RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 PET117Q6UWS5 81 aa8.86□□□□□ -0.99
PDLIM2-213ENST00000448520 LINC00526Q96FQ7 95 aa8.86□□□□□ -0.99
PDLIM2-213ENST00000448520 IGLV5-45A0A087WSX0 123 aa8.85□□□□□ -0.99
PDLIM2-213ENST00000448520 SPINK8P0C7L1 97 aa8.85□□□□□ -0.99
PDLIM2-213ENST00000448520 SEC11AP67812 179 aa8.85□□□□□ -0.99
PDLIM2-213ENST00000448520 IGHV3-64A0A075B6Q5 118 aa8.84□□□□□ -0.99
PDLIM2-213ENST00000448520 A0A087WZ39 114 aa8.84□□□□□ -0.99
PDLIM2-213ENST00000448520 DPM2O94777 84 aa8.84□□□□□ -0.99
PDLIM2-213ENST00000448520 MALP21145 153 aa8.84□□□□□ -0.99
PDLIM2-213ENST00000448520 TMEM170BQ5T4T1 132 aa8.84□□□□□ -0.99
PDLIM2-213ENST00000448520 ATOH7Q8N100 152 aa8.84□□□□□ -0.99
PDLIM2-213ENST00000448520 C9orf163Q8N9P6 203 aa8.84□□□□□ -0.99
PDLIM2-213ENST00000448520 LRP1Q07954 4544 aaKnown RBP8.84□□□□□ -0.99
PDLIM2-213ENST00000448520 SMIM1B2RUZ4 78 aa8.83□□□□□ -1
PDLIM2-213ENST00000448520 RPL37AP61513 92 aaKnown RBP8.83□□□□□ -1
PDLIM2-213ENST00000448520 IGHV1-58A0A0C4DH39 117 aa8.82□□□□□ -1
PDLIM2-213ENST00000448520 IGKCP01834 107 aa8.82□□□□□ -1
PDLIM2-213ENST00000448520 ORAOV1Q8WV07 137 aa8.82□□□□□ -1
PDLIM2-213ENST00000448520 PLNP26678 52 aa8.81□□□□□ -1
PDLIM2-213ENST00000448520 hDV102S1A0JD36 115 aa8.8□□□□□ -1
PDLIM2-213ENST00000448520 TMEM223A0PJW6 202 aa8.8□□□□□ -1
PDLIM2-213ENST00000448520 C20orf202A1L168 122 aa8.8□□□□□ -1
PDLIM2-213ENST00000448520 SPAG11BQ08648 103 aa8.8□□□□□ -1
PDLIM2-213ENST00000448520 TOMM7Q9P0U1 55 aa8.8□□□□□ -1
PDLIM2-213ENST00000448520 FAT3Q8TDW7 4589 aa8.8□□□□□ -1
PDLIM2-213ENST00000448520 GVQW2A0A096LPI5 108 aaPredicted RBP8.79□□□□□ -1
PDLIM2-213ENST00000448520 H3BRM9 83 aa8.79□□□□□ -1
PDLIM2-213ENST00000448520 APOMO95445 188 aa8.79□□□□□ -1
PDLIM2-213ENST00000448520 SCGB1D1O95968 90 aa8.79□□□□□ -1
PDLIM2-213ENST00000448520 SLPIP03973 132 aa8.79□□□□□ -1
PDLIM2-213ENST00000448520 SDIM1Q6ZPB5 146 aa8.79□□□□□ -1
PDLIM2-213ENST00000448520 LINC00518Q8N0U6 118 aa8.79□□□□□ -1
PDLIM2-213ENST00000448520 STPG4Q8N801 248 aa8.79□□□□□ -1
PDLIM2-213ENST00000448520 PLA2G2DQ9UNK4 145 aa8.79□□□□□ -1
PDLIM2-213ENST00000448520 KIAA0087Q14695 138 aa8.78□□□□□ -1
PDLIM2-213ENST00000448520 MAJINQ3KP22 176 aa8.78□□□□□ -1
PDLIM2-213ENST00000448520 CFAP161Q6P656 301 aa8.78□□□□□ -1
PDLIM2-213ENST00000448520 LINC01561Q8N1V8 128 aa8.78□□□□□ -1
PDLIM2-213ENST00000448520 IGLV5-39A0A0G2JS06 123 aa8.77□□□□□ -1.01
PDLIM2-213ENST00000448520 AKR1D1P51857 326 aa8.77□□□□□ -1.01
PDLIM2-213ENST00000448520 C2orf82Q6UX34 121 aa8.77□□□□□ -1.01
PDLIM2-213ENST00000448520 PKHD1L1Q86WI1 4243 aa8.77□□□□□ -1.01
PDLIM2-213ENST00000448520 ZNF561-AS1K7EIQ3 104 aa8.76□□□□□ -1.01
PDLIM2-213ENST00000448520 TSPEAR-AS2P59090 65 aa8.76□□□□□ -1.01
PDLIM2-213ENST00000448520 CNBPP62633 177 aaKnown RBP8.76□□□□□ -1.01
PDLIM2-213ENST00000448520 C10orf25Q5T742 122 aa8.76□□□□□ -1.01
PDLIM2-213ENST00000448520 COX7B2Q8TF08 81 aa8.76□□□□□ -1.01
PDLIM2-213ENST00000448520 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.76□□□□□ -1.01
PDLIM2-213ENST00000448520 JOSD1Q15040 202 aaPredicted RBP8.75□□□□□ -1.01
PDLIM2-213ENST00000448520 ANKRD39Q53RE8 183 aa8.75□□□□□ -1.01
PDLIM2-213ENST00000448520 PYY3Q5JQD4 70 aa8.75□□□□□ -1.01
PDLIM2-213ENST00000448520 Q6ZRU5 148 aa8.75□□□□□ -1.01
PDLIM2-213ENST00000448520 DPH3Q96FX2 82 aa8.75□□□□□ -1.01
PDLIM2-213ENST00000448520 IGKV2D-26A0A0A0MRZ7 120 aa8.74□□□□□ -1.01
PDLIM2-213ENST00000448520 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.74□□□□□ -1.01
PDLIM2-213ENST00000448520 PRSS2P07478 247 aa8.74□□□□□ -1.01
PDLIM2-213ENST00000448520 HNRNPA3P51991 378 aaKnown RBP8.74□□□□□ -1.01
PDLIM2-213ENST00000448520 CIRBPQ14011 172 aaKnown RBP8.74□□□□□ -1.01
PDLIM2-213ENST00000448520 UNQ6190/PRO20217Q6UXQ8 127 aa8.74□□□□□ -1.01
PDLIM2-213ENST00000448520 Q8IZM0 81 aa8.74□□□□□ -1.01
PDLIM2-213ENST00000448520 CAMK2N2Q96S95 79 aa8.74□□□□□ -1.01
PDLIM2-213ENST00000448520 SMIM6P0DI80 62 aa8.73□□□□□ -1.01
PDLIM2-213ENST00000448520 HERVK_113P61574 105 aa8.73□□□□□ -1.01
PDLIM2-213ENST00000448520 S100A12P80511 92 aa8.73□□□□□ -1.01
PDLIM2-213ENST00000448520 C6orf226Q5I0X4 101 aa8.73□□□□□ -1.01
PDLIM2-213ENST00000448520 PANO1I0J062 215 aa8.72□□□□□ -1.01
PDLIM2-213ENST00000448520 LEPROTO15243 131 aa8.72□□□□□ -1.01
PDLIM2-213ENST00000448520 SYCNQ0VAF6 134 aa8.72□□□□□ -1.01
PDLIM2-213ENST00000448520 TTTY13Q9BZ97 58 aa8.72□□□□□ -1.01
PDLIM2-213ENST00000448520 HMCN2Q8NDA2 5059 aa8.71□□□□□ -1.01
PDLIM2-213ENST00000448520 E9PLD3 99 aa8.71□□□□□ -1.02
PDLIM2-213ENST00000448520 C2orf48Q96LS8 159 aa8.71□□□□□ -1.02
PDLIM2-213ENST00000448520 CARD19Q96LW7 228 aa8.71□□□□□ -1.02
PDLIM2-213ENST00000448520 C6orf48Q9UBA6 75 aa8.71□□□□□ -1.02
PDLIM2-213ENST00000448520 J3QQQ9 107 aa8.7□□□□□ -1.02
PDLIM2-213ENST00000448520 NDUFA1O15239 70 aa8.7□□□□□ -1.02
PDLIM2-213ENST00000448520 CKS1BP61024 79 aa8.7□□□□□ -1.02
PDLIM2-213ENST00000448520 C9orf116Q5BN46 136 aaPredicted RBP8.7□□□□□ -1.02
PDLIM2-213ENST00000448520 PLEKHB2Q96CS7 222 aa8.7□□□□□ -1.02
PDLIM2-213ENST00000448520 ZNF625Q96I27 306 aaPredicted RBP8.7□□□□□ -1.02
PDLIM2-213ENST00000448520 A0A087WYN8 130 aa8.69□□□□□ -1.02
PDLIM2-213ENST00000448520 MT1HL1P0DM35 61 aa8.68□□□□□ -1.02
PDLIM2-213ENST00000448520 LGALS3P17931 250 aaKnown RBP8.68□□□□□ -1.02
PDLIM2-213ENST00000448520 NMUP48645 174 aa8.68□□□□□ -1.02
PDLIM2-213ENST00000448520 C12orf57Q99622 126 aa8.68□□□□□ -1.02
PDLIM2-213ENST00000448520 TP73-AS1Q9UF72 201 aa8.68□□□□□ -1.02
PDLIM2-213ENST00000448520 NDUFA12Q9UI09 145 aa8.68□□□□□ -1.02
PDLIM2-213ENST00000448520 CXCL5P42830 114 aa8.67□□□□□ -1.02
PDLIM2-213ENST00000448520 PCP2Q8IVA1 136 aa8.67□□□□□ -1.02
PDLIM2-213ENST00000448520 SPACA4Q8TDM5 124 aa8.67□□□□□ -1.02
PDLIM2-213ENST00000448520 PLAC8Q9NZF1 115 aa8.67□□□□□ -1.02
PDLIM2-213ENST00000448520 PAM16Q9Y3D7 125 aa8.67□□□□□ -1.02
PDLIM2-213ENST00000448520 HSBP1L1C9JCN9 74 aa8.66□□□□□ -1.02
PDLIM2-213ENST00000448520 C7orf33Q8WU49 177 aa8.66□□□□□ -1.02
PDLIM2-213ENST00000448520 UBR4Q5T4S7 5183 aa8.65□□□□□ -1.02
PDLIM2-213ENST00000448520 F8WDY8 70 aa8.65□□□□□ -1.02
PDLIM2-213ENST00000448520 CHTF8P0CG12 524 aa8.65□□□□□ -1.02
PDLIM2-213ENST00000448520 VAMP8Q9BV40 100 aa8.65□□□□□ -1.02
PDLIM2-213ENST00000448520 TRBV30A0A0K0K1B3 111 aa8.64□□□□□ -1.03
PDLIM2-213ENST00000448520 A0A0U1RRA0 63 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms