RNA–Protein interactions for RNA: ENST00000439603.5

LONRF3-204, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

TSL 1 (best)

Gene LONRF3, Length 1,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-204ENST00000439603 NDUFA1O15239 70 aa15.31■□□□□ 0.04
LONRF3-204ENST00000439603 CXCL5P42830 114 aa15.31■□□□□ 0.04
LONRF3-204ENST00000439603 SLC25A34Q6PIV7 304 aa15.31■□□□□ 0.04
LONRF3-204ENST00000439603 C2orf82Q6UX34 121 aa15.31■□□□□ 0.04
LONRF3-204ENST00000439603 NTN5Q8WTR8 489 aaPredicted RBP15.31■□□□□ 0.04
LONRF3-204ENST00000439603 ZNF625Q96I27 306 aaPredicted RBP15.31■□□□□ 0.04
LONRF3-204ENST00000439603 LRCOL1A6NCL2 159 aa15.31■□□□□ 0.04
LONRF3-204ENST00000439603 TP73-AS1Q9UF72 201 aa15.31■□□□□ 0.04
LONRF3-204ENST00000439603 DLEU1O43261 78 aa15.3■□□□□ 0.04
LONRF3-204ENST00000439603 SFTA2Q6UW10 78 aa15.29■□□□□ 0.04
LONRF3-204ENST00000439603 DDTP30046 118 aa15.29■□□□□ 0.04
LONRF3-204ENST00000439603 C2orf48Q96LS8 159 aa15.29■□□□□ 0.04
LONRF3-204ENST00000439603 UQCR10Q9UDW1 63 aa15.28■□□□□ 0.04
LONRF3-204ENST00000439603 HERV-K104P63124 156 aa15.27■□□□□ 0.03
LONRF3-204ENST00000439603 C14orf177Q52M58 125 aa15.27■□□□□ 0.03
LONRF3-204ENST00000439603 CAMK2N2Q96S95 79 aa15.27■□□□□ 0.03
LONRF3-204ENST00000439603 UNQ6190/PRO20217Q6UXQ8 127 aa15.26■□□□□ 0.03
LONRF3-204ENST00000439603 F8WDY8 70 aa15.25■□□□□ 0.03
LONRF3-204ENST00000439603 C10orf25Q5T742 122 aa15.25■□□□□ 0.03
LONRF3-204ENST00000439603 MIEN1Q9BRT3 115 aa15.25■□□□□ 0.03
LONRF3-204ENST00000439603 A0A0J9YXY3 114 aa15.25■□□□□ 0.03
LONRF3-204ENST00000439603 SCGB1D4Q6XE38 83 aa15.25■□□□□ 0.03
LONRF3-204ENST00000439603 A0A087WTM6 91 aa15.24■□□□□ 0.03
LONRF3-204ENST00000439603 RTL8CO15255 209 aa15.24■□□□□ 0.03
LONRF3-204ENST00000439603 SLPIP03973 132 aa15.22■□□□□ 0.03
LONRF3-204ENST00000439603 SYCNQ0VAF6 134 aa15.22■□□□□ 0.03
LONRF3-204ENST00000439603 Q6ZRU5 148 aa15.22■□□□□ 0.03
LONRF3-204ENST00000439603 KMT2CQ8NEZ4 4911 aaKnown RBP15.21■□□□□ 0.03
LONRF3-204ENST00000439603 DNAH17Q9UFH2 4485 aa15.2■□□□□ 0.02
LONRF3-204ENST00000439603 MEIG1Q5JSS6 88 aa15.2■□□□□ 0.02
LONRF3-204ENST00000439603 Q8N814 137 aa15.2■□□□□ 0.02
LONRF3-204ENST00000439603 C6orf48Q9UBA6 75 aa15.2■□□□□ 0.02
LONRF3-204ENST00000439603 TRBV30A0A0K0K1B3 111 aa15.19■□□□□ 0.02
LONRF3-204ENST00000439603 TNP2Q05952 138 aa15.19■□□□□ 0.02
LONRF3-204ENST00000439603 C2orf91Q6ZV80 131 aa15.19■□□□□ 0.02
LONRF3-204ENST00000439603 CARD19Q96LW7 228 aa15.18■□□□□ 0.02
LONRF3-204ENST00000439603 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.18■□□□□ 0.02
LONRF3-204ENST00000439603 C9orf116Q5BN46 136 aaPredicted RBP15.18■□□□□ 0.02
LONRF3-204ENST00000439603 ERG28Q9UKR5 140 aa15.18■□□□□ 0.02
LONRF3-204ENST00000439603 CIRBPQ14011 172 aaKnown RBP15.17■□□□□ 0.02
LONRF3-204ENST00000439603 HIGD1BQ9P298 99 aa15.17■□□□□ 0.02
LONRF3-204ENST00000439603 CNBPP62633 177 aaKnown RBP15.16■□□□□ 0.02
LONRF3-204ENST00000439603 A0A0U1RRA0 63 aa15.16■□□□□ 0.02
LONRF3-204ENST00000439603 TIMM17BO60830 172 aa15.16■□□□□ 0.02
LONRF3-204ENST00000439603 SMIM13P0DJ93 91 aa15.16■□□□□ 0.02
LONRF3-204ENST00000439603 PFN2P35080 140 aa15.16■□□□□ 0.02
LONRF3-204ENST00000439603 HNRNPA3P51991 378 aaKnown RBP15.16■□□□□ 0.02
LONRF3-204ENST00000439603 LITAFQ99732 161 aa15.15■□□□□ 0.02
LONRF3-204ENST00000439603 FRAS1Q86XX4 4008 aa15.15■□□□□ 0.02
LONRF3-204ENST00000439603 RYR2Q92736 4967 aa15.15■□□□□ 0.02
LONRF3-204ENST00000439603 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.14■□□□□ 0.01
LONRF3-204ENST00000439603 COX17Q14061 63 aa15.14■□□□□ 0.01
LONRF3-204ENST00000439603 TMEM238C9JI98 176 aa15.14■□□□□ 0.01
LONRF3-204ENST00000439603 EREGO14944 169 aa15.14■□□□□ 0.01
LONRF3-204ENST00000439603 LINC00158P58513 81 aa15.14■□□□□ 0.01
LONRF3-204ENST00000439603 RNF151Q2KHN1 245 aa15.14■□□□□ 0.01
LONRF3-204ENST00000439603 ADAMTSL4-AS1Q5T5F5 129 aa15.13■□□□□ 0.01
LONRF3-204ENST00000439603 SPANXB1Q9NS25 103 aaPredicted RBP15.11■□□□□ 0.01
LONRF3-204ENST00000439603 DAND5Q8N907 189 aa15.1■□□□□ 0.01
LONRF3-204ENST00000439603 SRSF9Q13242 221 aaKnown RBP eCLIP15.1■□□□□ 0.01
LONRF3-204ENST00000439603 LBHQ53QV2 105 aaPredicted RBP15.1■□□□□ 0.01
LONRF3-204ENST00000439603 MIR7-3HGQ8N6C7 128 aa15.09■□□□□ 0.01
LONRF3-204ENST00000439603 SPANXDQ9BXN6 97 aa15.08■□□□□ 0.01
LONRF3-204ENST00000439603 SPANXCQ9NY87 97 aa15.08■□□□□ 0.01
LONRF3-204ENST00000439603 NDUFC2-KCTD14E9PQ53 114 aa15.08■□□□□ 0
LONRF3-204ENST00000439603 HIST1H4GQ99525 98 aa15.08■□□□□ 0
LONRF3-204ENST00000439603 Q6ZVH6 145 aa15.07■□□□□ 0
LONRF3-204ENST00000439603 LINC00336Q6ZUF6 198 aa15.06■□□□□ 0
LONRF3-204ENST00000439603 C9orf163Q8N9P6 203 aa15.06■□□□□ 0
LONRF3-204ENST00000439603 TLX1NBP0CAT3 122 aa15.06■□□□□ 0
LONRF3-204ENST00000439603 FAT2Q9NYQ8 4349 aa15.05■□□□□ 0
LONRF3-204ENST00000439603 NPC2P61916 151 aa15.03■□□□□ -0
LONRF3-204ENST00000439603 TAL2Q16559 108 aa15.03■□□□□ -0
LONRF3-204ENST00000439603 Q6ZRP5 223 aa15.03■□□□□ -0
LONRF3-204ENST00000439603 FUSP35637 526 aaKnown RBP eCLIP15.03■□□□□ -0
LONRF3-204ENST00000439603 HSD52Q0P140 79 aa15.03■□□□□ -0
LONRF3-204ENST00000439603 LOC107984640A0A0U1RRK4 108 aa15.02■□□□□ -0
LONRF3-204ENST00000439603 LINC00308Q8TCZ7 52 aa15.02■□□□□ -0
LONRF3-204ENST00000439603 SND1-IT1Q9HBX3 110 aa15.02■□□□□ -0
LONRF3-204ENST00000439603 RPL18AQ02543 176 aaKnown RBP15.01□□□□□ -0.01
LONRF3-204ENST00000439603 MUSTN1Q8IVN3 82 aa15.01□□□□□ -0.01
LONRF3-204ENST00000439603 IGLV5-52A0A0A0MRZ9 124 aa15.01□□□□□ -0.01
LONRF3-204ENST00000439603 IFITM1P13164 125 aa15.01□□□□□ -0.01
LONRF3-204ENST00000439603 PTTG1IPP53801 180 aa15.01□□□□□ -0.01
LONRF3-204ENST00000439603 GAGE2EQ4V326 116 aa15.01□□□□□ -0.01
LONRF3-204ENST00000439603 GAGE2DQ9UEU5 116 aa15.01□□□□□ -0.01
LONRF3-204ENST00000439603 EIF4EBP3O60516 100 aaPredicted RBP15□□□□□ -0.01
LONRF3-204ENST00000439603 GCSHP23434 173 aa15□□□□□ -0.01
LONRF3-204ENST00000439603 LINC01620Q4KN68 170 aa14.99□□□□□ -0.01
LONRF3-204ENST00000439603 SOSTDC1Q6X4U4 206 aa14.99□□□□□ -0.01
LONRF3-204ENST00000439603 CEND1Q8N111 149 aa14.99□□□□□ -0.01
LONRF3-204ENST00000439603 M0R143 59 aa14.99□□□□□ -0.01
LONRF3-204ENST00000439603 KRTAP10-2P60368 255 aa14.99□□□□□ -0.01
LONRF3-204ENST00000439603 DNAH11Q96DT5 4516 aa14.99□□□□□ -0.01
LONRF3-204ENST00000439603 GAGE2BQ13066 116 aa14.98□□□□□ -0.01
LONRF3-204ENST00000439603 COPS9Q8WXC6 57 aa14.98□□□□□ -0.01
LONRF3-204ENST00000439603 SNHG12Q9BXW3 62 aa14.98□□□□□ -0.01
LONRF3-204ENST00000439603 XAGE1AQ9HD64 81 aa14.98□□□□□ -0.01
LONRF3-204ENST00000439603 LOC107984156A0A0G2JMH3 177 aa14.97□□□□□ -0.01
LONRF3-204ENST00000439603 SDIM1Q6ZPB5 146 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms