RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 IGLV3-19P01714 112 aa1.94□□□□□ -2.1
HMGB1P12-201ENST00000438594 S100A3P33764 101 aa1.94□□□□□ -2.1
HMGB1P12-201ENST00000438594 C10orf55Q5SWW7 151 aa1.94□□□□□ -2.1
HMGB1P12-201ENST00000438594 BAGE3Q86Y29 109 aa1.94□□□□□ -2.1
HMGB1P12-201ENST00000438594 BAGE2Q86Y30 109 aa1.94□□□□□ -2.1
HMGB1P12-201ENST00000438594 WFDC10AQ9H1F0 79 aa1.94□□□□□ -2.1
HMGB1P12-201ENST00000438594 SNURFQ9Y675 71 aa1.94□□□□□ -2.1
HMGB1P12-201ENST00000438594 LINC01558Q9Y6Z2 57 aa1.94□□□□□ -2.1
HMGB1P12-201ENST00000438594 R4GMQ9 66 aa1.94□□□□□ -2.1
HMGB1P12-201ENST00000438594 COL6A3P12111 3177 aa1.94□□□□□ -2.1
HMGB1P12-201ENST00000438594 ESPL1Q14674 2120 aa1.94□□□□□ -2.1
HMGB1P12-201ENST00000438594 UNC13CQ8NB66 2214 aa1.94□□□□□ -2.1
HMGB1P12-201ENST00000438594 ZFHX2Q9C0A1 2572 aaPredicted RBP1.94□□□□□ -2.1
HMGB1P12-201ENST00000438594 MED12Q93074 2177 aa1.93□□□□□ -2.1
HMGB1P12-201ENST00000438594 PDCD11Q14690 1871 aaKnown RBP1.93□□□□□ -2.1
HMGB1P12-201ENST00000438594 IGLV4-60A0A075B6I1 120 aa1.93□□□□□ -2.1
HMGB1P12-201ENST00000438594 M0R3E3 92 aa1.93□□□□□ -2.1
HMGB1P12-201ENST00000438594 DNAL4O96015 105 aa1.93□□□□□ -2.1
HMGB1P12-201ENST00000438594 PLAC8Q9NZF1 115 aa1.93□□□□□ -2.1
HMGB1P12-201ENST00000438594 ARFGEF3Q5TH69 2177 aa1.93□□□□□ -2.1
HMGB1P12-201ENST00000438594 BAZ2BQ9UIF8 2168 aaKnown RBP1.92□□□□□ -2.1
HMGB1P12-201ENST00000438594 A0A087WVE0 104 aa1.92□□□□□ -2.1
HMGB1P12-201ENST00000438594 TRBV7-4A0A0J9YYF1 115 aa1.92□□□□□ -2.1
HMGB1P12-201ENST00000438594 SNRPGP15A8MWD9 76 aa1.92□□□□□ -2.1
HMGB1P12-201ENST00000438594 M0R135 149 aa1.92□□□□□ -2.1
HMGB1P12-201ENST00000438594 LINC00315P59091 139 aa1.92□□□□□ -2.1
HMGB1P12-201ENST00000438594 RPL37AP61513 92 aaKnown RBP1.92□□□□□ -2.1
HMGB1P12-201ENST00000438594 FXYD3Q14802 87 aa1.92□□□□□ -2.1
HMGB1P12-201ENST00000438594 KRTAP13-2Q52LG2 175 aa1.92□□□□□ -2.1
HMGB1P12-201ENST00000438594 HCP5Q6MZN7 132 aa1.92□□□□□ -2.1
HMGB1P12-201ENST00000438594 CYYR1Q96J86 154 aa1.92□□□□□ -2.1
HMGB1P12-201ENST00000438594 FAM103A1Q9BTL3 118 aaKnown RBP1.92□□□□□ -2.1
HMGB1P12-201ENST00000438594 FXYD6Q9H0Q3 95 aa1.92□□□□□ -2.1
HMGB1P12-201ENST00000438594 GNG13Q9P2W3 67 aa1.92□□□□□ -2.1
HMGB1P12-201ENST00000438594 KLK9Q9UKQ9 250 aa1.92□□□□□ -2.1
HMGB1P12-201ENST00000438594 GBF1Q92538 1859 aa1.92□□□□□ -2.1
HMGB1P12-201ENST00000438594 COL4A2P08572 1712 aa1.91□□□□□ -2.1
HMGB1P12-201ENST00000438594 PI4KAP42356 2102 aa1.91□□□□□ -2.1
HMGB1P12-201ENST00000438594 PRRC2BQ5JSZ5 2229 aaKnown RBP1.91□□□□□ -2.1
HMGB1P12-201ENST00000438594 ABCA4P78363 2273 aa1.91□□□□□ -2.1
HMGB1P12-201ENST00000438594 IGKV2-40A0A087WW87 121 aaPredicted RBP1.91□□□□□ -2.1
HMGB1P12-201ENST00000438594 IGKV2-29A2NJV5 120 aaPredicted RBP1.91□□□□□ -2.1
HMGB1P12-201ENST00000438594 IGKV2D-40P01614 121 aaPredicted RBP1.91□□□□□ -2.1
HMGB1P12-201ENST00000438594 IGLV6-57P01721 117 aa1.91□□□□□ -2.1
HMGB1P12-201ENST00000438594 IL9P15248 144 aa1.91□□□□□ -2.1
HMGB1P12-201ENST00000438594 ZNF137PP52743 207 aa1.91□□□□□ -2.1
HMGB1P12-201ENST00000438594 GDF5OSQ5U4N7 250 aa1.91□□□□□ -2.1
HMGB1P12-201ENST00000438594 C5orf56Q8N8D9 126 aa1.91□□□□□ -2.1
HMGB1P12-201ENST00000438594 LINC00304Q8N9R0 145 aa1.91□□□□□ -2.1
HMGB1P12-201ENST00000438594 WFDC6Q9BQY6 131 aa1.91□□□□□ -2.1
HMGB1P12-201ENST00000438594 ANAPC11Q9NYG5 84 aa1.91□□□□□ -2.1
HMGB1P12-201ENST00000438594 V9GYV3 84 aa1.91□□□□□ -2.1
HMGB1P12-201ENST00000438594 CEP192Q8TEP8 1941 aa1.91□□□□□ -2.1
HMGB1P12-201ENST00000438594 TSC2P49815 1807 aa1.91□□□□□ -2.1
HMGB1P12-201ENST00000438594 PTPN13Q12923 2485 aa1.91□□□□□ -2.1
HMGB1P12-201ENST00000438594 SPAG17Q6Q759 2223 aa1.9□□□□□ -2.1
HMGB1P12-201ENST00000438594 H3BRN7 92 aa1.9□□□□□ -2.11
HMGB1P12-201ENST00000438594 UQCR11O14957 56 aa1.9□□□□□ -2.11
HMGB1P12-201ENST00000438594 HMGA1P17096 107 aaKnown RBP1.9□□□□□ -2.11
HMGB1P12-201ENST00000438594 ATXN8Q156A1 80 aa1.9□□□□□ -2.11
HMGB1P12-201ENST00000438594 SPTBP11277 2137 aa1.9□□□□□ -2.11
HMGB1P12-201ENST00000438594 TNRC6BQ9UPQ9 1833 aaKnown RBP1.89□□□□□ -2.11
HMGB1P12-201ENST00000438594 TRGV4A0A0C4DH28 118 aa1.89□□□□□ -2.11
HMGB1P12-201ENST00000438594 CTXND1A0A1B0GTU2 59 aa1.89□□□□□ -2.11
HMGB1P12-201ENST00000438594 INE1O15225 51 aa1.89□□□□□ -2.11
HMGB1P12-201ENST00000438594 FXYD4P59646 89 aa1.89□□□□□ -2.11
HMGB1P12-201ENST00000438594 TET1Q8NFU7 2136 aa1.89□□□□□ -2.11
HMGB1P12-201ENST00000438594 SPRR4Q96PI1 79 aa1.89□□□□□ -2.11
HMGB1P12-201ENST00000438594 LINC00846Q9NV44 126 aa1.89□□□□□ -2.11
HMGB1P12-201ENST00000438594 TMEM14CQ9P0S9 112 aa1.89□□□□□ -2.11
HMGB1P12-201ENST00000438594 SETD2Q9BYW2 2564 aaPredicted RBP1.89□□□□□ -2.11
HMGB1P12-201ENST00000438594 BRWD1Q9NSI6 2320 aa1.88□□□□□ -2.11
HMGB1P12-201ENST00000438594 PRR9Q5T870 116 aa1.88□□□□□ -2.11
HMGB1P12-201ENST00000438594 PP632Q6XCG6 107 aa1.88□□□□□ -2.11
HMGB1P12-201ENST00000438594 LINC00322Q6ZN03 302 aaPredicted RBP1.88□□□□□ -2.11
HMGB1P12-201ENST00000438594 DEFB107AQ8IZN7 70 aa1.88□□□□□ -2.11
HMGB1P12-201ENST00000438594 LINC00208Q96KT6 92 aa1.88□□□□□ -2.11
HMGB1P12-201ENST00000438594 Q96NJ1 140 aa1.88□□□□□ -2.11
HMGB1P12-201ENST00000438594 PLXNB2O15031 1838 aa1.88□□□□□ -2.11
HMGB1P12-201ENST00000438594 MYO7BQ6PIF6 2116 aa1.88□□□□□ -2.11
HMGB1P12-201ENST00000438594 HTTP42858 3142 aa1.87□□□□□ -2.11
HMGB1P12-201ENST00000438594 IGKV2-28A0A075B6P5 120 aa1.87□□□□□ -2.11
HMGB1P12-201ENST00000438594 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.87□□□□□ -2.11
HMGB1P12-201ENST00000438594 LOC110117498A0A087WWA1 95 aa1.87□□□□□ -2.11
HMGB1P12-201ENST00000438594 IGKV2D-28P01615 120 aa1.87□□□□□ -2.11
HMGB1P12-201ENST00000438594 MGPP08493 103 aa1.87□□□□□ -2.11
HMGB1P12-201ENST00000438594 IFI6P09912 130 aa1.87□□□□□ -2.11
HMGB1P12-201ENST00000438594 SPINK7P58062 85 aa1.87□□□□□ -2.11
HMGB1P12-201ENST00000438594 NAV2Q8IVL1 2488 aa1.87□□□□□ -2.11
HMGB1P12-201ENST00000438594 SHANK1Q9Y566 2161 aa1.87□□□□□ -2.11
HMGB1P12-201ENST00000438594 BRCA2P51587 3418 aa1.87□□□□□ -2.11
HMGB1P12-201ENST00000438594 ATRXP46100 2492 aa1.86□□□□□ -2.11
HMGB1P12-201ENST00000438594 ABCA2Q9BZC7 2435 aa1.86□□□□□ -2.11
HMGB1P12-201ENST00000438594 HELZ2Q9BYK8 2649 aaKnown RBP1.86□□□□□ -2.11
HMGB1P12-201ENST00000438594 A0A1B0GUT8 65 aa1.86□□□□□ -2.11
HMGB1P12-201ENST00000438594 LINC01549A6NIU2 74 aa1.86□□□□□ -2.11
HMGB1P12-201ENST00000438594 M0R2N4 97 aa1.86□□□□□ -2.11
HMGB1P12-201ENST00000438594 HCRTO43612 131 aa1.86□□□□□ -2.11
HMGB1P12-201ENST00000438594 SPATA8Q6RVD6 105 aa1.86□□□□□ -2.11
HMGB1P12-201ENST00000438594 ZNF625Q96I27 306 aaPredicted RBP1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms