RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 PLAC8Q9NZF1 115 aa7.84□□□□□ -1.15
SSR4-205ENST00000447375 LINC00474Q9P2X8 69 aa7.84□□□□□ -1.15
SSR4-205ENST00000447375 IGLV5-45A0A087WSX0 123 aa7.83□□□□□ -1.16
SSR4-205ENST00000447375 IGKV2-24A0A0C4DH68 120 aa7.83□□□□□ -1.16
SSR4-205ENST00000447375 LOC107984640A0A0U1RRK4 108 aa7.83□□□□□ -1.16
SSR4-205ENST00000447375 NDUFA1O15239 70 aa7.83□□□□□ -1.16
SSR4-205ENST00000447375 MAJINQ3KP22 176 aa7.83□□□□□ -1.16
SSR4-205ENST00000447375 C10orf25Q5T742 122 aa7.83□□□□□ -1.16
SSR4-205ENST00000447375 UNQ6190/PRO20217Q6UXQ8 127 aa7.83□□□□□ -1.16
SSR4-205ENST00000447375 LPAP08519 4548 aa7.83□□□□□ -1.16
SSR4-205ENST00000447375 ATP5LO75964 103 aa7.82□□□□□ -1.16
SSR4-205ENST00000447375 PTTG1IPP53801 180 aa7.81□□□□□ -1.16
SSR4-205ENST00000447375 BAGE3Q86Y29 109 aa7.81□□□□□ -1.16
SSR4-205ENST00000447375 Q8IZM0 81 aa7.81□□□□□ -1.16
SSR4-205ENST00000447375 LINC00469Q8N7U9 141 aa7.81□□□□□ -1.16
SSR4-205ENST00000447375 SCO1O75880 301 aa7.8□□□□□ -1.16
SSR4-205ENST00000447375 NDUFA6P56556 154 aa7.8□□□□□ -1.16
SSR4-205ENST00000447375 C6orf226Q5I0X4 101 aa7.8□□□□□ -1.16
SSR4-205ENST00000447375 C2orf82Q6UX34 121 aa7.8□□□□□ -1.16
SSR4-205ENST00000447375 STPG4Q8N801 248 aa7.8□□□□□ -1.16
SSR4-205ENST00000447375 PACRGQ96M98 296 aaPredicted RBP7.8□□□□□ -1.16
SSR4-205ENST00000447375 C6orf48Q9UBA6 75 aa7.8□□□□□ -1.16
SSR4-205ENST00000447375 FAT4Q6V0I7 4981 aa7.8□□□□□ -1.16
SSR4-205ENST00000447375 TRBV30A0A0K0K1B3 111 aa7.79□□□□□ -1.16
SSR4-205ENST00000447375 SMIM1B2RUZ4 78 aa7.79□□□□□ -1.16
SSR4-205ENST00000447375 PRSS2P07478 247 aa7.79□□□□□ -1.16
SSR4-205ENST00000447375 TLX1NBP0CAT3 122 aa7.79□□□□□ -1.16
SSR4-205ENST00000447375 IGLC3P0DOY3 106 aa7.79□□□□□ -1.16
SSR4-205ENST00000447375 GAGE2BQ13066 116 aa7.79□□□□□ -1.16
SSR4-205ENST00000447375 HSBP1O75506 76 aa7.78□□□□□ -1.16
SSR4-205ENST00000447375 LINC00310P59036 64 aa7.78□□□□□ -1.16
SSR4-205ENST00000447375 CKS1BP61024 79 aa7.78□□□□□ -1.16
SSR4-205ENST00000447375 LINC01600Q96MT4 127 aa7.78□□□□□ -1.16
SSR4-205ENST00000447375 TOMM7Q9P0U1 55 aa7.78□□□□□ -1.16
SSR4-205ENST00000447375 RPL18AQ02543 176 aaKnown RBP7.77□□□□□ -1.17
SSR4-205ENST00000447375 FAM19A2Q8N3H0 131 aa7.77□□□□□ -1.17
SSR4-205ENST00000447375 IFI27L1Q96BM0 104 aa7.77□□□□□ -1.17
SSR4-205ENST00000447375 H3BRM9 83 aa7.76□□□□□ -1.17
SSR4-205ENST00000447375 SERF1AO75920 110 aa7.76□□□□□ -1.17
SSR4-205ENST00000447375 SPINK8P0C7L1 97 aa7.76□□□□□ -1.17
SSR4-205ENST00000447375 Q6ZRP5 223 aa7.76□□□□□ -1.17
SSR4-205ENST00000447375 TRAV12-1A0A0B4J245 112 aa7.75□□□□□ -1.17
SSR4-205ENST00000447375 IGLV5-39A0A0G2JS06 123 aa7.75□□□□□ -1.17
SSR4-205ENST00000447375 A0A1W2PNN7 141 aa7.75□□□□□ -1.17
SSR4-205ENST00000447375 NDUFC2-KCTD14E9PQ53 114 aa7.75□□□□□ -1.17
SSR4-205ENST00000447375 F8VRH5 84 aa7.75□□□□□ -1.17
SSR4-205ENST00000447375 NUPR1O60356 82 aa7.75□□□□□ -1.17
SSR4-205ENST00000447375 ZNF22P17026 224 aaPredicted RBP7.75□□□□□ -1.17
SSR4-205ENST00000447375 CXCL5P42830 114 aa7.75□□□□□ -1.17
SSR4-205ENST00000447375 C9orf116Q5BN46 136 aaPredicted RBP7.75□□□□□ -1.17
SSR4-205ENST00000447375 COX7B2Q8TF08 81 aa7.75□□□□□ -1.17
SSR4-205ENST00000447375 MUC2Q02817 5179 aa7.74□□□□□ -1.17
SSR4-205ENST00000447375 C11orf86A6NJI1 115 aa7.74□□□□□ -1.17
SSR4-205ENST00000447375 C7orf33Q8WU49 177 aa7.74□□□□□ -1.17
SSR4-205ENST00000447375 CHTOPQ9Y3Y2 248 aaKnown RBP7.74□□□□□ -1.17
SSR4-205ENST00000447375 A0A0U1RQV1 116 aa7.72□□□□□ -1.17
SSR4-205ENST00000447375 HIST1H2BKO60814 126 aa7.72□□□□□ -1.17
SSR4-205ENST00000447375 LEPROTL1O95214 131 aa7.72□□□□□ -1.17
SSR4-205ENST00000447375 HIST1H2BJP06899 126 aa7.72□□□□□ -1.17
SSR4-205ENST00000447375 HIST1H2BOP23527 126 aa7.72□□□□□ -1.17
SSR4-205ENST00000447375 HIST1H2BBP33778 126 aa7.72□□□□□ -1.17
SSR4-205ENST00000447375 HIST1H2BDP58876 126 aa7.72□□□□□ -1.17
SSR4-205ENST00000447375 HIST1H2BCP62807 126 aa7.72□□□□□ -1.17
SSR4-205ENST00000447375 HIST2H2BEQ16778 126 aa7.72□□□□□ -1.17
SSR4-205ENST00000447375 GAGE2EQ4V326 116 aa7.72□□□□□ -1.17
SSR4-205ENST00000447375 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.72□□□□□ -1.17
SSR4-205ENST00000447375 HIST1H2BHQ93079 126 aa7.72□□□□□ -1.17
SSR4-205ENST00000447375 HIST1H2BNQ99877 126 aa7.72□□□□□ -1.17
SSR4-205ENST00000447375 HIST1H2BMQ99879 126 aa7.72□□□□□ -1.17
SSR4-205ENST00000447375 GAGE2DQ9UEU5 116 aa7.72□□□□□ -1.17
SSR4-205ENST00000447375 KRTAP10-8P60410 259 aa7.71□□□□□ -1.18
SSR4-205ENST00000447375 TMEM170BQ5T4T1 132 aa7.71□□□□□ -1.18
SSR4-205ENST00000447375 HSPB8Q9UJY1 196 aa7.71□□□□□ -1.18
SSR4-205ENST00000447375 FAM168BA1KXE4 195 aa7.7□□□□□ -1.18
SSR4-205ENST00000447375 C9orf129Q5T035 196 aaKnown RBP7.7□□□□□ -1.18
SSR4-205ENST00000447375 S100A1P23297 94 aa7.69□□□□□ -1.18
SSR4-205ENST00000447375 KRTAP7-1Q8IUC3 87 aa7.69□□□□□ -1.18
SSR4-205ENST00000447375 TMEM223A0PJW6 202 aa7.68□□□□□ -1.18
SSR4-205ENST00000447375 FABP4P15090 132 aa7.68□□□□□ -1.18
SSR4-205ENST00000447375 PRR3P79522 188 aaKnown RBP7.68□□□□□ -1.18
SSR4-205ENST00000447375 PHF5AQ7RTV0 110 aaKnown RBP7.67□□□□□ -1.18
SSR4-205ENST00000447375 H0Y8G0 127 aa7.66□□□□□ -1.18
SSR4-205ENST00000447375 COA6Q5JTJ3 125 aaKnown RBP7.66□□□□□ -1.18
SSR4-205ENST00000447375 SFTA2Q6UW10 78 aa7.66□□□□□ -1.18
SSR4-205ENST00000447375 FAM19A5Q7Z5A7 132 aaPredicted RBP7.66□□□□□ -1.18
SSR4-205ENST00000447375 XAGE1AQ9HD64 81 aa7.66□□□□□ -1.18
SSR4-205ENST00000447375 ATP6V1G1O75348 118 aa7.65□□□□□ -1.18
SSR4-205ENST00000447375 LCE2AQ5TA79 106 aaPredicted RBP7.65□□□□□ -1.18
SSR4-205ENST00000447375 ZNF625Q96I27 306 aaPredicted RBP7.65□□□□□ -1.18
SSR4-205ENST00000447375 MAP1LC3CQ9BXW4 147 aa7.65□□□□□ -1.18
SSR4-205ENST00000447375 PLNP26678 52 aa7.64□□□□□ -1.19
SSR4-205ENST00000447375 COX17Q14061 63 aa7.64□□□□□ -1.19
SSR4-205ENST00000447375 PSORS1C2Q9UIG4 136 aa7.64□□□□□ -1.19
SSR4-205ENST00000447375 M0QXV9 152 aa7.63□□□□□ -1.19
SSR4-205ENST00000447375 DPM2O94777 84 aa7.63□□□□□ -1.19
SSR4-205ENST00000447375 SRSF9Q13242 221 aaKnown RBP eCLIP7.63□□□□□ -1.19
SSR4-205ENST00000447375 REG3GQ6UW15 175 aa7.63□□□□□ -1.19
SSR4-205ENST00000447375 KRTAP11-1Q8IUC1 163 aa7.63□□□□□ -1.19
SSR4-205ENST00000447375 ERG28Q9UKR5 140 aa7.63□□□□□ -1.19
SSR4-205ENST00000447375 PFN2P35080 140 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms