RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, human

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCG18-238	ENST00000449544	MIR7-3HG	Q8N6C7	128 aa		5.77	□□□□□ -1.49
HCG18-238	ENST00000449544	IGLV4-3	A0A075B6K6	122 aa		5.77	□□□□□ -1.49
HCG18-238	ENST00000449544		A0A1B0GV72	72 aa		5.77	□□□□□ -1.49
HCG18-238	ENST00000449544	HIST1H2BK	O60814	126 aa		5.77	□□□□□ -1.49
HCG18-238	ENST00000449544	HIST1H2BJ	P06899	126 aa		5.77	□□□□□ -1.49
HCG18-238	ENST00000449544	INAFM2	P0DMQ5	153 aa		5.77	□□□□□ -1.49
HCG18-238	ENST00000449544	HIST1H2BO	P23527	126 aa		5.77	□□□□□ -1.49
HCG18-238	ENST00000449544	HIST1H2BB	P33778	126 aa		5.77	□□□□□ -1.49
HCG18-238	ENST00000449544	HIST1H2BD	P58876	126 aa		5.77	□□□□□ -1.49
HCG18-238	ENST00000449544	HIST1H2BC	P62807	126 aa		5.77	□□□□□ -1.49
HCG18-238	ENST00000449544	HIST2H2BE	Q16778	126 aa		5.77	□□□□□ -1.49
HCG18-238	ENST00000449544	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	5.77	□□□□□ -1.49
HCG18-238	ENST00000449544	HIST1H2BH	Q93079	126 aa		5.77	□□□□□ -1.49
HCG18-238	ENST00000449544	HIST1H2BN	Q99877	126 aa		5.77	□□□□□ -1.49
HCG18-238	ENST00000449544	HIST1H2BM	Q99879	126 aa		5.77	□□□□□ -1.49
HCG18-238	ENST00000449544	GAGE2A	Q6NT46	116 aa		5.76	□□□□□ -1.49
HCG18-238	ENST00000449544		Q6ZRP5	223 aa		5.76	□□□□□ -1.49
HCG18-238	ENST00000449544	SPATA45	Q537H7	98 aa		5.76	□□□□□ -1.49
HCG18-238	ENST00000449544	LINC00337	Q8N6G1	96 aa		5.76	□□□□□ -1.49
HCG18-238	ENST00000449544	HRNR	Q86YZ3	2850 aa	Predicted RBP	5.76	□□□□□ -1.49
HCG18-238	ENST00000449544	LINC00528	Q8N1L1	170 aa		5.76	□□□□□ -1.49
HCG18-238	ENST00000449544	SMG1	Q96Q15	3661 aa	Known RBP	5.75	□□□□□ -1.49
HCG18-238	ENST00000449544	POLR2K	P53803	58 aa	Known RBP	5.75	□□□□□ -1.49
HCG18-238	ENST00000449544	TOMM6	Q96B49	74 aa		5.75	□□□□□ -1.49
HCG18-238	ENST00000449544	UPK3B	Q9BT76	320 aa		5.75	□□□□□ -1.49
HCG18-238	ENST00000449544	PRR4	Q16378	134 aa		5.75	□□□□□ -1.49
HCG18-238	ENST00000449544		Q8N3U1	123 aa		5.75	□□□□□ -1.49
HCG18-238	ENST00000449544	DMD	P11532	3685 aa		5.74	□□□□□ -1.49
HCG18-238	ENST00000449544	C2orf48	Q96LS8	159 aa		5.74	□□□□□ -1.49
HCG18-238	ENST00000449544	TENM1	Q9UKZ4	2725 aa		5.74	□□□□□ -1.49
HCG18-238	ENST00000449544	TRBV30	A0A0K0K1B3	111 aa		5.74	□□□□□ -1.49
HCG18-238	ENST00000449544	SYS1-DBNDD2	H3BUS1	97 aa		5.74	□□□□□ -1.49
HCG18-238	ENST00000449544		Q8N814	137 aa		5.74	□□□□□ -1.49
HCG18-238	ENST00000449544	TRAV13-2	A0A0B4J235	113 aa		5.74	□□□□□ -1.49
HCG18-238	ENST00000449544	TINCR	A0A1B0GVN0	87 aa		5.74	□□□□□ -1.49
HCG18-238	ENST00000449544		A8MTW9	85 aa		5.74	□□□□□ -1.49
HCG18-238	ENST00000449544	DAND5	Q8N907	189 aa		5.74	□□□□□ -1.49
HCG18-238	ENST00000449544		Q6ZRU5	148 aa		5.73	□□□□□ -1.49
HCG18-238	ENST00000449544	FAM19A4	Q96LR4	140 aa		5.73	□□□□□ -1.49
HCG18-238	ENST00000449544	HIST3H2BB	Q8N257	126 aa		5.73	□□□□□ -1.49
HCG18-238	ENST00000449544	PYGO1	Q9Y3Y4	419 aa		5.73	□□□□□ -1.49
HCG18-238	ENST00000449544	FLG2	Q5D862	2391 aa	Predicted RBP	5.73	□□□□□ -1.49
HCG18-238	ENST00000449544	CHTF8	P0CG12	524 aa		5.73	□□□□□ -1.49
HCG18-238	ENST00000449544	HIST1H2BL	Q99880	126 aa		5.73	□□□□□ -1.49
HCG18-238	ENST00000449544		A0A087WYN8	130 aa		5.72	□□□□□ -1.49
HCG18-238	ENST00000449544	PCP4	P48539	62 aa		5.72	□□□□□ -1.49
HCG18-238	ENST00000449544	MRPS36	P82909	103 aa	Known RBP	5.72	□□□□□ -1.49
HCG18-238	ENST00000449544	FBN3	Q75N90	2809 aa		5.72	□□□□□ -1.49
HCG18-238	ENST00000449544	C11orf86	A6NJI1	115 aa		5.72	□□□□□ -1.49
HCG18-238	ENST00000449544	IGLV9-49	A0A0B4J1Y8	123 aa		5.71	□□□□□ -1.49
HCG18-238	ENST00000449544	NDUFC2-KCTD14	E9PQ53	114 aa		5.71	□□□□□ -1.49
HCG18-238	ENST00000449544	MRPL52	Q86TS9	123 aa	Known RBP	5.71	□□□□□ -1.49
HCG18-238	ENST00000449544		F8WDY8	70 aa		5.71	□□□□□ -1.5
HCG18-238	ENST00000449544		Q8IZM0	81 aa		5.71	□□□□□ -1.5
HCG18-238	ENST00000449544	RNF185	Q96GF1	192 aa		5.71	□□□□□ -1.5
HCG18-238	ENST00000449544	CIRBP-AS1	Q8TBR5	109 aa		5.7	□□□□□ -1.5
HCG18-238	ENST00000449544	KIF25-AS1	Q9Y6Z4	181 aa		5.7	□□□□□ -1.5
HCG18-238	ENST00000449544	CNFN	Q9BYD5	112 aa		5.7	□□□□□ -1.5
HCG18-238	ENST00000449544	RNF151	Q2KHN1	245 aa		5.69	□□□□□ -1.5
HCG18-238	ENST00000449544	FBN1	P35555	2871 aa	Known RBP	5.69	□□□□□ -1.5
HCG18-238	ENST00000449544	PRSS47	A8MTI9	375 aa		5.69	□□□□□ -1.5
HCG18-238	ENST00000449544		M0R378	163 aa		5.69	□□□□□ -1.5
HCG18-238	ENST00000449544	C3orf79	P0CE67	100 aa		5.69	□□□□□ -1.5
HCG18-238	ENST00000449544	ENHO	Q6UWT2	76 aa		5.69	□□□□□ -1.5
HCG18-238	ENST00000449544	NTM-AS1	Q6ZSK4	140 aa		5.69	□□□□□ -1.5
HCG18-238	ENST00000449544	COX8C	Q7Z4L0	72 aa		5.69	□□□□□ -1.5
HCG18-238	ENST00000449544		Q9UF83	564 aa		5.69	□□□□□ -1.5
HCG18-238	ENST00000449544	COX7B	P24311	80 aa		5.69	□□□□□ -1.5
HCG18-238	ENST00000449544	LINC00612	Q8N6U2	182 aa		5.69	□□□□□ -1.5
HCG18-238	ENST00000449544	LINC00242	Q5T6M2	205 aa		5.68	□□□□□ -1.5
HCG18-238	ENST00000449544	SPINK6	Q6UWN8	80 aa		5.68	□□□□□ -1.5
HCG18-238	ENST00000449544	NRAC	Q8N912	160 aa		5.68	□□□□□ -1.5
HCG18-238	ENST00000449544	CSDC2	Q9Y534	153 aa	Known RBP	5.68	□□□□□ -1.5
HCG18-238	ENST00000449544	NBPF19	A0A087WUL8	3843 aa		5.68	□□□□□ -1.5
HCG18-238	ENST00000449544	CRYGA	P11844	174 aa		5.68	□□□□□ -1.5
HCG18-238	ENST00000449544	MRPL55	Q7Z7F7	128 aa	Known RBP	5.68	□□□□□ -1.5
HCG18-238	ENST00000449544	UQCR10	Q9UDW1	63 aa		5.68	□□□□□ -1.5
HCG18-238	ENST00000449544		A0A1B0GXF2	115 aa		5.67	□□□□□ -1.5
HCG18-238	ENST00000449544	GAS8-AS1	O95177	125 aa		5.67	□□□□□ -1.5
HCG18-238	ENST00000449544	HRCT1	Q6UXD1	115 aa		5.67	□□□□□ -1.5
HCG18-238	ENST00000449544	CELSR1	Q9NYQ6	3014 aa		5.67	□□□□□ -1.5
HCG18-238	ENST00000449544	IFITM1	P13164	125 aa		5.66	□□□□□ -1.5
HCG18-238	ENST00000449544	C9orf163	Q8N9P6	203 aa		5.66	□□□□□ -1.5
HCG18-238	ENST00000449544	TRAV12-1	A0A0B4J245	112 aa		5.65	□□□□□ -1.5
HCG18-238	ENST00000449544	ZNF22	P17026	224 aa	Predicted RBP	5.65	□□□□□ -1.5
HCG18-238	ENST00000449544	BVES-AS1	Q5T3Y7	98 aa		5.65	□□□□□ -1.5
HCG18-238	ENST00000449544		Q5VSD8	79 aa		5.65	□□□□□ -1.5
HCG18-238	ENST00000449544	TYMSOS	Q8TAI1	123 aa		5.65	□□□□□ -1.5
HCG18-238	ENST00000449544	PHF5A	Q7RTV0	110 aa	Known RBP	5.65	□□□□□ -1.51
HCG18-238	ENST00000449544	CDIP1	Q9H305	208 aa		5.65	□□□□□ -1.51
HCG18-238	ENST00000449544	C22orf24	Q9Y442	160 aa		5.65	□□□□□ -1.51
HCG18-238	ENST00000449544	ATXN8	Q156A1	80 aa		5.64	□□□□□ -1.51
HCG18-238	ENST00000449544	SIGMAR1	Q99720	223 aa		5.63	□□□□□ -1.51
HCG18-238	ENST00000449544	SPANXB1	Q9NS25	103 aa	Predicted RBP	5.63	□□□□□ -1.51
HCG18-238	ENST00000449544	NDUFB1	O75438	58 aa		5.63	□□□□□ -1.51
HCG18-238	ENST00000449544	SCX	Q7RTU7	201 aa		5.63	□□□□□ -1.51
HCG18-238	ENST00000449544	PCP2	Q8IVA1	136 aa		5.63	□□□□□ -1.51
HCG18-238	ENST00000449544	SPANXC	Q9NY87	97 aa		5.63	□□□□□ -1.51
HCG18-238	ENST00000449544	TCL1B	O95988	128 aa		5.63	□□□□□ -1.51
HCG18-238	ENST00000449544	COX17	Q14061	63 aa		5.63	□□□□□ -1.51

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