RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 MRPS36P82909 103 aaKnown RBP4.23□□□□□ -1.73
LRRC28-203ENST00000447360 SMAGPQ0VAQ4 97 aa4.23□□□□□ -1.73
LRRC28-203ENST00000447360 C9orf116Q5BN46 136 aaPredicted RBP4.23□□□□□ -1.73
LRRC28-203ENST00000447360 C5orf38Q86SI9 138 aa4.23□□□□□ -1.73
LRRC28-203ENST00000447360 IGLV4-69A0A075B6H9 119 aa4.22□□□□□ -1.73
LRRC28-203ENST00000447360 IGHV3OR16-9A0A0B4J2B5 98 aa4.22□□□□□ -1.73
LRRC28-203ENST00000447360 COX7A2LO14548 114 aa4.22□□□□□ -1.73
LRRC28-203ENST00000447360 PHF5AQ7RTV0 110 aaKnown RBP4.22□□□□□ -1.73
LRRC28-203ENST00000447360 Q8N8P6 123 aa4.22□□□□□ -1.73
LRRC28-203ENST00000447360 MPLKIPQ8TAP9 179 aa4.22□□□□□ -1.73
LRRC28-203ENST00000447360 IMMP2LQ96T52 175 aa4.22□□□□□ -1.73
LRRC28-203ENST00000447360 PYGO1Q9Y3Y4 419 aa4.22□□□□□ -1.73
LRRC28-203ENST00000447360 IGLV4-3A0A075B6K6 122 aa4.21□□□□□ -1.74
LRRC28-203ENST00000447360 A0A087WZ39 114 aa4.21□□□□□ -1.74
LRRC28-203ENST00000447360 APOMO95445 188 aa4.21□□□□□ -1.74
LRRC28-203ENST00000447360 RAB5AP20339 215 aa4.21□□□□□ -1.74
LRRC28-203ENST00000447360 S100A1P23297 94 aa4.21□□□□□ -1.74
LRRC28-203ENST00000447360 RHEBQ15382 184 aa4.21□□□□□ -1.74
LRRC28-203ENST00000447360 SVBPQ8N300 66 aa4.21□□□□□ -1.74
LRRC28-203ENST00000447360 SPANXA1Q9NS26 97 aa4.21□□□□□ -1.74
LRRC28-203ENST00000447360 LAMTOR2Q9Y2Q5 125 aa4.21□□□□□ -1.74
LRRC28-203ENST00000447360 TRAV9-1A0A075B6T8 112 aa4.2□□□□□ -1.74
LRRC28-203ENST00000447360 ATP6V1G1O75348 118 aa4.2□□□□□ -1.74
LRRC28-203ENST00000447360 SNAPINO95295 136 aa4.2□□□□□ -1.74
LRRC28-203ENST00000447360 TSPAN13O95857 204 aa4.2□□□□□ -1.74
LRRC28-203ENST00000447360 KIAA1644Q3SXP7 199 aa4.2□□□□□ -1.74
LRRC28-203ENST00000447360 LINC00242Q5T6M2 205 aa4.2□□□□□ -1.74
LRRC28-203ENST00000447360 ZC2HC1BQ5TFG8 222 aa4.2□□□□□ -1.74
LRRC28-203ENST00000447360 C2orf48Q96LS8 159 aa4.2□□□□□ -1.74
LRRC28-203ENST00000447360 MAP1LC3AQ9H492 121 aa4.2□□□□□ -1.74
LRRC28-203ENST00000447360 IGIPA6NJ69 53 aa4.19□□□□□ -1.74
LRRC28-203ENST00000447360 IFITM10A6NMD0 228 aa4.19□□□□□ -1.74
LRRC28-203ENST00000447360 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.19□□□□□ -1.74
LRRC28-203ENST00000447360 IFI27P40305 119 aaPredicted RBP4.19□□□□□ -1.74
LRRC28-203ENST00000447360 KIAA0087Q14695 138 aa4.19□□□□□ -1.74
LRRC28-203ENST00000447360 C10orf25Q5T742 122 aa4.19□□□□□ -1.74
LRRC28-203ENST00000447360 LCE4AQ5TA78 99 aa4.19□□□□□ -1.74
LRRC28-203ENST00000447360 C2orf66Q6UXQ4 117 aa4.19□□□□□ -1.74
LRRC28-203ENST00000447360 LINC00173Q6ZV60 143 aa4.19□□□□□ -1.74
LRRC28-203ENST00000447360 CAMK2N2Q96S95 79 aa4.19□□□□□ -1.74
LRRC28-203ENST00000447360 AMELXQ99217 191 aa4.19□□□□□ -1.74
LRRC28-203ENST00000447360 K7EMI3 77 aa4.18□□□□□ -1.74
LRRC28-203ENST00000447360 LINC01547P58512 204 aaPredicted RBP4.18□□□□□ -1.74
LRRC28-203ENST00000447360 RPL18AQ02543 176 aaKnown RBP4.18□□□□□ -1.74
LRRC28-203ENST00000447360 SPAG11BQ08648 103 aa4.18□□□□□ -1.74
LRRC28-203ENST00000447360 TPRXLQ17RH7 258 aa4.18□□□□□ -1.74
LRRC28-203ENST00000447360 ORMDL2Q53FV1 153 aa4.18□□□□□ -1.74
LRRC28-203ENST00000447360 PAPPA-AS1Q5QFB9 102 aa4.18□□□□□ -1.74
LRRC28-203ENST00000447360 KRTAP11-1Q8IUC1 163 aa4.18□□□□□ -1.74
LRRC28-203ENST00000447360 OR10D4PQ8NGN7 298 aa4.18□□□□□ -1.74
LRRC28-203ENST00000447360 TMEM141Q96I45 108 aa4.18□□□□□ -1.74
LRRC28-203ENST00000447360 ALKBH7Q9BT30 221 aaPredicted RBP4.18□□□□□ -1.74
LRRC28-203ENST00000447360 GNB1LQ9BYB4 327 aa4.18□□□□□ -1.74
LRRC28-203ENST00000447360 CYSLTR1Q9Y271 337 aa4.18□□□□□ -1.74
LRRC28-203ENST00000447360 LINC01546A6NGU7 62 aa4.17□□□□□ -1.74
LRRC28-203ENST00000447360 COX19Q49B96 90 aa4.17□□□□□ -1.74
LRRC28-203ENST00000447360 UNQ6190/PRO20217Q6UXQ8 127 aa4.17□□□□□ -1.74
LRRC28-203ENST00000447360 TEX43Q6ZNM6 134 aa4.17□□□□□ -1.74
LRRC28-203ENST00000447360 FAM19A3Q7Z5A8 133 aa4.17□□□□□ -1.74
LRRC28-203ENST00000447360 ORAOV1Q8WV07 137 aa4.17□□□□□ -1.74
LRRC28-203ENST00000447360 NXT2Q9NPJ8 142 aaKnown RBP4.17□□□□□ -1.74
LRRC28-203ENST00000447360 MRPL35Q9NZE8 188 aaKnown RBP4.17□□□□□ -1.74
LRRC28-203ENST00000447360 C6orf48Q9UBA6 75 aa4.17□□□□□ -1.74
LRRC28-203ENST00000447360 LINC01561Q8N1V8 128 aa4.16□□□□□ -1.74
LRRC28-203ENST00000447360 TOMM6Q96B49 74 aa4.16□□□□□ -1.74
LRRC28-203ENST00000447360 VCX2Q9H322 139 aa4.16□□□□□ -1.74
LRRC28-203ENST00000447360 TGIF2-C20orf24A0A0A6YYL0 155 aa4.15□□□□□ -1.75
LRRC28-203ENST00000447360 APOC3P02656 99 aa4.15□□□□□ -1.75
LRRC28-203ENST00000447360 TLX1NBP0CAT3 122 aa4.15□□□□□ -1.75
LRRC28-203ENST00000447360 S100PP25815 95 aa4.15□□□□□ -1.75
LRRC28-203ENST00000447360 KRTAP7-1Q8IUC3 87 aa4.15□□□□□ -1.75
LRRC28-203ENST00000447360 URB1-AS1Q96HZ7 61 aa4.15□□□□□ -1.75
LRRC28-203ENST00000447360 TIMM17AQ99595 171 aa4.15□□□□□ -1.75
LRRC28-203ENST00000447360 RPS10P5Q9NQ39 176 aa4.15□□□□□ -1.75
LRRC28-203ENST00000447360 FAM168BA1KXE4 195 aa4.14□□□□□ -1.75
LRRC28-203ENST00000447360 NDUFA1O15239 70 aa4.14□□□□□ -1.75
LRRC28-203ENST00000447360 ZNF861PO60384 105 aa4.14□□□□□ -1.75
LRRC28-203ENST00000447360 G0S2P27469 103 aa4.14□□□□□ -1.75
LRRC28-203ENST00000447360 UBE2BP63146 152 aa4.14□□□□□ -1.75
LRRC28-203ENST00000447360 FABP9Q0Z7S8 132 aa4.14□□□□□ -1.75
LRRC28-203ENST00000447360 C2orf82Q6UX34 121 aa4.14□□□□□ -1.75
LRRC28-203ENST00000447360 Q6ZN92 141 aa4.14□□□□□ -1.75
LRRC28-203ENST00000447360 ERASQ7Z444 233 aa4.14□□□□□ -1.75
LRRC28-203ENST00000447360 TYMSOSQ8TAI1 123 aa4.14□□□□□ -1.75
LRRC28-203ENST00000447360 C2orf88Q9BSF0 95 aa4.14□□□□□ -1.75
LRRC28-203ENST00000447360 CDKN2A-AS1Q9UH64 79 aa4.14□□□□□ -1.75
LRRC28-203ENST00000447360 A0A087X002 238 aa4.13□□□□□ -1.75
LRRC28-203ENST00000447360 A0A096LNJ9 63 aa4.13□□□□□ -1.75
LRRC28-203ENST00000447360 CRYGAP11844 174 aa4.13□□□□□ -1.75
LRRC28-203ENST00000447360 LCE1DQ5T752 114 aa4.13□□□□□ -1.75
LRRC28-203ENST00000447360 FAM19A5Q7Z5A7 132 aaPredicted RBP4.13□□□□□ -1.75
LRRC28-203ENST00000447360 SLC7A5P1Q8MH63 180 aa4.13□□□□□ -1.75
LRRC28-203ENST00000447360 SCGB3A1Q96QR1 104 aa4.13□□□□□ -1.75
LRRC28-203ENST00000447360 IGLV7-46A0A075B6I9 117 aa4.12□□□□□ -1.75
LRRC28-203ENST00000447360 TRBV30A0A0K0K1B3 111 aa4.12□□□□□ -1.75
LRRC28-203ENST00000447360 A0A0U1RRA0 63 aa4.12□□□□□ -1.75
LRRC28-203ENST00000447360 KRTAP9-7A8MTY7 169 aa4.12□□□□□ -1.75
LRRC28-203ENST00000447360 M0QXV9 152 aa4.12□□□□□ -1.75
LRRC28-203ENST00000447360 HERVK_113P63121 156 aa4.12□□□□□ -1.75
LRRC28-203ENST00000447360 CTAG1AP78358 180 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms