RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 PLAC8L1A1L4L8 177 aa12.89□□□□□ -0.35
PTPA-223ENST00000452489 BPY2O14599 106 aa12.89□□□□□ -0.35
PTPA-223ENST00000452489 C6orf223Q8N319 242 aa12.89□□□□□ -0.35
PTPA-223ENST00000452489 LOC100131303A0A0U1RQF7 123 aa12.88□□□□□ -0.35
PTPA-223ENST00000452489 PRR15Q8IV56 129 aa12.88□□□□□ -0.35
PTPA-223ENST00000452489 FUSP35637 526 aaKnown RBP eCLIP12.88□□□□□ -0.35
PTPA-223ENST00000452489 PRYO14603 147 aa12.87□□□□□ -0.35
PTPA-223ENST00000452489 LINC00575Q6W349 94 aa12.87□□□□□ -0.35
PTPA-223ENST00000452489 Q6ZTC4 211 aa12.87□□□□□ -0.35
PTPA-223ENST00000452489 NBASA2RRP1 2371 aa12.87□□□□□ -0.35
PTPA-223ENST00000452489 LRCOL1A6NCL2 159 aa12.86□□□□□ -0.35
PTPA-223ENST00000452489 TLN1Q9Y490 2541 aaKnown RBP12.86□□□□□ -0.35
PTPA-223ENST00000452489 INSP01308 110 aa12.85□□□□□ -0.35
PTPA-223ENST00000452489 GNLYP22749 145 aa12.85□□□□□ -0.35
PTPA-223ENST00000452489 Q8N9L7 120 aa12.85□□□□□ -0.35
PTPA-223ENST00000452489 FBXL19-AS1Q494R0 122 aa12.85□□□□□ -0.35
PTPA-223ENST00000452489 Q8NDZ9 215 aa12.84□□□□□ -0.35
PTPA-223ENST00000452489 UBE2E2Q96LR5 201 aa12.83□□□□□ -0.36
PTPA-223ENST00000452489 Q6ZRU5 148 aa12.82□□□□□ -0.36
PTPA-223ENST00000452489 MUC7Q8TAX7 377 aa12.82□□□□□ -0.36
PTPA-223ENST00000452489 C11orf44Q8N8P7 122 aa12.81□□□□□ -0.36
PTPA-223ENST00000452489 HIGD2AQ9BW72 106 aa12.81□□□□□ -0.36
PTPA-223ENST00000452489 ERC2-IT1O76042 136 aa12.81□□□□□ -0.36
PTPA-223ENST00000452489 DAD1P61803 113 aa12.81□□□□□ -0.36
PTPA-223ENST00000452489 MAP1AP78559 2803 aaPredicted RBP12.8□□□□□ -0.36
PTPA-223ENST00000452489 C9orf66Q5T8R8 295 aa12.8□□□□□ -0.36
PTPA-223ENST00000452489 Q6ZQY7 126 aa12.8□□□□□ -0.36
PTPA-223ENST00000452489 MAP6D1Q9H9H5 199 aa12.79□□□□□ -0.36
PTPA-223ENST00000452489 CD164L2Q6UWJ8 174 aa12.79□□□□□ -0.36
PTPA-223ENST00000452489 DYNLRB2Q8TF09 96 aa12.78□□□□□ -0.36
PTPA-223ENST00000452489 OCR1Q9BZK8 76 aa12.78□□□□□ -0.36
PTPA-223ENST00000452489 LINC00959A0A1B0GUT2 108 aa12.77□□□□□ -0.37
PTPA-223ENST00000452489 DEFB136Q30KP8 78 aa12.77□□□□□ -0.37
PTPA-223ENST00000452489 Q6ZRP5 223 aa12.77□□□□□ -0.37
PTPA-223ENST00000452489 C1orf158Q8N1D5 194 aa12.77□□□□□ -0.37
PTPA-223ENST00000452489 SLURP1P55000 103 aa12.77□□□□□ -0.37
PTPA-223ENST00000452489 C9orf116Q5BN46 136 aaPredicted RBP12.77□□□□□ -0.37
PTPA-223ENST00000452489 A0A1W2PRX2 142 aa12.76□□□□□ -0.37
PTPA-223ENST00000452489 RETNQ9HD89 108 aa12.76□□□□□ -0.37
PTPA-223ENST00000452489 OTOGLQ3ZCN5 2332 aa12.75□□□□□ -0.37
PTPA-223ENST00000452489 LINC01006Q8NI28 216 aa12.75□□□□□ -0.37
PTPA-223ENST00000452489 hDV103S1A0JD37 113 aa12.75□□□□□ -0.37
PTPA-223ENST00000452489 PDE6GP18545 87 aa12.75□□□□□ -0.37
PTPA-223ENST00000452489 ADORA2A-AS1P86434 159 aa12.75□□□□□ -0.37
PTPA-223ENST00000452489 KHDC1LQ5JSQ8 128 aa12.75□□□□□ -0.37
PTPA-223ENST00000452489 PSPHP1O15172 72 aa12.74□□□□□ -0.37
PTPA-223ENST00000452489 NOP10Q9NPE3 64 aaKnown RBP12.74□□□□□ -0.37
PTPA-223ENST00000452489 NOTCH3Q9UM47 2321 aa12.74□□□□□ -0.37
PTPA-223ENST00000452489 CLPSL2Q6UWE3 100 aa12.73□□□□□ -0.37
PTPA-223ENST00000452489 Q8IZM0 81 aa12.73□□□□□ -0.37
PTPA-223ENST00000452489 C18orf65Q6ZTR6 163 aa12.73□□□□□ -0.37
PTPA-223ENST00000452489 TRBV6-8A0A0A6YYG3 113 aa12.72□□□□□ -0.37
PTPA-223ENST00000452489 IGKV4-1P06312 121 aa12.72□□□□□ -0.37
PTPA-223ENST00000452489 TRGV2A0A075B6R0 118 aa12.7□□□□□ -0.38
PTPA-223ENST00000452489 IGHV4-61A0A0C4DH41 118 aa12.7□□□□□ -0.38
PTPA-223ENST00000452489 IGHV4-59P01825 116 aa12.7□□□□□ -0.38
PTPA-223ENST00000452489 Q1T7F1 81 aa12.69□□□□□ -0.38
PTPA-223ENST00000452489 NBPF19A0A087WUL8 3843 aa12.69□□□□□ -0.38
PTPA-223ENST00000452489 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.68□□□□□ -0.38
PTPA-223ENST00000452489 LINC01356Q8N9X3 169 aa12.68□□□□□ -0.38
PTPA-223ENST00000452489 A8MU10 97 aa12.67□□□□□ -0.38
PTPA-223ENST00000452489 CD164Q04900 197 aa12.67□□□□□ -0.38
PTPA-223ENST00000452489 C1orf64Q8NEQ6 169 aa12.67□□□□□ -0.38
PTPA-223ENST00000452489 CSPG4Q6UVK1 2322 aa12.67□□□□□ -0.38
PTPA-223ENST00000452489 IGHV4-31P0DP07 118 aa12.66□□□□□ -0.38
PTPA-223ENST00000452489 LINC00269Q8N2A0 174 aa12.66□□□□□ -0.38
PTPA-223ENST00000452489 AKAP9Q99996 3911 aa12.65□□□□□ -0.38
PTPA-223ENST00000452489 TRGV4A0A0C4DH28 118 aa12.65□□□□□ -0.38
PTPA-223ENST00000452489 KIAA0087Q14695 138 aa12.64□□□□□ -0.39
PTPA-223ENST00000452489 CELA1Q9UNI1 258 aa12.64□□□□□ -0.39
PTPA-223ENST00000452489 PLA2G2AP14555 144 aa12.64□□□□□ -0.39
PTPA-223ENST00000452489 LINC00612Q8N6U2 182 aa12.64□□□□□ -0.39
PTPA-223ENST00000452489 WNK1Q9H4A3 2382 aa12.64□□□□□ -0.39
PTPA-223ENST00000452489 TRAV22A0A0B4J277 110 aa12.63□□□□□ -0.39
PTPA-223ENST00000452489 FAM30AQ9NZY2 134 aa12.63□□□□□ -0.39
PTPA-223ENST00000452489 COX17Q14061 63 aa12.62□□□□□ -0.39
PTPA-223ENST00000452489 C10orf25Q5T742 122 aa12.62□□□□□ -0.39
PTPA-223ENST00000452489 ODF3L2Q3SX64 289 aa12.62□□□□□ -0.39
PTPA-223ENST00000452489 STHQ8IWL8 128 aa12.62□□□□□ -0.39
PTPA-223ENST00000452489 CR1P17927 2039 aa12.61□□□□□ -0.39
PTPA-223ENST00000452489 CELSR2Q9HCU4 2923 aa12.6□□□□□ -0.39
PTPA-223ENST00000452489 IGLV6-57P01721 117 aa12.59□□□□□ -0.39
PTPA-223ENST00000452489 DEFB112Q30KQ8 113 aa12.59□□□□□ -0.39
PTPA-223ENST00000452489 COX7BP24311 80 aa12.58□□□□□ -0.4
PTPA-223ENST00000452489 SMIM29Q86T20 159 aa12.58□□□□□ -0.4
PTPA-223ENST00000452489 PRB2P02812 416 aaPredicted RBP12.57□□□□□ -0.4
PTPA-223ENST00000452489 DEFB114Q30KQ6 69 aa12.57□□□□□ -0.4
PTPA-223ENST00000452489 ZFHX2Q9C0A1 2572 aaPredicted RBP12.56□□□□□ -0.4
PTPA-223ENST00000452489 IGLV10-54A0A075B6I4 117 aa12.56□□□□□ -0.4
PTPA-223ENST00000452489 PRR4Q16378 134 aa12.56□□□□□ -0.4
PTPA-223ENST00000452489 KLK12Q9UKR0 248 aa12.56□□□□□ -0.4
PTPA-223ENST00000452489 ITPR1Q14643 2758 aa12.56□□□□□ -0.4
PTPA-223ENST00000452489 A8MUN3 132 aa12.56□□□□□ -0.4
PTPA-223ENST00000452489 C3orf84H3BNL1 204 aa12.55□□□□□ -0.4
PTPA-223ENST00000452489 IGHV4-28A0A0C4DH34 117 aa12.54□□□□□ -0.4
PTPA-223ENST00000452489 H3BQ85 93 aa12.54□□□□□ -0.4
PTPA-223ENST00000452489 ATRXP46100 2492 aa12.53□□□□□ -0.4
PTPA-223ENST00000452489 DIRC1Q969H9 104 aa12.53□□□□□ -0.4
PTPA-223ENST00000452489 ZNF292O60281 2723 aa12.53□□□□□ -0.4
PTPA-223ENST00000452489 CHD6Q8TD26 2715 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms