RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 C5P01031 1676 aa0.45□□□□□ -2.34
HMGN3P1-201ENST00000453847 PPRC1Q5VV67 1664 aaKnown RBP0.45□□□□□ -2.34
HMGN3P1-201ENST00000453847 CSMD3Q7Z407 3707 aa0.45□□□□□ -2.34
HMGN3P1-201ENST00000453847 RGPD3A6NKT7 1758 aaPredicted RBP0.45□□□□□ -2.34
HMGN3P1-201ENST00000453847 SLIT1O75093 1534 aa0.44□□□□□ -2.34
HMGN3P1-201ENST00000453847 ABCC2Q92887 1545 aa0.44□□□□□ -2.34
HMGN3P1-201ENST00000453847 USP24Q9UPU5 2620 aa0.44□□□□□ -2.34
HMGN3P1-201ENST00000453847 USF3Q68DE3 2245 aa0.44□□□□□ -2.34
HMGN3P1-201ENST00000453847 ATP10BO94823 1461 aa0.44□□□□□ -2.34
HMGN3P1-201ENST00000453847 ARMS2P0C7Q2 107 aa0.44□□□□□ -2.34
HMGN3P1-201ENST00000453847 KIAA0556O60303 1618 aa0.44□□□□□ -2.34
HMGN3P1-201ENST00000453847 ANKRD17O75179 2603 aaKnown RBP0.44□□□□□ -2.34
HMGN3P1-201ENST00000453847 MYH4Q9Y623 1939 aa0.44□□□□□ -2.34
HMGN3P1-201ENST00000453847 ZNF292O60281 2723 aa0.44□□□□□ -2.34
HMGN3P1-201ENST00000453847 TRBV7-4A0A0J9YYF1 115 aa0.43□□□□□ -2.34
HMGN3P1-201ENST00000453847 F8WEM9 126 aa0.43□□□□□ -2.34
HMGN3P1-201ENST00000453847 ANKRD36A6QL64 1941 aa0.42□□□□□ -2.34
HMGN3P1-201ENST00000453847 CRYBG1Q9Y4K1 1723 aa0.42□□□□□ -2.34
HMGN3P1-201ENST00000453847 FAT4Q6V0I7 4981 aa0.42□□□□□ -2.34
HMGN3P1-201ENST00000453847 H0Y9P7 68 aa0.42□□□□□ -2.34
HMGN3P1-201ENST00000453847 GYPAP02724 150 aa0.42□□□□□ -2.34
HMGN3P1-201ENST00000453847 V9GYS6 101 aa0.42□□□□□ -2.34
HMGN3P1-201ENST00000453847 ABCC3O15438 1527 aa0.42□□□□□ -2.34
HMGN3P1-201ENST00000453847 EDC4Q6P2E9 1401 aaKnown RBP0.41□□□□□ -2.34
HMGN3P1-201ENST00000453847 H3BQF6 201 aa0.41□□□□□ -2.34
HMGN3P1-201ENST00000453847 WFDC2Q14508 124 aa0.41□□□□□ -2.34
HMGN3P1-201ENST00000453847 PIGYQ3MUY2 71 aa0.41□□□□□ -2.34
HMGN3P1-201ENST00000453847 ETDBQ3ZM63 59 aa0.41□□□□□ -2.34
HMGN3P1-201ENST00000453847 C6orf201Q7Z4U5 140 aa0.41□□□□□ -2.34
HMGN3P1-201ENST00000453847 C9orf62Q8N4C0 152 aa0.41□□□□□ -2.34
HMGN3P1-201ENST00000453847 NAV2Q8IVL1 2488 aa0.41□□□□□ -2.34
HMGN3P1-201ENST00000453847 ZFYVE26Q68DK2 2539 aa0.4□□□□□ -2.34
HMGN3P1-201ENST00000453847 CUX1P39880 1505 aa0.4□□□□□ -2.35
HMGN3P1-201ENST00000453847 OTOGQ6ZRI0 2925 aa0.4□□□□□ -2.35
HMGN3P1-201ENST00000453847 FXYD6-FXYD2A0A087WZ82 144 aa0.4□□□□□ -2.35
HMGN3P1-201ENST00000453847 A0A1B0GU69 56 aa0.4□□□□□ -2.35
HMGN3P1-201ENST00000453847 Q9H521 79 aa0.4□□□□□ -2.35
HMGN3P1-201ENST00000453847 TSC2P49815 1807 aa0.4□□□□□ -2.35
HMGN3P1-201ENST00000453847 GOLGA4Q13439 2230 aaKnown RBP0.4□□□□□ -2.35
HMGN3P1-201ENST00000453847 GNG2P59768 71 aa0.39□□□□□ -2.35
HMGN3P1-201ENST00000453847 IQSEC2Q5JU85 1478 aa0.39□□□□□ -2.35
HMGN3P1-201ENST00000453847 RB1CC1Q8TDY2 1594 aa0.39□□□□□ -2.35
HMGN3P1-201ENST00000453847 PIEZO2Q9H5I5 2752 aa0.39□□□□□ -2.35
HMGN3P1-201ENST00000453847 IGF2RP11717 2491 aa0.38□□□□□ -2.35
HMGN3P1-201ENST00000453847 SAMD9Q5K651 1589 aa0.38□□□□□ -2.35
HMGN3P1-201ENST00000453847 K7EQZ3 153 aa0.38□□□□□ -2.35
HMGN3P1-201ENST00000453847 SPINK1P00995 79 aa0.38□□□□□ -2.35
HMGN3P1-201ENST00000453847 ALKQ9UM73 1620 aa0.38□□□□□ -2.35
HMGN3P1-201ENST00000453847 SETBP1Q9Y6X0 1596 aa0.37□□□□□ -2.35
HMGN3P1-201ENST00000453847 K7EP34 96 aa0.37□□□□□ -2.35
HMGN3P1-201ENST00000453847 Q5VSD8 79 aa0.37□□□□□ -2.35
HMGN3P1-201ENST00000453847 ZNF720Q7Z2F6 126 aa0.37□□□□□ -2.35
HMGN3P1-201ENST00000453847 TMEM131LA2VDJ0 1609 aa0.37□□□□□ -2.35
HMGN3P1-201ENST00000453847 PPLO60437 1756 aa0.37□□□□□ -2.35
HMGN3P1-201ENST00000453847 FMN2Q9NZ56 1722 aa0.36□□□□□ -2.35
HMGN3P1-201ENST00000453847 HMGN3Q15651 99 aa0.36□□□□□ -2.35
HMGN3P1-201ENST00000453847 NEXMIFQ5QGS0 1516 aa0.36□□□□□ -2.35
HMGN3P1-201ENST00000453847 URB1O60287 2271 aaKnown RBP0.35□□□□□ -2.35
HMGN3P1-201ENST00000453847 PTPRZ1P23471 2315 aaPredicted RBP0.35□□□□□ -2.35
HMGN3P1-201ENST00000453847 SPRR1AP35321 89 aa0.35□□□□□ -2.35
HMGN3P1-201ENST00000453847 GNGT1P63211 74 aa0.35□□□□□ -2.35
HMGN3P1-201ENST00000453847 DOPEY2Q9Y3R5 2298 aa0.35□□□□□ -2.35
HMGN3P1-201ENST00000453847 MUC5BQ9HC84 5762 aaPredicted RBP0.35□□□□□ -2.35
HMGN3P1-201ENST00000453847 LEPROTL1O95214 131 aa0.34□□□□□ -2.36
HMGN3P1-201ENST00000453847 UBE2D4Q9Y2X8 147 aa0.34□□□□□ -2.36
HMGN3P1-201ENST00000453847 MED14O60244 1454 aa0.34□□□□□ -2.36
HMGN3P1-201ENST00000453847 PTPRQQ9UMZ3 2332 aa0.33□□□□□ -2.36
HMGN3P1-201ENST00000453847 LRRC37AA6NMS7 1700 aa0.33□□□□□ -2.36
HMGN3P1-201ENST00000453847 PKD1L3Q7Z443 1732 aa0.33□□□□□ -2.36
HMGN3P1-201ENST00000453847 D6R8Y8 96 aa0.33□□□□□ -2.36
HMGN3P1-201ENST00000453847 CFDP00746 253 aaPredicted RBP0.33□□□□□ -2.36
HMGN3P1-201ENST00000453847 COX6B1P14854 86 aa0.33□□□□□ -2.36
HMGN3P1-201ENST00000453847 SPRR1BP22528 89 aa0.33□□□□□ -2.36
HMGN3P1-201ENST00000453847 PYY3Q5JQD4 70 aa0.33□□□□□ -2.36
HMGN3P1-201ENST00000453847 MUSTN1Q8IVN3 82 aa0.33□□□□□ -2.36
HMGN3P1-201ENST00000453847 KIF14Q15058 1648 aa0.33□□□□□ -2.36
HMGN3P1-201ENST00000453847 PVALEFA0A1B0GWK0 134 aa0.32□□□□□ -2.36
HMGN3P1-201ENST00000453847 HMGN2P05204 90 aaKnown RBP0.32□□□□□ -2.36
HMGN3P1-201ENST00000453847 DEFB109BQ30KR1 87 aa0.32□□□□□ -2.36
HMGN3P1-201ENST00000453847 CRIPTQ9P021 101 aa0.32□□□□□ -2.36
HMGN3P1-201ENST00000453847 U3KQA8 63 aa0.32□□□□□ -2.36
HMGN3P1-201ENST00000453847 RGPD1P0DJD0 1748 aa0.32□□□□□ -2.36
HMGN3P1-201ENST00000453847 AKAP6Q13023 2319 aa0.31□□□□□ -2.36
HMGN3P1-201ENST00000453847 CELSR1Q9NYQ6 3014 aa0.31□□□□□ -2.36
HMGN3P1-201ENST00000453847 TDRG1Q3Y452 100 aa0.31□□□□□ -2.36
HMGN3P1-201ENST00000453847 MAP3K4Q9Y6R4 1608 aa0.31□□□□□ -2.36
HMGN3P1-201ENST00000453847 NKTRP30414 1462 aaKnown RBP0.3□□□□□ -2.36
HMGN3P1-201ENST00000453847 UNC79Q9P2D8 2635 aa0.3□□□□□ -2.36
HMGN3P1-201ENST00000453847 IGLC2P0DOY2 106 aa0.3□□□□□ -2.36
HMGN3P1-201ENST00000453847 IGLC3P0DOY3 106 aa0.3□□□□□ -2.36
HMGN3P1-201ENST00000453847 S100A16Q96FQ6 103 aaKnown RBP0.3□□□□□ -2.36
HMGN3P1-201ENST00000453847 GVINP1Q7Z2Y8 2422 aa0.3□□□□□ -2.36
HMGN3P1-201ENST00000453847 PLIN4Q96Q06 1357 aa0.3□□□□□ -2.36
HMGN3P1-201ENST00000453847 VWFP04275 2813 aa0.29□□□□□ -2.36
HMGN3P1-201ENST00000453847 CYB5AP00167 134 aa0.29□□□□□ -2.36
HMGN3P1-201ENST00000453847 PEA15Q15121 130 aa0.29□□□□□ -2.36
HMGN3P1-201ENST00000453847 NMSQ5H8A3 153 aa0.29□□□□□ -2.36
HMGN3P1-201ENST00000453847 SPTBN1Q01082 2364 aaKnown RBP0.29□□□□□ -2.36
HMGN3P1-201ENST00000453847 AHNAKQ09666 5890 aaKnown RBP0.29□□□□□ -2.36
HMGN3P1-201ENST00000453847 KIF20BQ96Q89 1820 aa0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms