RNA–Protein interactions for RNA: ENST00000440431.6

SCN3A-204, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 4,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-204ENST00000440431 PCP2Q8IVA1 136 aa3.28□□□□□ -1.88
SCN3A-204ENST00000440431 Q8IZM0 81 aa3.28□□□□□ -1.88
SCN3A-204ENST00000440431 WFDC10AQ9H1F0 79 aa3.28□□□□□ -1.88
SCN3A-204ENST00000440431 CDKN2A-AS1Q9UH64 79 aa3.28□□□□□ -1.88
SCN3A-204ENST00000440431 FLNAP21333 2647 aaKnown RBP3.28□□□□□ -1.89
SCN3A-204ENST00000440431 A0A0B4J2C4 111 aa3.27□□□□□ -1.89
SCN3A-204ENST00000440431 TRBV30A0A0K0K1B3 111 aa3.27□□□□□ -1.89
SCN3A-204ENST00000440431 TMEM223A0PJW6 202 aa3.27□□□□□ -1.89
SCN3A-204ENST00000440431 TSHBP01222 138 aa3.27□□□□□ -1.89
SCN3A-204ENST00000440431 NRACQ8N912 160 aa3.27□□□□□ -1.89
SCN3A-204ENST00000440431 AGRNO00468 2067 aa3.27□□□□□ -1.89
SCN3A-204ENST00000440431 TENM1Q9UKZ4 2725 aa3.27□□□□□ -1.89
SCN3A-204ENST00000440431 EGFEM1PQ0D2K5 195 aa3.27□□□□□ -1.89
SCN3A-204ENST00000440431 KRTAP24-1Q3LI83 254 aa3.27□□□□□ -1.89
SCN3A-204ENST00000440431 HIGD2BQ4VC39 106 aa3.27□□□□□ -1.89
SCN3A-204ENST00000440431 PRR9Q5T870 116 aa3.27□□□□□ -1.89
SCN3A-204ENST00000440431 SPATA3Q8NHX4 192 aa3.27□□□□□ -1.89
SCN3A-204ENST00000440431 NAA38Q9BRA0 125 aaKnown RBP3.27□□□□□ -1.89
SCN3A-204ENST00000440431 C11orf21Q9P2W6 132 aa3.27□□□□□ -1.89
SCN3A-204ENST00000440431 M0R378 163 aa3.27□□□□□ -1.89
SCN3A-204ENST00000440431 TRACP01848 142 aa3.27□□□□□ -1.89
SCN3A-204ENST00000440431 HAMPP81172 84 aa3.27□□□□□ -1.89
SCN3A-204ENST00000440431 ANKRD29Q8N6D5 301 aa3.27□□□□□ -1.89
SCN3A-204ENST00000440431 FBN1P35555 2871 aaKnown RBP3.27□□□□□ -1.89
SCN3A-204ENST00000440431 FHL2Q14192 279 aa3.26□□□□□ -1.89
SCN3A-204ENST00000440431 CDC42SE2Q9NRR3 84 aa3.26□□□□□ -1.89
SCN3A-204ENST00000440431 UBE2D4Q9Y2X8 147 aa3.26□□□□□ -1.89
SCN3A-204ENST00000440431 IGKV2-24A0A0C4DH68 120 aa3.26□□□□□ -1.89
SCN3A-204ENST00000440431 A0A1B0GX51 115 aa3.26□□□□□ -1.89
SCN3A-204ENST00000440431 LINC01620Q4KN68 170 aa3.26□□□□□ -1.89
SCN3A-204ENST00000440431 C2orf91Q6ZV80 131 aa3.26□□□□□ -1.89
SCN3A-204ENST00000440431 C2orf48Q96LS8 159 aa3.26□□□□□ -1.89
SCN3A-204ENST00000440431 DHRS4-AS1Q9P1J3 65 aa3.26□□□□□ -1.89
SCN3A-204ENST00000440431 A0A087WZ39 114 aa3.26□□□□□ -1.89
SCN3A-204ENST00000440431 LINC00173Q6ZV60 143 aa3.26□□□□□ -1.89
SCN3A-204ENST00000440431 RBM3P98179 157 aaKnown RBP3.25□□□□□ -1.89
SCN3A-204ENST00000440431 NREPQ16612 68 aa3.25□□□□□ -1.89
SCN3A-204ENST00000440431 DEFB105AQ8NG35 78 aa3.25□□□□□ -1.89
SCN3A-204ENST00000440431 HIVEP1P15822 2718 aa3.25□□□□□ -1.89
SCN3A-204ENST00000440431 SETD2Q9BYW2 2564 aaPredicted RBP3.25□□□□□ -1.89
SCN3A-204ENST00000440431 hADV29S1A0JD25 119 aa3.25□□□□□ -1.89
SCN3A-204ENST00000440431 C1orf134Q5TEV5 83 aa3.25□□□□□ -1.89
SCN3A-204ENST00000440431 CEMP1Q6PRD7 247 aaPredicted RBP3.25□□□□□ -1.89
SCN3A-204ENST00000440431 UBE2D1P51668 147 aa3.25□□□□□ -1.89
SCN3A-204ENST00000440431 Q6ZTC4 211 aa3.25□□□□□ -1.89
SCN3A-204ENST00000440431 FLNBO75369 2602 aaKnown RBP3.25□□□□□ -1.89
SCN3A-204ENST00000440431 NCR3O14931 201 aa3.25□□□□□ -1.89
SCN3A-204ENST00000440431 FAM19A1Q7Z5A9 133 aa3.25□□□□□ -1.89
SCN3A-204ENST00000440431 ACANP16112 2415 aa3.25□□□□□ -1.89
SCN3A-204ENST00000440431 TRBV10-2A0A0K0K1G8 114 aa3.24□□□□□ -1.89
SCN3A-204ENST00000440431 LECT2O14960 151 aa3.24□□□□□ -1.89
SCN3A-204ENST00000440431 EDN2P20800 178 aa3.24□□□□□ -1.89
SCN3A-204ENST00000440431 LINC00308Q8TCZ7 52 aa3.24□□□□□ -1.89
SCN3A-204ENST00000440431 NTN5Q8WTR8 489 aaPredicted RBP3.24□□□□□ -1.89
SCN3A-204ENST00000440431 IGLV2-18A0A075B6J9 118 aa3.24□□□□□ -1.89
SCN3A-204ENST00000440431 IGKV2D-26A0A0A0MRZ7 120 aa3.24□□□□□ -1.89
SCN3A-204ENST00000440431 ETDBQ3ZM63 59 aa3.24□□□□□ -1.89
SCN3A-204ENST00000440431 SMIM20Q8N5G0 67 aa3.24□□□□□ -1.89
SCN3A-204ENST00000440431 ANAPC13Q9BS18 74 aa3.24□□□□□ -1.89
SCN3A-204ENST00000440431 HIGD2AQ9BW72 106 aa3.24□□□□□ -1.89
SCN3A-204ENST00000440431 HECTD1Q9ULT8 2610 aa3.23□□□□□ -1.89
SCN3A-204ENST00000440431 SETXQ7Z333 2677 aaKnown RBP3.23□□□□□ -1.89
SCN3A-204ENST00000440431 NSD1Q96L73 2696 aaPredicted RBP3.23□□□□□ -1.89
SCN3A-204ENST00000440431 PRB2P02812 416 aaPredicted RBP3.23□□□□□ -1.89
SCN3A-204ENST00000440431 C9orf153Q5TBE3 101 aa3.23□□□□□ -1.89
SCN3A-204ENST00000440431 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.23□□□□□ -1.89
SCN3A-204ENST00000440431 IGIPA6NJ69 53 aa3.23□□□□□ -1.89
SCN3A-204ENST00000440431 CYSRT1A8MQ03 144 aa3.23□□□□□ -1.89
SCN3A-204ENST00000440431 RPL28P46779 137 aaKnown RBP3.23□□□□□ -1.89
SCN3A-204ENST00000440431 LYPD5Q6UWN5 251 aa3.23□□□□□ -1.89
SCN3A-204ENST00000440431 URB1-AS1Q96HZ7 61 aa3.23□□□□□ -1.89
SCN3A-204ENST00000440431 WWC2-AS2Q96NR7 200 aa3.23□□□□□ -1.89
SCN3A-204ENST00000440431 LINC01556Q5JQF7 62 aa3.23□□□□□ -1.89
SCN3A-204ENST00000440431 POM121L12Q8N7R1 296 aa3.23□□□□□ -1.89
SCN3A-204ENST00000440431 LOC100131303A0A0U1RQF7 123 aa3.22□□□□□ -1.89
SCN3A-204ENST00000440431 B5MCH6 92 aa3.22□□□□□ -1.89
SCN3A-204ENST00000440431 H3BMG7 143 aa3.22□□□□□ -1.89
SCN3A-204ENST00000440431 TEN1Q86WV5 123 aa3.22□□□□□ -1.89
SCN3A-204ENST00000440431 WFDC2Q14508 124 aa3.22□□□□□ -1.89
SCN3A-204ENST00000440431 FAM19A4Q96LR4 140 aa3.22□□□□□ -1.89
SCN3A-204ENST00000440431 RETNQ9HD89 108 aa3.22□□□□□ -1.89
SCN3A-204ENST00000440431 TRAV23DV6A0A075B6W5 121 aa3.22□□□□□ -1.89
SCN3A-204ENST00000440431 M0R2N4 97 aa3.22□□□□□ -1.89
SCN3A-204ENST00000440431 FXYD2P54710 66 aa3.22□□□□□ -1.89
SCN3A-204ENST00000440431 MP68P56378 58 aa3.22□□□□□ -1.89
SCN3A-204ENST00000440431 A8MZ25 164 aa3.21□□□□□ -1.89
SCN3A-204ENST00000440431 LINC00242Q5T6M2 205 aa3.21□□□□□ -1.89
SCN3A-204ENST00000440431 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.21□□□□□ -1.89
SCN3A-204ENST00000440431 AMELXQ99217 191 aa3.21□□□□□ -1.89
SCN3A-204ENST00000440431 IGLV5-52A0A0A0MRZ9 124 aa3.21□□□□□ -1.9
SCN3A-204ENST00000440431 TCL1BO95988 128 aa3.21□□□□□ -1.9
SCN3A-204ENST00000440431 MT-ATP8P03928 68 aa3.21□□□□□ -1.9
SCN3A-204ENST00000440431 DAND5Q8N907 189 aa3.21□□□□□ -1.9
SCN3A-204ENST00000440431 C11orf72Q8NBR9 251 aa3.21□□□□□ -1.9
SCN3A-204ENST00000440431 CDIP1Q9H305 208 aa3.21□□□□□ -1.9
SCN3A-204ENST00000440431 K7ERJ3 54 aa3.21□□□□□ -1.9
SCN3A-204ENST00000440431 FAM19A5Q7Z5A7 132 aaPredicted RBP3.21□□□□□ -1.9
SCN3A-204ENST00000440431 A8MTW9 85 aa3.21□□□□□ -1.9
SCN3A-204ENST00000440431 USP17L23D6RBM5 183 aa3.21□□□□□ -1.9
SCN3A-204ENST00000440431 NDUFC2O95298 119 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms