RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 CSMD2Q7Z408 3487 aa8.35□□□□□ -1.07
SMPD4-209ENST00000439886 TRGV4A0A0C4DH28 118 aa8.35□□□□□ -1.07
SMPD4-209ENST00000439886 HAMPP81172 84 aa8.35□□□□□ -1.07
SMPD4-209ENST00000439886 PRR3P79522 188 aaKnown RBP8.34□□□□□ -1.07
SMPD4-209ENST00000439886 F8WEM9 126 aa8.34□□□□□ -1.07
SMPD4-209ENST00000439886 CCKP06307 115 aa8.33□□□□□ -1.08
SMPD4-209ENST00000439886 CCL18P55774 89 aa8.33□□□□□ -1.08
SMPD4-209ENST00000439886 ORMDL1Q9P0S3 153 aa8.33□□□□□ -1.08
SMPD4-209ENST00000439886 A0A096LPF7 62 aa8.33□□□□□ -1.08
SMPD4-209ENST00000439886 DAD1P61803 113 aa8.33□□□□□ -1.08
SMPD4-209ENST00000439886 MTORP42345 2549 aa8.32□□□□□ -1.08
SMPD4-209ENST00000439886 IGLV5-39A0A0G2JS06 123 aa8.32□□□□□ -1.08
SMPD4-209ENST00000439886 GNLYP22749 145 aa8.32□□□□□ -1.08
SMPD4-209ENST00000439886 ANKRD17O75179 2603 aaKnown RBP8.32□□□□□ -1.08
SMPD4-209ENST00000439886 K7EQD1 137 aa8.31□□□□□ -1.08
SMPD4-209ENST00000439886 NTM-AS1Q6ZSK4 140 aa8.31□□□□□ -1.08
SMPD4-209ENST00000439886 LAMTOR3Q9UHA4 124 aa8.31□□□□□ -1.08
SMPD4-209ENST00000439886 H7BZZ5 65 aa8.31□□□□□ -1.08
SMPD4-209ENST00000439886 RPL28P46779 137 aaKnown RBP8.31□□□□□ -1.08
SMPD4-209ENST00000439886 OVOL2Q9BRP0 275 aa8.31□□□□□ -1.08
SMPD4-209ENST00000439886 CDC42SE2Q9NRR3 84 aa8.31□□□□□ -1.08
SMPD4-209ENST00000439886 CELSR2Q9HCU4 2923 aa8.31□□□□□ -1.08
SMPD4-209ENST00000439886 H0YGX0 51 aa8.31□□□□□ -1.08
SMPD4-209ENST00000439886 Q6JHZ5 121 aa8.31□□□□□ -1.08
SMPD4-209ENST00000439886 MAP6D1Q9H9H5 199 aa8.31□□□□□ -1.08
SMPD4-209ENST00000439886 BEAN1Q3B7T3 259 aa8.3□□□□□ -1.08
SMPD4-209ENST00000439886 RMI2Q96E14 147 aa8.3□□□□□ -1.08
SMPD4-209ENST00000439886 NBEAL2Q6ZNJ1 2754 aa8.3□□□□□ -1.08
SMPD4-209ENST00000439886 IGKV2-28A0A075B6P5 120 aa8.3□□□□□ -1.08
SMPD4-209ENST00000439886 IGKV2D-28P01615 120 aa8.3□□□□□ -1.08
SMPD4-209ENST00000439886 FAM222AQ5U5X8 452 aa8.3□□□□□ -1.08
SMPD4-209ENST00000439886 PLA2G2AP14555 144 aa8.3□□□□□ -1.08
SMPD4-209ENST00000439886 C22orf24Q9Y442 160 aa8.3□□□□□ -1.08
SMPD4-209ENST00000439886 FBN2P35556 2912 aa8.29□□□□□ -1.08
SMPD4-209ENST00000439886 B4DSR2 109 aa8.29□□□□□ -1.08
SMPD4-209ENST00000439886 DEFB130BP0DP73 79 aa8.29□□□□□ -1.08
SMPD4-209ENST00000439886 DEFB130AP0DP74 79 aa8.29□□□□□ -1.08
SMPD4-209ENST00000439886 LYPD5Q6UWN5 251 aa8.29□□□□□ -1.08
SMPD4-209ENST00000439886 UBL5Q9BZL1 73 aa8.29□□□□□ -1.08
SMPD4-209ENST00000439886 UTP20O75691 2785 aaKnown RBP8.29□□□□□ -1.08
SMPD4-209ENST00000439886 A0A087WZ39 114 aa8.28□□□□□ -1.08
SMPD4-209ENST00000439886 IGLV5-45A0A087WSX0 123 aa8.28□□□□□ -1.08
SMPD4-209ENST00000439886 VPS13CQ709C8 3753 aa8.27□□□□□ -1.08
SMPD4-209ENST00000439886 PF4P02776 101 aa8.27□□□□□ -1.09
SMPD4-209ENST00000439886 IGLV4-60A0A075B6I1 120 aa8.27□□□□□ -1.09
SMPD4-209ENST00000439886 IGLV10-54A0A075B6I4 117 aa8.27□□□□□ -1.09
SMPD4-209ENST00000439886 SCXQ7RTU7 201 aa8.27□□□□□ -1.09
SMPD4-209ENST00000439886 C11orf72Q8NBR9 251 aa8.27□□□□□ -1.09
SMPD4-209ENST00000439886 HIVEP2P31629 2446 aa8.26□□□□□ -1.09
SMPD4-209ENST00000439886 FLNCQ14315 2725 aa8.26□□□□□ -1.09
SMPD4-209ENST00000439886 C11orf45Q8TAV5 145 aa8.25□□□□□ -1.09
SMPD4-209ENST00000439886 A8MTW9 85 aa8.25□□□□□ -1.09
SMPD4-209ENST00000439886 WFDC10AQ9H1F0 79 aa8.24□□□□□ -1.09
SMPD4-209ENST00000439886 NOTCH2Q04721 2471 aa8.24□□□□□ -1.09
SMPD4-209ENST00000439886 NF1P21359 2839 aa8.23□□□□□ -1.09
SMPD4-209ENST00000439886 ACANP16112 2415 aa8.23□□□□□ -1.09
SMPD4-209ENST00000439886 LRCOL1A6NCL2 159 aa8.23□□□□□ -1.09
SMPD4-209ENST00000439886 EPM2AB3EWF7 344 aa8.23□□□□□ -1.09
SMPD4-209ENST00000439886 GCN1Q92616 2671 aaKnown RBP8.23□□□□□ -1.09
SMPD4-209ENST00000439886 C1orf158Q8N1D5 194 aa8.22□□□□□ -1.09
SMPD4-209ENST00000439886 C9orf116Q5BN46 136 aaPredicted RBP8.22□□□□□ -1.09
SMPD4-209ENST00000439886 ESM1Q9NQ30 184 aa8.22□□□□□ -1.09
SMPD4-209ENST00000439886 TEX15Q9BXT5 2789 aa8.22□□□□□ -1.09
SMPD4-209ENST00000439886 C6orf99Q4VX62 202 aa8.21□□□□□ -1.09
SMPD4-209ENST00000439886 DEFB114Q30KQ6 69 aa8.21□□□□□ -1.1
SMPD4-209ENST00000439886 PLAC8L1A1L4L8 177 aa8.21□□□□□ -1.1
SMPD4-209ENST00000439886 FAM229BQ4G0N7 80 aa8.21□□□□□ -1.1
SMPD4-209ENST00000439886 MXRA5Q9NR99 2828 aa8.2□□□□□ -1.1
SMPD4-209ENST00000439886 NIPBLQ6KC79 2804 aaeCLIP8.2□□□□□ -1.1
SMPD4-209ENST00000439886 TRBV10-1A0A0K0K1A3 114 aa8.2□□□□□ -1.1
SMPD4-209ENST00000439886 IBA57-AS1B1ANH7 110 aa8.2□□□□□ -1.1
SMPD4-209ENST00000439886 H3BS24 57 aa8.2□□□□□ -1.1
SMPD4-209ENST00000439886 JMJD7-PLA2G4BH0Y9G9 81 aa8.19□□□□□ -1.1
SMPD4-209ENST00000439886 ODF3L2Q3SX64 289 aa8.19□□□□□ -1.1
SMPD4-209ENST00000439886 TRBV6-4A0A1B0GX49 114 aa8.19□□□□□ -1.1
SMPD4-209ENST00000439886 TMEM256-PLSCR3K7ERE1 68 aa8.19□□□□□ -1.1
SMPD4-209ENST00000439886 PRR15Q8IV56 129 aa8.19□□□□□ -1.1
SMPD4-209ENST00000439886 TRAV7A0A075B6U4 112 aa8.18□□□□□ -1.1
SMPD4-209ENST00000439886 LINC00269Q8N2A0 174 aa8.18□□□□□ -1.1
SMPD4-209ENST00000439886 RBM12B-AS1Q9P1G2 102 aa8.18□□□□□ -1.1
SMPD4-209ENST00000439886 LINC01356Q8N9X3 169 aa8.18□□□□□ -1.1
SMPD4-209ENST00000439886 ZNF702PQ9H963 129 aa8.18□□□□□ -1.1
SMPD4-209ENST00000439886 PSPHP1O15172 72 aa8.18□□□□□ -1.1
SMPD4-209ENST00000439886 Q8N814 137 aa8.18□□□□□ -1.1
SMPD4-209ENST00000439886 APOC4P55056 127 aa8.16□□□□□ -1.1
SMPD4-209ENST00000439886 CFAP46Q8IYW2 2715 aa8.16□□□□□ -1.1
SMPD4-209ENST00000439886 TRBV6-8A0A0A6YYG3 113 aa8.16□□□□□ -1.1
SMPD4-209ENST00000439886 Q6ZRU5 148 aa8.16□□□□□ -1.1
SMPD4-209ENST00000439886 IGHV3OR16-9A0A0B4J2B5 98 aa8.16□□□□□ -1.1
SMPD4-209ENST00000439886 LINC00959A0A1B0GUT2 108 aa8.16□□□□□ -1.1
SMPD4-209ENST00000439886 GYPEP15421 78 aa8.16□□□□□ -1.1
SMPD4-209ENST00000439886 DOPEY1Q5JWR5 2465 aa8.16□□□□□ -1.1
SMPD4-209ENST00000439886 HTN3P15516 51 aa8.15□□□□□ -1.1
SMPD4-209ENST00000439886 C6orf223Q8N319 242 aa8.15□□□□□ -1.1
SMPD4-209ENST00000439886 ANGP03950 147 aaKnown RBP8.15□□□□□ -1.1
SMPD4-209ENST00000439886 SPTSSBQ8NFR3 76 aa8.14□□□□□ -1.11
SMPD4-209ENST00000439886 TRAV10A0A0B4J240 114 aa8.14□□□□□ -1.11
SMPD4-209ENST00000439886 KLKP1Q107X0 134 aa8.14□□□□□ -1.11
SMPD4-209ENST00000439886 ESRGQ1W209 222 aa8.14□□□□□ -1.11
SMPD4-209ENST00000439886 DEFB4AO15263 64 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms