RNA–Protein interactions for RNA: ENST00000449234.1

RFX3-208, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-208ENST00000449234 MYO9AB2RTY4 2548 aa7.93□□□□□ -1.14
RFX3-208ENST00000449234 IGKV3OR2-268A0A0C4DH90 116 aa7.93□□□□□ -1.14
RFX3-208ENST00000449234 NHLRC4P0CG21 123 aaPredicted RBP7.93□□□□□ -1.14
RFX3-208ENST00000449234 FAM218AQ96MZ4 157 aa7.93□□□□□ -1.14
RFX3-208ENST00000449234 LINC00167Q96N53 147 aa7.93□□□□□ -1.14
RFX3-208ENST00000449234 KLK5Q9Y337 293 aaPredicted RBP7.93□□□□□ -1.14
RFX3-208ENST00000449234 C22orf24Q9Y442 160 aa7.93□□□□□ -1.14
RFX3-208ENST00000449234 VPS13CQ709C8 3753 aa7.92□□□□□ -1.14
RFX3-208ENST00000449234 APCP25054 2843 aa7.92□□□□□ -1.14
RFX3-208ENST00000449234 MAP1AP78559 2803 aaPredicted RBP7.92□□□□□ -1.14
RFX3-208ENST00000449234 ZFHX3Q15911 3703 aa7.92□□□□□ -1.14
RFX3-208ENST00000449234 KIAA0087Q14695 138 aa7.92□□□□□ -1.14
RFX3-208ENST00000449234 CFAP161Q6P656 301 aa7.92□□□□□ -1.14
RFX3-208ENST00000449234 ITPR3Q14573 2671 aa7.91□□□□□ -1.14
RFX3-208ENST00000449234 H3BQ85 93 aa7.91□□□□□ -1.14
RFX3-208ENST00000449234 PFN2P35080 140 aa7.91□□□□□ -1.14
RFX3-208ENST00000449234 DAD1P61803 113 aa7.91□□□□□ -1.14
RFX3-208ENST00000449234 WFDC9Q8NEX5 89 aa7.91□□□□□ -1.14
RFX3-208ENST00000449234 TMEM126AQ9H061 195 aa7.91□□□□□ -1.14
RFX3-208ENST00000449234 CRYBG3Q68DQ2 2970 aa7.9□□□□□ -1.14
RFX3-208ENST00000449234 SPART-AS1P0CW21 52 aa7.9□□□□□ -1.14
RFX3-208ENST00000449234 XCL1P47992 114 aa7.9□□□□□ -1.14
RFX3-208ENST00000449234 LELP1Q5T871 98 aa7.9□□□□□ -1.14
RFX3-208ENST00000449234 OR13C6PQ8NH95 151 aa7.9□□□□□ -1.14
RFX3-208ENST00000449234 CHCHD10Q8WYQ3 142 aaPredicted RBP7.89□□□□□ -1.15
RFX3-208ENST00000449234 ORMDL1Q9P0S3 153 aa7.89□□□□□ -1.15
RFX3-208ENST00000449234 ABCA12Q86UK0 2595 aa7.89□□□□□ -1.15
RFX3-208ENST00000449234 CHD6Q8TD26 2715 aa7.88□□□□□ -1.15
RFX3-208ENST00000449234 JMJD7-PLA2G4BH0Y9G9 81 aa7.88□□□□□ -1.15
RFX3-208ENST00000449234 REG3AQ06141 175 aa7.88□□□□□ -1.15
RFX3-208ENST00000449234 LINC00269Q8N2A0 174 aa7.88□□□□□ -1.15
RFX3-208ENST00000449234 A0A0J9YWU9 116 aa7.87□□□□□ -1.15
RFX3-208ENST00000449234 H3BNG1 76 aa7.87□□□□□ -1.15
RFX3-208ENST00000449234 IGHV4-30-4P0DP06 118 aa7.87□□□□□ -1.15
RFX3-208ENST00000449234 A0A087WYN8 130 aa7.86□□□□□ -1.15
RFX3-208ENST00000449234 GVQW2A0A096LPI5 108 aaPredicted RBP7.86□□□□□ -1.15
RFX3-208ENST00000449234 TMEM256-PLSCR3K7ERE1 68 aa7.86□□□□□ -1.15
RFX3-208ENST00000449234 LECT2O14960 151 aa7.86□□□□□ -1.15
RFX3-208ENST00000449234 Q8NAQ8 132 aa7.86□□□□□ -1.15
RFX3-208ENST00000449234 Q9HAA7 133 aa7.86□□□□□ -1.15
RFX3-208ENST00000449234 PRR34Q9NV39 138 aa7.86□□□□□ -1.15
RFX3-208ENST00000449234 WNK1Q9H4A3 2382 aa7.86□□□□□ -1.15
RFX3-208ENST00000449234 CENPEQ02224 2701 aa7.86□□□□□ -1.15
RFX3-208ENST00000449234 ANGP03950 147 aaKnown RBP7.85□□□□□ -1.15
RFX3-208ENST00000449234 S100A7L2Q5SY68 101 aa7.85□□□□□ -1.15
RFX3-208ENST00000449234 PDZD2O15018 2839 aa7.85□□□□□ -1.15
RFX3-208ENST00000449234 ZFYVE26Q68DK2 2539 aa7.84□□□□□ -1.15
RFX3-208ENST00000449234 DEFB135Q30KP9 77 aa7.84□□□□□ -1.15
RFX3-208ENST00000449234 Q6JHZ5 121 aa7.84□□□□□ -1.15
RFX3-208ENST00000449234 GAGE2AQ6NT46 116 aa7.84□□□□□ -1.15
RFX3-208ENST00000449234 Q8N814 137 aa7.84□□□□□ -1.15
RFX3-208ENST00000449234 NANOS2P60321 138 aaKnown RBP7.83□□□□□ -1.16
RFX3-208ENST00000449234 EPG5Q9HCE0 2579 aa7.83□□□□□ -1.16
RFX3-208ENST00000449234 F8WDY8 70 aa7.82□□□□□ -1.16
RFX3-208ENST00000449234 CCKP06307 115 aa7.82□□□□□ -1.16
RFX3-208ENST00000449234 SMCR5Q8TEV8 140 aa7.82□□□□□ -1.16
RFX3-208ENST00000449234 SMR3AQ99954 134 aa7.82□□□□□ -1.16
RFX3-208ENST00000449234 TLN2Q9Y4G6 2542 aa7.82□□□□□ -1.16
RFX3-208ENST00000449234 FLNAP21333 2647 aaKnown RBP7.81□□□□□ -1.16
RFX3-208ENST00000449234 A0A096LPF7 62 aa7.8□□□□□ -1.16
RFX3-208ENST00000449234 SPAG11BQ08648 103 aa7.8□□□□□ -1.16
RFX3-208ENST00000449234 SONP18583 2426 aaKnown RBP7.8□□□□□ -1.16
RFX3-208ENST00000449234 AKAP9Q99996 3911 aa7.8□□□□□ -1.16
RFX3-208ENST00000449234 B5MCH6 92 aa7.79□□□□□ -1.16
RFX3-208ENST00000449234 CLPSL2Q6UWE3 100 aa7.79□□□□□ -1.16
RFX3-208ENST00000449234 LYPD5Q6UWN5 251 aa7.79□□□□□ -1.16
RFX3-208ENST00000449234 LINC00575Q6W349 94 aa7.79□□□□□ -1.16
RFX3-208ENST00000449234 C11orf68Q9H3H3 251 aaKnown RBP7.79□□□□□ -1.16
RFX3-208ENST00000449234 TRBV7-6A0A0J9YX20 115 aa7.78□□□□□ -1.16
RFX3-208ENST00000449234 FAM236AA0A1B0GUQ0 79 aa7.78□□□□□ -1.16
RFX3-208ENST00000449234 FAM236BA0A1B0GV22 79 aa7.78□□□□□ -1.16
RFX3-208ENST00000449234 INAFM1C9JVW0 142 aa7.78□□□□□ -1.16
RFX3-208ENST00000449234 CCDC179H3BU77 68 aa7.78□□□□□ -1.16
RFX3-208ENST00000449234 PDE6GP18545 87 aa7.78□□□□□ -1.16
RFX3-208ENST00000449234 HIST1H4AP62805 103 aaKnown RBP7.78□□□□□ -1.16
RFX3-208ENST00000449234 ATP5EP2Q5VTU8 51 aa7.78□□□□□ -1.16
RFX3-208ENST00000449234 C14orf132Q9NPU4 83 aa7.78□□□□□ -1.16
RFX3-208ENST00000449234 CELA1Q9UNI1 258 aa7.78□□□□□ -1.16
RFX3-208ENST00000449234 TRBV10-3A0A0K0K1G6 114 aa7.77□□□□□ -1.17
RFX3-208ENST00000449234 ATOX1O00244 68 aa7.77□□□□□ -1.17
RFX3-208ENST00000449234 UQCRQO14949 82 aa7.77□□□□□ -1.17
RFX3-208ENST00000449234 IGLV6-57P01721 117 aa7.77□□□□□ -1.17
RFX3-208ENST00000449234 NOTCH3Q9UM47 2321 aa7.77□□□□□ -1.17
RFX3-208ENST00000449234 hADV29S1A0JD25 119 aa7.76□□□□□ -1.17
RFX3-208ENST00000449234 CYSRT1A8MQ03 144 aa7.76□□□□□ -1.17
RFX3-208ENST00000449234 ENHOQ6UWT2 76 aa7.76□□□□□ -1.17
RFX3-208ENST00000449234 UNQ6190/PRO20217Q6UXQ8 127 aa7.76□□□□□ -1.17
RFX3-208ENST00000449234 C3orf22Q8N5N4 141 aa7.76□□□□□ -1.17
RFX3-208ENST00000449234 SETXQ7Z333 2677 aaKnown RBP7.76□□□□□ -1.17
RFX3-208ENST00000449234 ANK3Q12955 4377 aaKnown RBP7.76□□□□□ -1.17
RFX3-208ENST00000449234 HIVEP2P31629 2446 aa7.76□□□□□ -1.17
RFX3-208ENST00000449234 IGLV10-54A0A075B6I4 117 aa7.75□□□□□ -1.17
RFX3-208ENST00000449234 DEFB4AO15263 64 aa7.75□□□□□ -1.17
RFX3-208ENST00000449234 C6orf99Q4VX62 202 aa7.75□□□□□ -1.17
RFX3-208ENST00000449234 LINC00526Q96FQ7 95 aa7.75□□□□□ -1.17
RFX3-208ENST00000449234 C2orf48Q96LS8 159 aa7.75□□□□□ -1.17
RFX3-208ENST00000449234 LINC00846Q9NV44 126 aa7.75□□□□□ -1.17
RFX3-208ENST00000449234 KLK12Q9UKR0 248 aa7.75□□□□□ -1.17
RFX3-208ENST00000449234 LOC110117498A0A087WWA1 95 aa7.74□□□□□ -1.17
RFX3-208ENST00000449234 ZNF561-AS1K7EIQ3 104 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms