ -0.65
CCDC144B-204ENST00000455629 PMCHL2Q9BQD1 86 aa10.99□□□□□ -0.65
CCDC144B-204ENST00000455629 SMIM1B2RUZ4 78 aa10.98□□□□□ -0.65
CCDC144B-204ENST00000455629 H3BRM9 83 aa10.98□□□□□ -0.65
CCDC144B-204ENST00000455629 TMEM170BQ5T4T1 132 aa10.98□□□□□ -0.65
CCDC144B-204ENST00000455629 REG3GQ6UW15 175 aa10.98□□□□□ -0.65
CCDC144B-204ENST00000455629 SPINK8P0C7L1 97 aa10.97□□□□□ -0.65
CCDC144B-204ENST00000455629 PLNP26678 52 aa10.97□□□□□ -0.65
CCDC144B-204ENST00000455629 SPAG11BQ08648 103 aa10.97□□□□□ -0.65
CCDC144B-204ENST00000455629 LINC01545Q5VT33 79 aa10.97□□□□□ -0.65
CCDC144B-204ENST00000455629 LINC00526Q96FQ7 95 aa10.97□□□□□ -0.65
CCDC144B-204ENST00000455629 CARD19Q96LW7 228 aa10.97□□□□□ -0.65
CCDC144B-204ENST00000455629 ZNF561-AS1K7EIQ3 104 aa10.96□□□□□ -0.65
CCDC144B-204ENST00000455629 DPM2O94777 84 aa10.96□□□□□ -0.65
CCDC144B-204ENST00000455629 IGKCP01834 107 aa10.95□□□□□ -0.66
CCDC144B-204ENST00000455629 KIAA0087Q14695 138 aa10.95□□□□□ -0.66
CCDC144B-204ENST00000455629 Q6ZRP5 223 aa10.95□□□□□ -0.66
CCDC144B-204ENST00000455629 KRTAP10-8P60410 259 aa10.94□□□□□ -0.66
CCDC144B-204ENST00000455629 IGLV5-39A0A0G2JS06 123 aa10.93□□□□□ -0.66
CCDC144B-204ENST00000455629 TMEM223A0PJW6 202 aa10.93□□□□□ -0.66
CCDC144B-204ENST00000455629 SYCNQ0VAF6 134 aa10.93□□□□□ -0.66
CCDC144B-204ENST00000455629 SRSF9Q13242 221 aaKnown RBP eCLIP10.93□□□□□ -0.66
CCDC144B-204ENST00000455629 Q8IZM0 81 aa10.93□□□□□ -0.66
CCDC144B-204ENST00000455629 C2orf48Q96LS8 159 aa10.93□□□□□ -0.66
CCDC144B-204ENST00000455629 TOMM7Q9P0U1 55 aa10.93□□□□□ -0.66
CCDC144B-204ENST00000455629 RNF213Q63HN8 5207 aa10.92□□□□□ -0.66
CCDC144B-204ENST00000455629 C20orf202A1L168 122 aa10.92□□□□□ -0.66
CCDC144B-204ENST00000455629 F8WDY8 70 aa10.91□□□□□ -0.66
CCDC144B-204ENST00000455629 PRSS2P07478 247 aa10.91□□□□□ -0.66
CCDC144B-204ENST00000455629 PTTG1IPP53801 180 aa10.91□□□□□ -0.66
CCDC144B-204ENST00000455629 COX7B2Q8TF08 81 aa10.91□□□□□ -0.66
CCDC144B-204ENST00000455629 CAMK2N2Q96S95 79 aa10.91□□□□□ -0.66
CCDC144B-204ENST00000455629 C6orf226Q5I0X4 101 aa10.9□□□□□ -0.66
CCDC144B-204ENST00000455629 LOC107984640A0A0U1RRK4 108 aa10.89□□□□□ -0.67
CCDC144B-204ENST00000455629 C2orf82Q6UX34 121 aa10.89□□□□□ -0.67
CCDC144B-204ENST00000455629 NDUFA1O15239 70 aa10.88□□□□□ -0.67
CCDC144B-204ENST00000455629 C10orf25Q5T742 122 aa10.88□□□□□ -0.67
CCDC144B-204ENST00000455629 CKS1BP61024 79 aa10.87□□□□□ -0.67
CCDC144B-204ENST00000455629 GAGE2BQ13066 116 aa10.87□□□□□ -0.67
CCDC144B-204ENST00000455629 UNQ6190/PRO20217Q6UXQ8 127 aa10.87□□□□□ -0.67
CCDC144B-204ENST00000455629 CXCL5P42830 114 aa10.86□□□□□ -0.67
CCDC144B-204ENST00000455629 AKR1D1P51857 326 aa10.86□□□□□ -0.67
CCDC144B-204ENST00000455629 HERVK_113P61574 105 aa10.86□□□□□ -0.67
CCDC144B-204ENST00000455629 RNF151Q2KHN1 245 aa10.85□□□□□ -0.67
CCDC144B-204ENST00000455629 ATOH7Q8N100 152 aa10.85□□□□□ -0.67
CCDC144B-204ENST00000455629 C6orf48Q9UBA6 75 aa10.85□□□□□ -0.67
CCDC144B-204ENST00000455629 LEPROTO15243 131 aa10.84□□□□□ -0.67
CCDC144B-204ENST00000455629 TRBV30A0A0K0K1B3 111 aa10.83□□□□□ -0.68
CCDC144B-204ENST00000455629 PLEKHB2Q96CS7 222 aa10.83□□□□□ -0.68
CCDC144B-204ENST00000455629 A0A1W2PNN7 141 aa10.82□□□□□ -0.68
CCDC144B-204ENST00000455629 E9PLD3 99 aa10.82□□□□□ -0.68
CCDC144B-204ENST00000455629 SCGB1D1O95968 90 aa10.82□□□□□ -0.68
CCDC144B-204ENST00000455629 TSPEAR-AS2P59090 65 aa10.82□□□□□ -0.68
CCDC144B-204ENST00000455629 ZNF625Q96I27 306 aaPredicted RBP10.81□□□□□ -0.68
CCDC144B-204ENST00000455629 PSORS1C2Q9UIG4 136 aa10.81□□□□□ -0.68
CCDC144B-204ENST00000455629 J3QQQ9 107 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms