RNA–Protein interactions for RNA: ENST00000446646.1

HDAC9-216, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-216ENST00000446646 TMEM243Q9BU79 118 aa4.55□□□□□ -1.68
HDAC9-216ENST00000446646 ST20Q9HBF5 79 aa4.55□□□□□ -1.68
HDAC9-216ENST00000446646 TRAV26-2A0A0B4J265 109 aa4.54□□□□□ -1.68
HDAC9-216ENST00000446646 TRBV6-5A0A0K0K1A5 114 aa4.54□□□□□ -1.68
HDAC9-216ENST00000446646 FAM236DA0A1B0GTK5 79 aa4.54□□□□□ -1.68
HDAC9-216ENST00000446646 SDHAF1A6NFY7 115 aa4.54□□□□□ -1.68
HDAC9-216ENST00000446646 I3L3M4 83 aa4.54□□□□□ -1.68
HDAC9-216ENST00000446646 FAM236CP0DP71 79 aa4.54□□□□□ -1.68
HDAC9-216ENST00000446646 CKS2P33552 79 aa4.54□□□□□ -1.68
HDAC9-216ENST00000446646 IQCJQ1A5X6 159 aa4.54□□□□□ -1.68
HDAC9-216ENST00000446646 FAM104BQ5XKR9 115 aa4.54□□□□□ -1.68
HDAC9-216ENST00000446646 AMN1Q8IY45 258 aa4.54□□□□□ -1.68
HDAC9-216ENST00000446646 PRO1933Q9H354 126 aa4.54□□□□□ -1.68
HDAC9-216ENST00000446646 IBA57-AS1B1ANH7 110 aa4.53□□□□□ -1.68
HDAC9-216ENST00000446646 H7C423 109 aa4.53□□□□□ -1.68
HDAC9-216ENST00000446646 ANGP03950 147 aaKnown RBP4.53□□□□□ -1.68
HDAC9-216ENST00000446646 ADCYAP1P18509 176 aa4.53□□□□□ -1.68
HDAC9-216ENST00000446646 FCER1GP30273 86 aa4.53□□□□□ -1.68
HDAC9-216ENST00000446646 AMMECR1LQ6DCA0 310 aa4.53□□□□□ -1.68
HDAC9-216ENST00000446646 Q6ZVH6 145 aa4.53□□□□□ -1.68
HDAC9-216ENST00000446646 CBLN2Q8IUK8 224 aa4.53□□□□□ -1.68
HDAC9-216ENST00000446646 ORMDL3Q8N138 153 aa4.53□□□□□ -1.68
HDAC9-216ENST00000446646 TMEM101Q96IK0 257 aa4.53□□□□□ -1.68
HDAC9-216ENST00000446646 RPS10P5Q9NQ39 176 aa4.53□□□□□ -1.68
HDAC9-216ENST00000446646 TMEM242Q9NWH2 141 aa4.53□□□□□ -1.68
HDAC9-216ENST00000446646 PAM16Q9Y3D7 125 aa4.53□□□□□ -1.68
HDAC9-216ENST00000446646 TRAV8-4A0A0B4J246 113 aa4.52□□□□□ -1.69
HDAC9-216ENST00000446646 A0A1B0GXF2 115 aa4.52□□□□□ -1.69
HDAC9-216ENST00000446646 HLA-DQA1P01909 254 aa4.52□□□□□ -1.69
HDAC9-216ENST00000446646 APOC3P02656 99 aa4.52□□□□□ -1.69
HDAC9-216ENST00000446646 HSD52Q0P140 79 aa4.52□□□□□ -1.69
HDAC9-216ENST00000446646 Q6ZRU5 148 aa4.52□□□□□ -1.69
HDAC9-216ENST00000446646 RPL39LQ96EH5 51 aaKnown RBP4.52□□□□□ -1.69
HDAC9-216ENST00000446646 RNF185Q96GF1 192 aa4.52□□□□□ -1.69
HDAC9-216ENST00000446646 C20orf78Q9BR46 151 aa4.52□□□□□ -1.69
HDAC9-216ENST00000446646 IGKV2D-24A0A075B6R9 120 aa4.51□□□□□ -1.69
HDAC9-216ENST00000446646 TRBV27A0A0K0K1C4 114 aa4.51□□□□□ -1.69
HDAC9-216ENST00000446646 C7orf77A4D0Y5 90 aa4.51□□□□□ -1.69
HDAC9-216ENST00000446646 D6R8Y8 96 aa4.51□□□□□ -1.69
HDAC9-216ENST00000446646 PANO1I0J062 215 aa4.51□□□□□ -1.69
HDAC9-216ENST00000446646 MT-ND6P03923 174 aa4.51□□□□□ -1.69
HDAC9-216ENST00000446646 MIAQ16674 131 aa4.51□□□□□ -1.69
HDAC9-216ENST00000446646 MRPL51Q4U2R6 128 aaKnown RBP4.51□□□□□ -1.69
HDAC9-216ENST00000446646 MPV17L2Q567V2 206 aa4.51□□□□□ -1.69
HDAC9-216ENST00000446646 C10orf91Q5T1B1 145 aa4.51□□□□□ -1.69
HDAC9-216ENST00000446646 UBE2WQ96B02 151 aa4.51□□□□□ -1.69
HDAC9-216ENST00000446646 LAMTOR3Q9UHA4 124 aa4.51□□□□□ -1.69
HDAC9-216ENST00000446646 KLK12Q9UKR0 248 aa4.51□□□□□ -1.69
HDAC9-216ENST00000446646 A0A1B0GUV1 79 aa4.5□□□□□ -1.69
HDAC9-216ENST00000446646 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.5□□□□□ -1.69
HDAC9-216ENST00000446646 SEC61BP60468 96 aaKnown RBP4.5□□□□□ -1.69
HDAC9-216ENST00000446646 JOSD1Q15040 202 aaPredicted RBP4.5□□□□□ -1.69
HDAC9-216ENST00000446646 C14orf177Q52M58 125 aa4.5□□□□□ -1.69
HDAC9-216ENST00000446646 NTM-AS1Q6ZSK4 140 aa4.5□□□□□ -1.69
HDAC9-216ENST00000446646 PRELID3AQ96N28 172 aa4.5□□□□□ -1.69
HDAC9-216ENST00000446646 SMIM2Q9BVW6 85 aa4.5□□□□□ -1.69
HDAC9-216ENST00000446646 SPANXDQ9BXN6 97 aa4.5□□□□□ -1.69
HDAC9-216ENST00000446646 CYSLTR1Q9Y271 337 aa4.5□□□□□ -1.69
HDAC9-216ENST00000446646 TRBV24-1A0A075B6N3 115 aa4.49□□□□□ -1.69
HDAC9-216ENST00000446646 RPS10P46783 165 aaKnown RBP4.49□□□□□ -1.69
HDAC9-216ENST00000446646 KRTAP10-8P60410 259 aa4.49□□□□□ -1.69
HDAC9-216ENST00000446646 REG3AQ06141 175 aa4.49□□□□□ -1.69
HDAC9-216ENST00000446646 SCGB1D4Q6XE38 83 aa4.49□□□□□ -1.69
HDAC9-216ENST00000446646 TMEM136Q6ZRR5 245 aa4.49□□□□□ -1.69
HDAC9-216ENST00000446646 Q6ZVQ6 151 aa4.49□□□□□ -1.69
HDAC9-216ENST00000446646 GNB1LQ9BYB4 327 aa4.49□□□□□ -1.69
HDAC9-216ENST00000446646 A0A087WZ39 114 aa4.48□□□□□ -1.69
HDAC9-216ENST00000446646 K7EMI3 77 aa4.48□□□□□ -1.69
HDAC9-216ENST00000446646 DPM2O94777 84 aa4.48□□□□□ -1.69
HDAC9-216ENST00000446646 TSHBP01222 138 aa4.48□□□□□ -1.69
HDAC9-216ENST00000446646 FGF6P10767 208 aa4.48□□□□□ -1.69
HDAC9-216ENST00000446646 POLR2KP53803 58 aaKnown RBP4.48□□□□□ -1.69
HDAC9-216ENST00000446646 NDUFA6P56556 154 aa4.48□□□□□ -1.69
HDAC9-216ENST00000446646 LINC00269Q8N2A0 174 aa4.48□□□□□ -1.69
HDAC9-216ENST00000446646 ZNF664Q8N3J9 261 aa4.48□□□□□ -1.69
HDAC9-216ENST00000446646 NRACQ8N912 160 aa4.48□□□□□ -1.69
HDAC9-216ENST00000446646 Q8N976 141 aa4.48□□□□□ -1.69
HDAC9-216ENST00000446646 LINC01600Q96MT4 127 aa4.48□□□□□ -1.69
HDAC9-216ENST00000446646 NXT2Q9NPJ8 142 aaKnown RBP4.48□□□□□ -1.69
HDAC9-216ENST00000446646 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.47□□□□□ -1.69
HDAC9-216ENST00000446646 A0A1B0GWB2 263 aa4.47□□□□□ -1.69
HDAC9-216ENST00000446646 IGKV2-29A2NJV5 120 aaPredicted RBP4.47□□□□□ -1.69
HDAC9-216ENST00000446646 LINC01549A6NIU2 74 aa4.47□□□□□ -1.69
HDAC9-216ENST00000446646 NPYP01303 97 aa4.47□□□□□ -1.69
HDAC9-216ENST00000446646 PFN2P35080 140 aa4.47□□□□□ -1.69
HDAC9-216ENST00000446646 IFI27P40305 119 aaPredicted RBP4.47□□□□□ -1.69
HDAC9-216ENST00000446646 ORMDL2Q53FV1 153 aa4.47□□□□□ -1.69
HDAC9-216ENST00000446646 LYRM7Q5U5X0 104 aa4.47□□□□□ -1.69
HDAC9-216ENST00000446646 CLPSL2Q6UWE3 100 aa4.47□□□□□ -1.69
HDAC9-216ENST00000446646 OR10D4PQ8NGN7 298 aa4.47□□□□□ -1.69
HDAC9-216ENST00000446646 PRSS3P2Q8NHM4 247 aa4.47□□□□□ -1.69
HDAC9-216ENST00000446646 MIEN1Q9BRT3 115 aa4.47□□□□□ -1.69
HDAC9-216ENST00000446646 SMCO4Q9NRQ5 59 aa4.47□□□□□ -1.69
HDAC9-216ENST00000446646 PRR34Q9NV39 138 aa4.47□□□□□ -1.69
HDAC9-216ENST00000446646 IGKV3OR2-268A0A0C4DH90 116 aa4.46□□□□□ -1.7
HDAC9-216ENST00000446646 SS18Q15532 418 aa4.46□□□□□ -1.7
HDAC9-216ENST00000446646 PAPPA-AS1Q5QFB9 102 aa4.46□□□□□ -1.7
HDAC9-216ENST00000446646 Q6ZN92 141 aa4.46□□□□□ -1.7
HDAC9-216ENST00000446646 ANKRD29Q8N6D5 301 aa4.46□□□□□ -1.7
HDAC9-216ENST00000446646 C20orf203Q8NBC4 194 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms