RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 SEC11AP67812 179 aa15.5■□□□□ 0.07
MSH2-203ENST00000454849 PRR3P79522 188 aaKnown RBP15.5■□□□□ 0.07
MSH2-203ENST00000454849 C6orf226Q5I0X4 101 aa15.5■□□□□ 0.07
MSH2-203ENST00000454849 PACRGQ96M98 296 aaPredicted RBP15.5■□□□□ 0.07
MSH2-203ENST00000454849 PKHD1L1Q86WI1 4243 aa15.5■□□□□ 0.07
MSH2-203ENST00000454849 NDUFA6P56556 154 aa15.49■□□□□ 0.07
MSH2-203ENST00000454849 CKS1BP61024 79 aa15.48■□□□□ 0.07
MSH2-203ENST00000454849 PMVKQ15126 192 aa15.47■□□□□ 0.07
MSH2-203ENST00000454849 PHF5AQ7RTV0 110 aaKnown RBP15.47■□□□□ 0.07
MSH2-203ENST00000454849 TINCRA0A1B0GVN0 87 aa15.46■□□□□ 0.07
MSH2-203ENST00000454849 LINC01549A6NIU2 74 aa15.46■□□□□ 0.07
MSH2-203ENST00000454849 TRBV30A0A0K0K1B3 111 aa15.45■□□□□ 0.06
MSH2-203ENST00000454849 TLX1NBP0CAT3 122 aa15.45■□□□□ 0.06
MSH2-203ENST00000454849 OXTP01178 125 aa15.44■□□□□ 0.06
MSH2-203ENST00000454849 SPINK8P0C7L1 97 aa15.44■□□□□ 0.06
MSH2-203ENST00000454849 FAM19A5Q7Z5A7 132 aaPredicted RBP15.44■□□□□ 0.06
MSH2-203ENST00000454849 Q8IZM0 81 aa15.44■□□□□ 0.06
MSH2-203ENST00000454849 SMIM1B2RUZ4 78 aa15.43■□□□□ 0.06
MSH2-203ENST00000454849 HBDP02042 147 aa15.43■□□□□ 0.06
MSH2-203ENST00000454849 FAT3Q8TDW7 4589 aa15.42■□□□□ 0.06
MSH2-203ENST00000454849 NDUFC2-KCTD14E9PQ53 114 aa15.41■□□□□ 0.06
MSH2-203ENST00000454849 RAB5BP61020 215 aa15.41■□□□□ 0.06
MSH2-203ENST00000454849 IGLV5-45A0A087WSX0 123 aa15.4■□□□□ 0.06
MSH2-203ENST00000454849 PDZD11Q5EBL8 140 aa15.4■□□□□ 0.06
MSH2-203ENST00000454849 C9orf129Q5T035 196 aaKnown RBP15.39■□□□□ 0.05
MSH2-203ENST00000454849 KRTAP7-1Q8IUC3 87 aa15.39■□□□□ 0.05
MSH2-203ENST00000454849 COX7B2Q8TF08 81 aa15.39■□□□□ 0.05
MSH2-203ENST00000454849 KRTAP11-1Q8IUC1 163 aa15.37■□□□□ 0.05
MSH2-203ENST00000454849 PSORS1C2Q9UIG4 136 aa15.37■□□□□ 0.05
MSH2-203ENST00000454849 F8VRH5 84 aa15.36■□□□□ 0.05
MSH2-203ENST00000454849 TRGC2P03986 189 aa15.35■□□□□ 0.05
MSH2-203ENST00000454849 IGLC3P0DOY3 106 aa15.35■□□□□ 0.05
MSH2-203ENST00000454849 BAGE3Q86Y29 109 aa15.35■□□□□ 0.05
MSH2-203ENST00000454849 XAGE1AQ9HD64 81 aa15.35■□□□□ 0.05
MSH2-203ENST00000454849 ATP5LO75964 103 aa15.33■□□□□ 0.04
MSH2-203ENST00000454849 H3BRM9 83 aa15.32■□□□□ 0.04
MSH2-203ENST00000454849 ZNF22P17026 224 aaPredicted RBP15.32■□□□□ 0.04
MSH2-203ENST00000454849 C1orf137Q5JT78 98 aa15.32■□□□□ 0.04
MSH2-203ENST00000454849 M0QXV9 152 aa15.31■□□□□ 0.04
MSH2-203ENST00000454849 MT1HL1P0DM35 61 aa15.31■□□□□ 0.04
MSH2-203ENST00000454849 FAM19A2Q8N3H0 131 aa15.31■□□□□ 0.04
MSH2-203ENST00000454849 CHCHD1Q96BP2 118 aaKnown RBP15.31■□□□□ 0.04
MSH2-203ENST00000454849 C11orf86A6NJI1 115 aa15.3■□□□□ 0.04
MSH2-203ENST00000454849 CXCL5P42830 114 aa15.3■□□□□ 0.04
MSH2-203ENST00000454849 SRSF9Q13242 221 aaKnown RBP eCLIP15.3■□□□□ 0.04
MSH2-203ENST00000454849 SERTAD4-AS1Q5TG53 156 aa15.3■□□□□ 0.04
MSH2-203ENST00000454849 SPINK6Q6UWN8 80 aa15.28■□□□□ 0.04
MSH2-203ENST00000454849 UBE2BP63146 152 aa15.27■□□□□ 0.04
MSH2-203ENST00000454849 TMEM170BQ5T4T1 132 aa15.27■□□□□ 0.04
MSH2-203ENST00000454849 CHTOPQ9Y3Y2 248 aaKnown RBP15.27■□□□□ 0.04
MSH2-203ENST00000454849 IFI27L1Q96BM0 104 aa15.26■□□□□ 0.03
MSH2-203ENST00000454849 IGLV5-39A0A0G2JS06 123 aa15.25■□□□□ 0.03
MSH2-203ENST00000454849 COLCA2A8K830 154 aa15.25■□□□□ 0.03
MSH2-203ENST00000454849 HSBP1O75506 76 aa15.25■□□□□ 0.03
MSH2-203ENST00000454849 SCO1O75880 301 aa15.24■□□□□ 0.03
MSH2-203ENST00000454849 C22orf24Q9Y442 160 aa15.23■□□□□ 0.03
MSH2-203ENST00000454849 SERF1AO75920 110 aa15.22■□□□□ 0.03
MSH2-203ENST00000454849 LINC00310P59036 64 aa15.22■□□□□ 0.03
MSH2-203ENST00000454849 H0Y8G0 127 aa15.21■□□□□ 0.03
MSH2-203ENST00000454849 PFN2P35080 140 aa15.21■□□□□ 0.03
MSH2-203ENST00000454849 ZNF625Q96I27 306 aaPredicted RBP15.21■□□□□ 0.03
MSH2-203ENST00000454849 NUPR1O60356 82 aa15.2■□□□□ 0.02
MSH2-203ENST00000454849 IGLV7-43P04211 117 aa15.2■□□□□ 0.02
MSH2-203ENST00000454849 ODF1Q14990 250 aa15.2■□□□□ 0.02
MSH2-203ENST00000454849 LINC01600Q96MT4 127 aa15.2■□□□□ 0.02
MSH2-203ENST00000454849 REG3GQ6UW15 175 aa15.19■□□□□ 0.02
MSH2-203ENST00000454849 TRAV12-1A0A0B4J245 112 aa15.17■□□□□ 0.02
MSH2-203ENST00000454849 GAGE10A6NGK3 116 aa15.14■□□□□ 0.01
MSH2-203ENST00000454849 FABP4P15090 132 aa15.14■□□□□ 0.01
MSH2-203ENST00000454849 TMEM223A0PJW6 202 aa15.13■□□□□ 0.01
MSH2-203ENST00000454849 LBHQ53QV2 105 aaPredicted RBP15.13■□□□□ 0.01
MSH2-203ENST00000454849 ERG28Q9UKR5 140 aa15.13■□□□□ 0.01
MSH2-203ENST00000454849 RPL37AP8A6NKH3 93 aa15.12■□□□□ 0.01
MSH2-203ENST00000454849 LEPROTL1O95214 131 aa15.12■□□□□ 0.01
MSH2-203ENST00000454849 MRPL55Q7Z7F7 128 aaKnown RBP15.12■□□□□ 0.01
MSH2-203ENST00000454849 LINC00167Q96N53 147 aa15.1■□□□□ 0.01
MSH2-203ENST00000454849 DIRC1Q969H9 104 aa15.09■□□□□ 0.01
MSH2-203ENST00000454849 SND1-IT1Q9HBX3 110 aa15.09■□□□□ 0.01
MSH2-203ENST00000454849 A0A0U1RRA0 63 aa15.08■□□□□ 0
MSH2-203ENST00000454849 KRTAP10-8P60410 259 aa15.08■□□□□ 0
MSH2-203ENST00000454849 TP73-AS1Q9UF72 201 aa15.08■□□□□ 0
MSH2-203ENST00000454849 PMCHL2Q9BQD1 86 aa15.07■□□□□ 0
MSH2-203ENST00000454849 PLA2G2DQ9UNK4 145 aa15.07■□□□□ 0
MSH2-203ENST00000454849 TNXBP22105 4242 aa15.06■□□□□ 0
MSH2-203ENST00000454849 NKAPP1Q8N9T2 125 aa15.06■□□□□ 0
MSH2-203ENST00000454849 H0Y9J4 135 aa15.05■□□□□ -0
MSH2-203ENST00000454849 LINC00158P58513 81 aa15.05■□□□□ -0
MSH2-203ENST00000454849 HSPB8Q9UJY1 196 aa15.05■□□□□ -0
MSH2-203ENST00000454849 Q8NDZ9 215 aa15.03■□□□□ -0
MSH2-203ENST00000454849 IGLV5-37A0A075B6J1 123 aa15.02■□□□□ -0
MSH2-203ENST00000454849 COX17Q14061 63 aa15.02■□□□□ -0
MSH2-203ENST00000454849 HIST1H2BKO60814 126 aa15.01□□□□□ -0.01
MSH2-203ENST00000454849 HIST1H2BJP06899 126 aa15.01□□□□□ -0.01
MSH2-203ENST00000454849 HIST1H2BOP23527 126 aa15.01□□□□□ -0.01
MSH2-203ENST00000454849 HIST1H2BBP33778 126 aa15.01□□□□□ -0.01
MSH2-203ENST00000454849 HIST1H2BDP58876 126 aa15.01□□□□□ -0.01
MSH2-203ENST00000454849 HIST1H2BCP62807 126 aa15.01□□□□□ -0.01
MSH2-203ENST00000454849 HIST2H2BEQ16778 126 aa15.01□□□□□ -0.01
MSH2-203ENST00000454849 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.01□□□□□ -0.01
MSH2-203ENST00000454849 PRR26Q8N8Z3 221 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms