RNA–Protein interactions for RNA: ENST00000439974.3

ITGB1-207, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-207ENST00000439974 TINCRA0A1B0GVN0 87 aa10.1□□□□□ -0.79
ITGB1-207ENST00000439974 NDUFA1O15239 70 aa10.1□□□□□ -0.79
ITGB1-207ENST00000439974 LINC00310P59036 64 aa10.1□□□□□ -0.79
ITGB1-207ENST00000439974 RPL18AQ02543 176 aaKnown RBP10.1□□□□□ -0.79
ITGB1-207ENST00000439974 CHCHD1Q96BP2 118 aaKnown RBP10.1□□□□□ -0.79
ITGB1-207ENST00000439974 C6orf48Q9UBA6 75 aa10.1□□□□□ -0.79
ITGB1-207ENST00000439974 LOC107984640A0A0U1RRK4 108 aa10.09□□□□□ -0.79
ITGB1-207ENST00000439974 SERF1AO75920 110 aa10.09□□□□□ -0.79
ITGB1-207ENST00000439974 SPINK8P0C7L1 97 aa10.09□□□□□ -0.79
ITGB1-207ENST00000439974 MT1HL1P0DM35 61 aa10.09□□□□□ -0.79
ITGB1-207ENST00000439974 LCE2DQ5TA82 110 aaPredicted RBP10.09□□□□□ -0.79
ITGB1-207ENST00000439974 PACRGQ96M98 296 aaPredicted RBP10.09□□□□□ -0.79
ITGB1-207ENST00000439974 NUPR1O60356 82 aa10.08□□□□□ -0.8
ITGB1-207ENST00000439974 SEC11AP67812 179 aa10.08□□□□□ -0.8
ITGB1-207ENST00000439974 LINC01561Q8N1V8 128 aa10.08□□□□□ -0.8
ITGB1-207ENST00000439974 STPG4Q8N801 248 aa10.08□□□□□ -0.8
ITGB1-207ENST00000439974 SMIM1B2RUZ4 78 aa10.07□□□□□ -0.8
ITGB1-207ENST00000439974 HSBP1O75506 76 aa10.07□□□□□ -0.8
ITGB1-207ENST00000439974 ATP5LO75964 103 aa10.07□□□□□ -0.8
ITGB1-207ENST00000439974 PRSS2P07478 247 aa10.07□□□□□ -0.8
ITGB1-207ENST00000439974 PTTG1IPP53801 180 aa10.07□□□□□ -0.8
ITGB1-207ENST00000439974 C9orf116Q5BN46 136 aaPredicted RBP10.07□□□□□ -0.8
ITGB1-207ENST00000439974 MRPL35Q9NZE8 188 aaKnown RBP10.07□□□□□ -0.8
ITGB1-207ENST00000439974 C6orf226Q5I0X4 101 aa10.06□□□□□ -0.8
ITGB1-207ENST00000439974 PKIGQ9Y2B9 76 aa10.06□□□□□ -0.8
ITGB1-207ENST00000439974 IGLV5-45A0A087WSX0 123 aa10.05□□□□□ -0.8
ITGB1-207ENST00000439974 IGLC3P0DOY3 106 aa10.05□□□□□ -0.8
ITGB1-207ENST00000439974 IFI27L1Q96BM0 104 aa10.05□□□□□ -0.8
ITGB1-207ENST00000439974 C11orf86A6NJI1 115 aa10.04□□□□□ -0.8
ITGB1-207ENST00000439974 H0Y8G0 127 aa10.04□□□□□ -0.8
ITGB1-207ENST00000439974 ZNF22P17026 224 aaPredicted RBP10.04□□□□□ -0.8
ITGB1-207ENST00000439974 RNF151Q2KHN1 245 aa10.04□□□□□ -0.8
ITGB1-207ENST00000439974 GAGE2EQ4V326 116 aa10.04□□□□□ -0.8
ITGB1-207ENST00000439974 Q8IZM0 81 aa10.04□□□□□ -0.8
ITGB1-207ENST00000439974 LINC00474Q9P2X8 69 aa10.04□□□□□ -0.8
ITGB1-207ENST00000439974 GAGE2DQ9UEU5 116 aa10.04□□□□□ -0.8
ITGB1-207ENST00000439974 A0A1W2PNN7 141 aa10.03□□□□□ -0.8
ITGB1-207ENST00000439974 F8WDY8 70 aa10.03□□□□□ -0.8
ITGB1-207ENST00000439974 CKS1BP61024 79 aa10.03□□□□□ -0.8
ITGB1-207ENST00000439974 PRR3P79522 188 aaKnown RBP10.03□□□□□ -0.8
ITGB1-207ENST00000439974 Q6ZRP5 223 aa10.03□□□□□ -0.8
ITGB1-207ENST00000439974 CHTOPQ9Y3Y2 248 aaKnown RBP10.03□□□□□ -0.8
ITGB1-207ENST00000439974 FABP4P15090 132 aa10.02□□□□□ -0.81
ITGB1-207ENST00000439974 COX7B2Q8TF08 81 aa10.02□□□□□ -0.81
ITGB1-207ENST00000439974 FAM168BA1KXE4 195 aa10.01□□□□□ -0.81
ITGB1-207ENST00000439974 HIST1H2BKO60814 126 aa10.01□□□□□ -0.81
ITGB1-207ENST00000439974 ATP6V1G1O75348 118 aa10.01□□□□□ -0.81
ITGB1-207ENST00000439974 HIST1H2BJP06899 126 aa10.01□□□□□ -0.81
ITGB1-207ENST00000439974 HIST1H2BOP23527 126 aa10.01□□□□□ -0.81
ITGB1-207ENST00000439974 HIST1H2BBP33778 126 aa10.01□□□□□ -0.81
ITGB1-207ENST00000439974 HIST1H2BDP58876 126 aa10.01□□□□□ -0.81
ITGB1-207ENST00000439974 HIST1H2BCP62807 126 aa10.01□□□□□ -0.81
ITGB1-207ENST00000439974 HIST2H2BEQ16778 126 aa10.01□□□□□ -0.81
ITGB1-207ENST00000439974 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.01□□□□□ -0.81
ITGB1-207ENST00000439974 HIST1H2BHQ93079 126 aa10.01□□□□□ -0.81
ITGB1-207ENST00000439974 HIST1H2BNQ99877 126 aa10.01□□□□□ -0.81
ITGB1-207ENST00000439974 HIST1H2BMQ99879 126 aa10.01□□□□□ -0.81
ITGB1-207ENST00000439974 TRBV30A0A0K0K1B3 111 aa10□□□□□ -0.81
ITGB1-207ENST00000439974 H3BRM9 83 aa10□□□□□ -0.81
ITGB1-207ENST00000439974 TMEM170BQ5T4T1 132 aa10□□□□□ -0.81
ITGB1-207ENST00000439974 LEPROTL1O95214 131 aa9.99□□□□□ -0.81
ITGB1-207ENST00000439974 LRP2P98164 4655 aa9.99□□□□□ -0.81
ITGB1-207ENST00000439974 TRAV12-1A0A0B4J245 112 aa9.97□□□□□ -0.81
ITGB1-207ENST00000439974 F8VRH5 84 aa9.97□□□□□ -0.81
ITGB1-207ENST00000439974 TLX1NBP0CAT3 122 aa9.97□□□□□ -0.81
ITGB1-207ENST00000439974 FAM19A5Q7Z5A7 132 aaPredicted RBP9.97□□□□□ -0.81
ITGB1-207ENST00000439974 LINC01600Q96MT4 127 aa9.97□□□□□ -0.81
ITGB1-207ENST00000439974 IGLV5-39A0A0G2JS06 123 aa9.96□□□□□ -0.82
ITGB1-207ENST00000439974 NDUFC2-KCTD14E9PQ53 114 aa9.96□□□□□ -0.82
ITGB1-207ENST00000439974 C9orf129Q5T035 196 aaKnown RBP9.96□□□□□ -0.82
ITGB1-207ENST00000439974 PHF5AQ7RTV0 110 aaKnown RBP9.96□□□□□ -0.82
ITGB1-207ENST00000439974 PMCHL2Q9BQD1 86 aa9.96□□□□□ -0.82
ITGB1-207ENST00000439974 SPINK6Q6UWN8 80 aa9.95□□□□□ -0.82
ITGB1-207ENST00000439974 XAGE1AQ9HD64 81 aa9.95□□□□□ -0.82
ITGB1-207ENST00000439974 S100A1P23297 94 aa9.94□□□□□ -0.82
ITGB1-207ENST00000439974 CXCL5P42830 114 aa9.94□□□□□ -0.82
ITGB1-207ENST00000439974 ODF1Q14990 250 aa9.94□□□□□ -0.82
ITGB1-207ENST00000439974 KRTAP7-1Q8IUC3 87 aa9.94□□□□□ -0.82
ITGB1-207ENST00000439974 TMEM223A0PJW6 202 aa9.93□□□□□ -0.82
ITGB1-207ENST00000439974 ZNF625Q96I27 306 aaPredicted RBP9.93□□□□□ -0.82
ITGB1-207ENST00000439974 HSPB8Q9UJY1 196 aa9.93□□□□□ -0.82
ITGB1-207ENST00000439974 REG3GQ6UW15 175 aa9.92□□□□□ -0.82
ITGB1-207ENST00000439974 PFN2P35080 140 aa9.91□□□□□ -0.82
ITGB1-207ENST00000439974 SRSF9Q13242 221 aaKnown RBP eCLIP9.9□□□□□ -0.82
ITGB1-207ENST00000439974 KRTAP11-1Q8IUC1 163 aa9.9□□□□□ -0.82
ITGB1-207ENST00000439974 M0QXV9 152 aa9.88□□□□□ -0.83
ITGB1-207ENST00000439974 KRTAP10-8P60410 259 aa9.87□□□□□ -0.83
ITGB1-207ENST00000439974 MAP1LC3CQ9BXW4 147 aa9.87□□□□□ -0.83
ITGB1-207ENST00000439974 RNF213Q63HN8 5207 aa9.86□□□□□ -0.83
ITGB1-207ENST00000439974 A0A0U1RRA0 63 aa9.86□□□□□ -0.83
ITGB1-207ENST00000439974 DPM2O94777 84 aa9.86□□□□□ -0.83
ITGB1-207ENST00000439974 PSORS1C2Q9UIG4 136 aa9.86□□□□□ -0.83
ITGB1-207ENST00000439974 ERG28Q9UKR5 140 aa9.86□□□□□ -0.83
ITGB1-207ENST00000439974 TSPEAR-AS2P59090 65 aa9.85□□□□□ -0.83
ITGB1-207ENST00000439974 SYS1-DBNDD2H3BUS1 97 aa9.84□□□□□ -0.83
ITGB1-207ENST00000439974 IGKCP01834 107 aa9.84□□□□□ -0.83
ITGB1-207ENST00000439974 PLNP26678 52 aa9.84□□□□□ -0.83
ITGB1-207ENST00000439974 COA6Q5JTJ3 125 aaKnown RBP9.84□□□□□ -0.83
ITGB1-207ENST00000439974 C22orf24Q9Y442 160 aa9.84□□□□□ -0.83
ITGB1-207ENST00000439974 UBE2BP63146 152 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms