RNA–Protein interactions for RNA: ENST00000440860.1

LINC00354-202, long intergenic non-protein coding RNA 354, humanhuman

TSL 2 BASIC

Gene LINC00354, Length 376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00354-202ENST00000440860 NUP188Q5SRE5 1749 aa-0.78□□□□□ -2.53
LINC00354-202ENST00000440860 CCDC141Q6ZP82 1450 aa-0.78□□□□□ -2.53
LINC00354-202ENST00000440860 OOSP1A8MZH6 123 aa-0.78□□□□□ -2.53
LINC00354-202ENST00000440860 ATP5EP56381 51 aaPredicted RBP-0.78□□□□□ -2.53
LINC00354-202ENST00000440860 SPRR4Q96PI1 79 aa-0.78□□□□□ -2.53
LINC00354-202ENST00000440860 C12orf57Q99622 126 aa-0.78□□□□□ -2.53
LINC00354-202ENST00000440860 CDC42SE2Q9NRR3 84 aa-0.78□□□□□ -2.53
LINC00354-202ENST00000440860 A0A0G2JMZ2 1700 aa-0.78□□□□□ -2.53
LINC00354-202ENST00000440860 TET3O43151 1660 aa-0.78□□□□□ -2.53
LINC00354-202ENST00000440860 TOP2BQ02880 1626 aa-0.78□□□□□ -2.54
LINC00354-202ENST00000440860 BIRC6Q9NR09 4857 aa-0.78□□□□□ -2.54
LINC00354-202ENST00000440860 EHBP1L1Q8N3D4 1523 aa-0.79□□□□□ -2.54
LINC00354-202ENST00000440860 PDCD11Q14690 1871 aaKnown RBP-0.79□□□□□ -2.54
LINC00354-202ENST00000440860 NBPF19A0A087WUL8 3843 aa-0.79□□□□□ -2.54
LINC00354-202ENST00000440860 COX6CP09669 75 aa-0.79□□□□□ -2.54
LINC00354-202ENST00000440860 SPRR2EP22531 72 aa-0.79□□□□□ -2.54
LINC00354-202ENST00000440860 SPRR2AP35326 72 aa-0.79□□□□□ -2.54
LINC00354-202ENST00000440860 KRTAP6-2Q3LI66 62 aa-0.79□□□□□ -2.54
LINC00354-202ENST00000440860 XRN1Q8IZH2 1706 aaKnown RBP-0.79□□□□□ -2.54
LINC00354-202ENST00000440860 CUL7Q14999 1698 aa-0.79□□□□□ -2.54
LINC00354-202ENST00000440860 SONP18583 2426 aaKnown RBP-0.79□□□□□ -2.54
LINC00354-202ENST00000440860 C1orf167Q5SNV9 1468 aa-0.8□□□□□ -2.54
LINC00354-202ENST00000440860 FASNP49327 2511 aaKnown RBP-0.8□□□□□ -2.54
LINC00354-202ENST00000440860 LOC100130705A0A1B0GUX0 176 aa-0.8□□□□□ -2.54
LINC00354-202ENST00000440860 NDUFA2O43678 99 aa-0.8□□□□□ -2.54
LINC00354-202ENST00000440860 Q0VG73 95 aa-0.8□□□□□ -2.54
LINC00354-202ENST00000440860 LCN9Q8WX39 176 aa-0.8□□□□□ -2.54
LINC00354-202ENST00000440860 NAP1L6A6NFF2 107 aa-0.81□□□□□ -2.54
LINC00354-202ENST00000440860 FAM223BA6NKX1 122 aa-0.81□□□□□ -2.54
LINC00354-202ENST00000440860 SVBPQ8N300 66 aa-0.81□□□□□ -2.54
LINC00354-202ENST00000440860 PP6455Q8WZ26 134 aa-0.81□□□□□ -2.54
LINC00354-202ENST00000440860 MYO18BQ8IUG5 2567 aa-0.81□□□□□ -2.54
LINC00354-202ENST00000440860 C1orf54Q8WWF1 131 aa-0.82□□□□□ -2.54
LINC00354-202ENST00000440860 CRIPTQ9P021 101 aa-0.82□□□□□ -2.54
LINC00354-202ENST00000440860 PRO1854Q9UHT4 67 aa-0.82□□□□□ -2.54
LINC00354-202ENST00000440860 NLRP1Q9C000 1473 aa-0.82□□□□□ -2.54
LINC00354-202ENST00000440860 PAPPA2Q9BXP8 1791 aa-0.83□□□□□ -2.54
LINC00354-202ENST00000440860 ANKRD36A6QL64 1941 aa-0.83□□□□□ -2.54
LINC00354-202ENST00000440860 LAMA2P24043 3122 aaKnown RBP-0.83□□□□□ -2.54
LINC00354-202ENST00000440860 QRICH2Q9H0J4 1663 aa-0.83□□□□□ -2.54
LINC00354-202ENST00000440860 CRYM-AS1A6NIL9 109 aa-0.83□□□□□ -2.54
LINC00354-202ENST00000440860 SCAPERQ9BY12 1400 aa-0.83□□□□□ -2.54
LINC00354-202ENST00000440860 TACC2O95359 2948 aa-0.83□□□□□ -2.54
LINC00354-202ENST00000440860 A2ML1A8K2U0 1454 aa-0.84□□□□□ -2.54
LINC00354-202ENST00000440860 A0A1B0GU69 56 aa-0.84□□□□□ -2.54
LINC00354-202ENST00000440860 I3L3M4 83 aa-0.84□□□□□ -2.54
LINC00354-202ENST00000440860 SNCAP37840 140 aa-0.84□□□□□ -2.54
LINC00354-202ENST00000440860 S100A12P80511 92 aa-0.84□□□□□ -2.54
LINC00354-202ENST00000440860 VAMP8Q9BV40 100 aa-0.84□□□□□ -2.54
LINC00354-202ENST00000440860 RYR2Q92736 4967 aa-0.84□□□□□ -2.54
LINC00354-202ENST00000440860 DNAH6Q9C0G6 4158 aa-0.85□□□□□ -2.54
LINC00354-202ENST00000440860 DPH3P1Q9H4G8 78 aa-0.85□□□□□ -2.55
LINC00354-202ENST00000440860 ROCK2O75116 1388 aaKnown RBP-0.85□□□□□ -2.55
LINC00354-202ENST00000440860 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.85□□□□□ -2.55
LINC00354-202ENST00000440860 K7EP13 123 aa-0.86□□□□□ -2.55
LINC00354-202ENST00000440860 SAA2P0DJI9 122 aaPredicted RBP-0.86□□□□□ -2.55
LINC00354-202ENST00000440860 COL14A1Q05707 1796 aaKnown RBP-0.86□□□□□ -2.55
LINC00354-202ENST00000440860 ADGRL2O95490 1459 aa-0.86□□□□□ -2.55
LINC00354-202ENST00000440860 PLEKHH2Q8IVE3 1493 aa-0.86□□□□□ -2.55
LINC00354-202ENST00000440860 DIP2CQ9Y2E4 1556 aa-0.87□□□□□ -2.55
LINC00354-202ENST00000440860 NBASA2RRP1 2371 aa-0.87□□□□□ -2.55
LINC00354-202ENST00000440860 UBE2D3P61077 147 aa-0.87□□□□□ -2.55
LINC00354-202ENST00000440860 UBE2D2P62837 147 aa-0.87□□□□□ -2.55
LINC00354-202ENST00000440860 H1FX-AS1Q4G0G2 97 aa-0.87□□□□□ -2.55
LINC00354-202ENST00000440860 MUC17Q685J3 4493 aa-0.87□□□□□ -2.55
LINC00354-202ENST00000440860 NALCNQ8IZF0 1738 aa-0.87□□□□□ -2.55
LINC00354-202ENST00000440860 MYOM2P54296 1465 aa-0.87□□□□□ -2.55
LINC00354-202ENST00000440860 TNRC18O15417 2968 aaPredicted RBP-0.87□□□□□ -2.55
LINC00354-202ENST00000440860 TEP1Q99973 2627 aaKnown RBP-0.87□□□□□ -2.55
LINC00354-202ENST00000440860 MARF1Q9Y4F3 1742 aaKnown RBP-0.88□□□□□ -2.55
LINC00354-202ENST00000440860 A0A087WVE0 104 aa-0.88□□□□□ -2.55
LINC00354-202ENST00000440860 HMGN1P05114 100 aa-0.88□□□□□ -2.55
LINC00354-202ENST00000440860 DEFB112Q30KQ8 113 aa-0.88□□□□□ -2.55
LINC00354-202ENST00000440860 PKHD1L1Q86WI1 4243 aa-0.88□□□□□ -2.55
LINC00354-202ENST00000440860 SPTBN4Q9H254 2564 aa-0.89□□□□□ -2.55
LINC00354-202ENST00000440860 KRTDAPP60985 99 aa-0.89□□□□□ -2.55
LINC00354-202ENST00000440860 GNGT1P63211 74 aa-0.89□□□□□ -2.55
LINC00354-202ENST00000440860 HEPN1Q6WQI6 88 aa-0.89□□□□□ -2.55
LINC00354-202ENST00000440860 C6orf201Q7Z4U5 140 aa-0.89□□□□□ -2.55
LINC00354-202ENST00000440860 DNAH3Q8TD57 4116 aa-0.89□□□□□ -2.55
LINC00354-202ENST00000440860 NIPBLQ6KC79 2804 aaeCLIP-0.89□□□□□ -2.55
LINC00354-202ENST00000440860 PRRC2CQ9Y520 2896 aaKnown RBP-0.9□□□□□ -2.55
LINC00354-202ENST00000440860 SPG11Q96JI7 2443 aa-0.9□□□□□ -2.55
LINC00354-202ENST00000440860 KNL1Q8NG31 2342 aa-0.9□□□□□ -2.55
LINC00354-202ENST00000440860 TRAV30A0A087WSZ9 112 aa-0.9□□□□□ -2.55
LINC00354-202ENST00000440860 H0YGG7 62 aa-0.9□□□□□ -2.55
LINC00354-202ENST00000440860 H3BQF6 201 aa-0.9□□□□□ -2.55
LINC00354-202ENST00000440860 GNG4P50150 75 aa-0.9□□□□□ -2.55
LINC00354-202ENST00000440860 PPP3R1P63098 170 aa-0.9□□□□□ -2.55
LINC00354-202ENST00000440860 C9orf62Q8N4C0 152 aa-0.9□□□□□ -2.55
LINC00354-202ENST00000440860 NRKQ7Z2Y5 1582 aa-0.91□□□□□ -2.55
LINC00354-202ENST00000440860 RNF213Q63HN8 5207 aa-0.91□□□□□ -2.55
LINC00354-202ENST00000440860 KNDC1Q76NI1 1749 aa-0.91□□□□□ -2.55
LINC00354-202ENST00000440860 S100A1P23297 94 aa-0.91□□□□□ -2.56
LINC00354-202ENST00000440860 RPL13AP3Q6NVV1 102 aa-0.91□□□□□ -2.56
LINC00354-202ENST00000440860 SPRR2FQ96RM1 72 aa-0.91□□□□□ -2.56
LINC00354-202ENST00000440860 LINC00846Q9NV44 126 aa-0.91□□□□□ -2.56
LINC00354-202ENST00000440860 USP9XQ93008 2570 aaPredicted RBP-0.92□□□□□ -2.56
LINC00354-202ENST00000440860 AKAP13Q12802 2813 aa-0.92□□□□□ -2.56
LINC00354-202ENST00000440860 NKTRP30414 1462 aaKnown RBP-0.92□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms