RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 USP17L23D6RBM5 183 aa8.45□□□□□ -1.06
LTBR-203ENST00000441074 IGKV2D-28P01615 120 aa8.45□□□□□ -1.06
LTBR-203ENST00000441074 LINC01561Q8N1V8 128 aa8.45□□□□□ -1.06
LTBR-203ENST00000441074 C11orf72Q8NBR9 251 aa8.45□□□□□ -1.06
LTBR-203ENST00000441074 RBMY1BA6NDE4 496 aaKnown RBP8.44□□□□□ -1.06
LTBR-203ENST00000441074 RBMY1EA6NEQ0 496 aaKnown RBP8.44□□□□□ -1.06
LTBR-203ENST00000441074 RBMY1DP0C7P1 496 aaKnown RBP8.44□□□□□ -1.06
LTBR-203ENST00000441074 SMIM11BQ8TCY0 68 aa8.44□□□□□ -1.06
LTBR-203ENST00000441074 A0A087WVE0 104 aa8.43□□□□□ -1.06
LTBR-203ENST00000441074 INSP01308 110 aa8.43□□□□□ -1.06
LTBR-203ENST00000441074 SND1-IT1Q9HBX3 110 aa8.43□□□□□ -1.06
LTBR-203ENST00000441074 MIR7-3HGQ8N6C7 128 aa8.42□□□□□ -1.06
LTBR-203ENST00000441074 CDC42SE2Q9NRR3 84 aa8.42□□□□□ -1.06
LTBR-203ENST00000441074 TRAV25A0A0B4J276 109 aa8.42□□□□□ -1.06
LTBR-203ENST00000441074 OXTP01178 125 aa8.42□□□□□ -1.06
LTBR-203ENST00000441074 DSCR8Q96T75 97 aa8.42□□□□□ -1.06
LTBR-203ENST00000441074 C2CD3Q4AC94 2353 aa8.41□□□□□ -1.06
LTBR-203ENST00000441074 LINC01006Q8NI28 216 aa8.41□□□□□ -1.06
LTBR-203ENST00000441074 ATRQ13535 2644 aa8.41□□□□□ -1.06
LTBR-203ENST00000441074 TRRAPQ9Y4A5 3859 aa8.41□□□□□ -1.06
LTBR-203ENST00000441074 MAP6D1Q9H9H5 199 aa8.41□□□□□ -1.06
LTBR-203ENST00000441074 NTM-AS1Q6ZSK4 140 aa8.4□□□□□ -1.06
LTBR-203ENST00000441074 COX7B2Q8TF08 81 aa8.4□□□□□ -1.07
LTBR-203ENST00000441074 DYNLRB2Q8TF09 96 aa8.4□□□□□ -1.07
LTBR-203ENST00000441074 C4orf3Q8WVX3 66 aa8.4□□□□□ -1.07
LTBR-203ENST00000441074 NCR3O14931 201 aa8.39□□□□□ -1.07
LTBR-203ENST00000441074 LECT2O14960 151 aa8.39□□□□□ -1.07
LTBR-203ENST00000441074 RPL36AP83881 106 aaKnown RBP8.39□□□□□ -1.07
LTBR-203ENST00000441074 TMEM86BQ8N661 226 aa8.39□□□□□ -1.07
LTBR-203ENST00000441074 RPL36ALQ969Q0 106 aaKnown RBP8.39□□□□□ -1.07
LTBR-203ENST00000441074 NDUFC2-KCTD14E9PQ53 114 aa8.38□□□□□ -1.07
LTBR-203ENST00000441074 CCKP06307 115 aa8.38□□□□□ -1.07
LTBR-203ENST00000441074 HILS1P60008 231 aa8.38□□□□□ -1.07
LTBR-203ENST00000441074 TRBV10-1A0A0K0K1A3 114 aa8.38□□□□□ -1.07
LTBR-203ENST00000441074 CCL18P55774 89 aa8.38□□□□□ -1.07
LTBR-203ENST00000441074 S100A7L2Q5SY68 101 aa8.38□□□□□ -1.07
LTBR-203ENST00000441074 Q5XG85 94 aa8.38□□□□□ -1.07
LTBR-203ENST00000441074 LINC00158P58513 81 aa8.37□□□□□ -1.07
LTBR-203ENST00000441074 C4orf26Q17RF5 130 aa8.37□□□□□ -1.07
LTBR-203ENST00000441074 NOTCH3Q9UM47 2321 aa8.37□□□□□ -1.07
LTBR-203ENST00000441074 NDUFC2O95298 119 aa8.37□□□□□ -1.07
LTBR-203ENST00000441074 RNASE1P07998 156 aaKnown RBP8.37□□□□□ -1.07
LTBR-203ENST00000441074 ATP5EP2Q5VTU8 51 aa8.37□□□□□ -1.07
LTBR-203ENST00000441074 K7EQD1 137 aa8.36□□□□□ -1.07
LTBR-203ENST00000441074 IL17DQ8TAD2 202 aa8.36□□□□□ -1.07
LTBR-203ENST00000441074 ORMDL1Q9P0S3 153 aa8.36□□□□□ -1.07
LTBR-203ENST00000441074 FHL2Q14192 279 aa8.36□□□□□ -1.07
LTBR-203ENST00000441074 DEFB114Q30KQ6 69 aa8.36□□□□□ -1.07
LTBR-203ENST00000441074 FBN1P35555 2871 aaKnown RBP8.36□□□□□ -1.07
LTBR-203ENST00000441074 IBA57-AS1B1ANH7 110 aa8.35□□□□□ -1.07
LTBR-203ENST00000441074 SLPIP03973 132 aa8.35□□□□□ -1.07
LTBR-203ENST00000441074 SS18Q15532 418 aa8.35□□□□□ -1.07
LTBR-203ENST00000441074 TOMM7Q9P0U1 55 aa8.35□□□□□ -1.07
LTBR-203ENST00000441074 UBE2L6O14933 153 aa8.34□□□□□ -1.07
LTBR-203ENST00000441074 GHRHP01286 108 aa8.34□□□□□ -1.07
LTBR-203ENST00000441074 KRTAP10-3P60369 221 aa8.34□□□□□ -1.07
LTBR-203ENST00000441074 TMEM243Q9BU79 118 aa8.34□□□□□ -1.07
LTBR-203ENST00000441074 TRGV1A0A0A0MS02 117 aa8.34□□□□□ -1.08
LTBR-203ENST00000441074 LYPD5Q6UWN5 251 aa8.34□□□□□ -1.08
LTBR-203ENST00000441074 HRCT1Q6UXD1 115 aa8.34□□□□□ -1.08
LTBR-203ENST00000441074 JMJD7-PLA2G4BH0Y9G9 81 aa8.33□□□□□ -1.08
LTBR-203ENST00000441074 CCL24O00175 119 aa8.33□□□□□ -1.08
LTBR-203ENST00000441074 LINC00167Q96N53 147 aa8.33□□□□□ -1.08
LTBR-203ENST00000441074 TRBV6-4A0A1B0GX49 114 aa8.32□□□□□ -1.08
LTBR-203ENST00000441074 PAX4O43316 350 aa8.32□□□□□ -1.08
LTBR-203ENST00000441074 STHQ8IWL8 128 aa8.32□□□□□ -1.08
LTBR-203ENST00000441074 TRBV10-3A0A0K0K1G6 114 aa8.32□□□□□ -1.08
LTBR-203ENST00000441074 COL6A5A8TX70 2615 aa8.32□□□□□ -1.08
LTBR-203ENST00000441074 XCL2Q9UBD3 114 aa8.31□□□□□ -1.08
LTBR-203ENST00000441074 TRAV23DV6A0A075B6W5 121 aa8.31□□□□□ -1.08
LTBR-203ENST00000441074 ODF3L2Q3SX64 289 aa8.31□□□□□ -1.08
LTBR-203ENST00000441074 C1orf158Q8N1D5 194 aa8.31□□□□□ -1.08
LTBR-203ENST00000441074 IGHV3OR16-9A0A0B4J2B5 98 aa8.3□□□□□ -1.08
LTBR-203ENST00000441074 PFN2P35080 140 aa8.3□□□□□ -1.08
LTBR-203ENST00000441074 FAM19A1Q7Z5A9 133 aa8.3□□□□□ -1.08
LTBR-203ENST00000441074 SPATA3Q8NHX4 192 aa8.3□□□□□ -1.08
LTBR-203ENST00000441074 C16orf95Q9H693 158 aa8.3□□□□□ -1.08
LTBR-203ENST00000441074 ENHOQ6UWT2 76 aa8.29□□□□□ -1.08
LTBR-203ENST00000441074 WFDC9Q8NEX5 89 aa8.29□□□□□ -1.08
LTBR-203ENST00000441074 NBEAL2Q6ZNJ1 2754 aa8.29□□□□□ -1.08
LTBR-203ENST00000441074 EPM2AB3EWF7 344 aa8.29□□□□□ -1.08
LTBR-203ENST00000441074 TMEM256-PLSCR3K7ERE1 68 aa8.29□□□□□ -1.08
LTBR-203ENST00000441074 BCE1O60756 84 aa8.29□□□□□ -1.08
LTBR-203ENST00000441074 KRTAP24-1Q3LI83 254 aa8.29□□□□□ -1.08
LTBR-203ENST00000441074 Q6ZTI0 123 aa8.29□□□□□ -1.08
LTBR-203ENST00000441074 MRAPQ8TCY5 172 aa8.29□□□□□ -1.08
LTBR-203ENST00000441074 A0A087WZ39 114 aa8.28□□□□□ -1.08
LTBR-203ENST00000441074 FAM236DA0A1B0GTK5 79 aa8.28□□□□□ -1.08
LTBR-203ENST00000441074 FAM236CP0DP71 79 aa8.28□□□□□ -1.08
LTBR-203ENST00000441074 XCL1P47992 114 aa8.28□□□□□ -1.08
LTBR-203ENST00000441074 C20orf197Q8N268 126 aa8.28□□□□□ -1.08
LTBR-203ENST00000441074 Q8N814 137 aa8.28□□□□□ -1.08
LTBR-203ENST00000441074 UBL5Q9BZL1 73 aa8.28□□□□□ -1.08
LTBR-203ENST00000441074 CMC4P56277 68 aaPredicted RBP8.27□□□□□ -1.09
LTBR-203ENST00000441074 WFDC10AQ9H1F0 79 aa8.27□□□□□ -1.09
LTBR-203ENST00000441074 IGKV3OR2-268A0A0C4DH90 116 aa8.26□□□□□ -1.09
LTBR-203ENST00000441074 SERP1Q9Y6X1 66 aa8.26□□□□□ -1.09
LTBR-203ENST00000441074 STAB1Q9NY15 2570 aa8.26□□□□□ -1.09
LTBR-203ENST00000441074 C16orf74Q96GX8 76 aa8.25□□□□□ -1.09
LTBR-203ENST00000441074 IGLV4-60A0A075B6I1 120 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms