RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 GAGE6Q13070 117 aa1.93□□□□□ -2.1
LINC00393-201ENST00000443621 CEMP1Q6PRD7 247 aaPredicted RBP1.93□□□□□ -2.1
LINC00393-201ENST00000443621 Q6ZTC4 211 aa1.93□□□□□ -2.1
LINC00393-201ENST00000443621 NBEAL2Q6ZNJ1 2754 aa1.93□□□□□ -2.1
LINC00393-201ENST00000443621 NOTCH3Q9UM47 2321 aa1.92□□□□□ -2.1
LINC00393-201ENST00000443621 TRBV10-2A0A0K0K1G8 114 aa1.92□□□□□ -2.1
LINC00393-201ENST00000443621 A0A1B0GV90 55 aa1.92□□□□□ -2.1
LINC00393-201ENST00000443621 NUPR2A6NF83 97 aa1.92□□□□□ -2.1
LINC00393-201ENST00000443621 CYSRT1A8MQ03 144 aa1.92□□□□□ -2.1
LINC00393-201ENST00000443621 IGLL5B9A064 214 aa1.92□□□□□ -2.1
LINC00393-201ENST00000443621 H0YGX0 51 aa1.92□□□□□ -2.1
LINC00393-201ENST00000443621 K7EP34 96 aa1.92□□□□□ -2.1
LINC00393-201ENST00000443621 IGHV3-33P01772 117 aa1.92□□□□□ -2.1
LINC00393-201ENST00000443621 CRPP02741 224 aa1.92□□□□□ -2.1
LINC00393-201ENST00000443621 ANGP03950 147 aaKnown RBP1.92□□□□□ -2.1
LINC00393-201ENST00000443621 SPINK8P0C7L1 97 aa1.92□□□□□ -2.1
LINC00393-201ENST00000443621 TLX1NBP0CAT3 122 aa1.92□□□□□ -2.1
LINC00393-201ENST00000443621 CFC1BP0CG36 223 aa1.92□□□□□ -2.1
LINC00393-201ENST00000443621 CFC1P0CG37 223 aa1.92□□□□□ -2.1
LINC00393-201ENST00000443621 CKS1BP61024 79 aa1.92□□□□□ -2.1
LINC00393-201ENST00000443621 FOXI1Q12951 378 aa1.92□□□□□ -2.1
LINC00393-201ENST00000443621 KIAA0087Q14695 138 aa1.92□□□□□ -2.1
LINC00393-201ENST00000443621 BATFQ16520 125 aa1.92□□□□□ -2.1
LINC00393-201ENST00000443621 ESRGQ1W209 222 aa1.92□□□□□ -2.1
LINC00393-201ENST00000443621 LINC00528Q8N1L1 170 aa1.92□□□□□ -2.1
LINC00393-201ENST00000443621 LINC00269Q8N2A0 174 aa1.92□□□□□ -2.1
LINC00393-201ENST00000443621 MTURNQ8N3F0 131 aa1.92□□□□□ -2.1
LINC00393-201ENST00000443621 CHCHD10Q8WYQ3 142 aaPredicted RBP1.92□□□□□ -2.1
LINC00393-201ENST00000443621 CARD19Q96LW7 228 aa1.92□□□□□ -2.1
LINC00393-201ENST00000443621 Q9H8V8 135 aa1.92□□□□□ -2.1
LINC00393-201ENST00000443621 NHP2Q9NX24 153 aaKnown RBP1.92□□□□□ -2.1
LINC00393-201ENST00000443621 ERG28Q9UKR5 140 aa1.92□□□□□ -2.1
LINC00393-201ENST00000443621 NBEAL1Q6ZS30 2694 aa1.92□□□□□ -2.1
LINC00393-201ENST00000443621 TRBV7-6A0A0J9YX20 115 aa1.91□□□□□ -2.1
LINC00393-201ENST00000443621 J3QL48 77 aa1.91□□□□□ -2.1
LINC00393-201ENST00000443621 J3QR89 54 aa1.91□□□□□ -2.1
LINC00393-201ENST00000443621 SNCGO76070 127 aa1.91□□□□□ -2.1
LINC00393-201ENST00000443621 RPL28P46779 137 aaKnown RBP1.91□□□□□ -2.1
LINC00393-201ENST00000443621 C14orf177Q52M58 125 aa1.91□□□□□ -2.1
LINC00393-201ENST00000443621 TTC32Q5I0X7 151 aa1.91□□□□□ -2.1
LINC00393-201ENST00000443621 DEFB121Q5J5C9 76 aa1.91□□□□□ -2.1
LINC00393-201ENST00000443621 KRTAP26-1Q6PEX3 210 aa1.91□□□□□ -2.1
LINC00393-201ENST00000443621 ENHOQ6UWT2 76 aa1.91□□□□□ -2.1
LINC00393-201ENST00000443621 MUSTN1Q8IVN3 82 aa1.91□□□□□ -2.1
LINC00393-201ENST00000443621 LINC00308Q8TCZ7 52 aa1.91□□□□□ -2.1
LINC00393-201ENST00000443621 NTN5Q8WTR8 489 aaPredicted RBP1.91□□□□□ -2.1
LINC00393-201ENST00000443621 RAB37Q96AX2 223 aa1.91□□□□□ -2.1
LINC00393-201ENST00000443621 MDFIQ99750 246 aa1.91□□□□□ -2.1
LINC00393-201ENST00000443621 TTTY13Q9BZ97 58 aa1.91□□□□□ -2.1
LINC00393-201ENST00000443621 TMEM126AQ9H061 195 aa1.91□□□□□ -2.1
LINC00393-201ENST00000443621 PLA2G2DQ9UNK4 145 aa1.91□□□□□ -2.1
LINC00393-201ENST00000443621 SPCS1Q9Y6A9 102 aa1.91□□□□□ -2.1
LINC00393-201ENST00000443621 H3BMG7 143 aa1.9□□□□□ -2.11
LINC00393-201ENST00000443621 H3BT86 120 aa1.9□□□□□ -2.11
LINC00393-201ENST00000443621 H3BUT2 72 aa1.9□□□□□ -2.11
LINC00393-201ENST00000443621 K7ERU9 68 aa1.9□□□□□ -2.11
LINC00393-201ENST00000443621 DEFB4AO15263 64 aa1.9□□□□□ -2.11
LINC00393-201ENST00000443621 TRACP01848 142 aa1.9□□□□□ -2.11
LINC00393-201ENST00000443621 XCL1P47992 114 aa1.9□□□□□ -2.11
LINC00393-201ENST00000443621 NANOS2P60321 138 aaKnown RBP1.9□□□□□ -2.11
LINC00393-201ENST00000443621 RNASE13Q5GAN3 156 aaKnown RBP1.9□□□□□ -2.11
LINC00393-201ENST00000443621 ADAMTSL4-AS1Q5T5F5 129 aa1.9□□□□□ -2.11
LINC00393-201ENST00000443621 C5orf38Q86SI9 138 aa1.9□□□□□ -2.11
LINC00393-201ENST00000443621 SND1-IT1Q9HBX3 110 aa1.9□□□□□ -2.11
LINC00393-201ENST00000443621 KLK12Q9UKR0 248 aa1.9□□□□□ -2.11
LINC00393-201ENST00000443621 APLNQ9ULZ1 77 aa1.9□□□□□ -2.11
LINC00393-201ENST00000443621 COL7A1Q02388 2944 aa1.89□□□□□ -2.11
LINC00393-201ENST00000443621 GAGE12HA6NDE8 117 aa1.89□□□□□ -2.11
LINC00393-201ENST00000443621 NDUFC2-KCTD14E9PQ53 114 aa1.89□□□□□ -2.11
LINC00393-201ENST00000443621 LST1O00453 97 aa1.89□□□□□ -2.11
LINC00393-201ENST00000443621 TSPAN13O95857 204 aa1.89□□□□□ -2.11
LINC00393-201ENST00000443621 SCGB1A1P11684 91 aa1.89□□□□□ -2.11
LINC00393-201ENST00000443621 HTN3P15516 51 aa1.89□□□□□ -2.11
LINC00393-201ENST00000443621 LINC00158P58513 81 aa1.89□□□□□ -2.11
LINC00393-201ENST00000443621 CNBPP62633 177 aaKnown RBP1.89□□□□□ -2.11
LINC00393-201ENST00000443621 SPAG11BQ08648 103 aa1.89□□□□□ -2.11
LINC00393-201ENST00000443621 ATXN8Q156A1 80 aa1.89□□□□□ -2.11
LINC00393-201ENST00000443621 OCIAD2Q56VL3 154 aa1.89□□□□□ -2.11
LINC00393-201ENST00000443621 WFDC10BQ8IUB3 73 aa1.89□□□□□ -2.11
LINC00393-201ENST00000443621 MIR7-3HGQ8N6C7 128 aa1.89□□□□□ -2.11
LINC00393-201ENST00000443621 DEFB104AQ8WTQ1 72 aa1.89□□□□□ -2.11
LINC00393-201ENST00000443621 UBE2WQ96B02 151 aa1.89□□□□□ -2.11
LINC00393-201ENST00000443621 FAM30AQ9NZY2 134 aa1.89□□□□□ -2.11
LINC00393-201ENST00000443621 LINC00588Q9Y4M8 146 aa1.89□□□□□ -2.11
LINC00393-201ENST00000443621 V9GYY9 64 aa1.89□□□□□ -2.11
LINC00393-201ENST00000443621 DYNC2H1Q8NCM8 4307 aaKnown RBP1.88□□□□□ -2.11
LINC00393-201ENST00000443621 IGLV5-37A0A075B6J1 123 aa1.88□□□□□ -2.11
LINC00393-201ENST00000443621 A0A1B0GW54 56 aa1.88□□□□□ -2.11
LINC00393-201ENST00000443621 INAFM2P0DMQ5 153 aa1.88□□□□□ -2.11
LINC00393-201ENST00000443621 SCGB1C2P0DMR2 95 aa1.88□□□□□ -2.11
LINC00393-201ENST00000443621 RPL13AP40429 203 aaKnown RBP1.88□□□□□ -2.11
LINC00393-201ENST00000443621 PSMB2P49721 201 aa1.88□□□□□ -2.11
LINC00393-201ENST00000443621 LINC01620Q4KN68 170 aa1.88□□□□□ -2.11
LINC00393-201ENST00000443621 C2orf82Q6UX34 121 aa1.88□□□□□ -2.11
LINC00393-201ENST00000443621 SOSTDC1Q6X4U4 206 aa1.88□□□□□ -2.11
LINC00393-201ENST00000443621 TEN1Q86WV5 123 aa1.88□□□□□ -2.11
LINC00393-201ENST00000443621 PPDPFLQ8WWR9 84 aa1.88□□□□□ -2.11
LINC00393-201ENST00000443621 RETNQ9HD89 108 aa1.88□□□□□ -2.11
LINC00393-201ENST00000443621 TOMM7Q9P0U1 55 aa1.88□□□□□ -2.11
LINC00393-201ENST00000443621 LINC00474Q9P2X8 69 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms