RNA–Protein interactions for RNA: ENST00000434101.6

TRAPPC4-202, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 794 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-202ENST00000434101 LINC00469Q8N7U9 141 aa8.23□□□□□ -1.09
TRAPPC4-202ENST00000434101 C18orf32Q8TCD1 76 aa8.23□□□□□ -1.09
TRAPPC4-202ENST00000434101 HERC1Q15751 4861 aa8.22□□□□□ -1.09
TRAPPC4-202ENST00000434101 NDUFC2-KCTD14E9PQ53 114 aa8.22□□□□□ -1.09
TRAPPC4-202ENST00000434101 LINC00614P0C842 121 aa8.22□□□□□ -1.09
TRAPPC4-202ENST00000434101 RAB5BP61020 215 aa8.22□□□□□ -1.09
TRAPPC4-202ENST00000434101 GAGE2EQ4V326 116 aa8.22□□□□□ -1.09
TRAPPC4-202ENST00000434101 CST9LQ9H4G1 147 aa8.22□□□□□ -1.09
TRAPPC4-202ENST00000434101 GAGE2DQ9UEU5 116 aa8.22□□□□□ -1.09
TRAPPC4-202ENST00000434101 LRP1Q07954 4544 aaKnown RBP8.21□□□□□ -1.09
TRAPPC4-202ENST00000434101 CXCL5P42830 114 aa8.21□□□□□ -1.1
TRAPPC4-202ENST00000434101 IGLV5-45A0A087WSX0 123 aa8.2□□□□□ -1.1
TRAPPC4-202ENST00000434101 HBDP02042 147 aa8.2□□□□□ -1.1
TRAPPC4-202ENST00000434101 PDZD11Q5EBL8 140 aa8.2□□□□□ -1.1
TRAPPC4-202ENST00000434101 FAT3Q8TDW7 4589 aa8.19□□□□□ -1.1
TRAPPC4-202ENST00000434101 SMIM1B2RUZ4 78 aa8.19□□□□□ -1.1
TRAPPC4-202ENST00000434101 F8VRH5 84 aa8.19□□□□□ -1.1
TRAPPC4-202ENST00000434101 SPINK6Q6UWN8 80 aa8.19□□□□□ -1.1
TRAPPC4-202ENST00000434101 PHF5AQ7RTV0 110 aaKnown RBP8.19□□□□□ -1.1
TRAPPC4-202ENST00000434101 A0A096LNJ9 63 aa8.18□□□□□ -1.1
TRAPPC4-202ENST00000434101 H3BRM9 83 aa8.18□□□□□ -1.1
TRAPPC4-202ENST00000434101 FAM19A5Q7Z5A7 132 aaPredicted RBP8.18□□□□□ -1.1
TRAPPC4-202ENST00000434101 COX7B2Q8TF08 81 aa8.18□□□□□ -1.1
TRAPPC4-202ENST00000434101 URB1-AS1Q96HZ7 61 aa8.18□□□□□ -1.1
TRAPPC4-202ENST00000434101 YPEL4Q96NS1 127 aa8.18□□□□□ -1.1
TRAPPC4-202ENST00000434101 FAM168BA1KXE4 195 aa8.17□□□□□ -1.1
TRAPPC4-202ENST00000434101 ATP5LO75964 103 aa8.17□□□□□ -1.1
TRAPPC4-202ENST00000434101 NDUFA6P56556 154 aa8.17□□□□□ -1.1
TRAPPC4-202ENST00000434101 SERTAD4-AS1Q5TG53 156 aa8.17□□□□□ -1.1
TRAPPC4-202ENST00000434101 PSORS1C2Q9UIG4 136 aa8.17□□□□□ -1.1
TRAPPC4-202ENST00000434101 SPINK8P0C7L1 97 aa8.16□□□□□ -1.1
TRAPPC4-202ENST00000434101 IGLC3P0DOY3 106 aa8.16□□□□□ -1.1
TRAPPC4-202ENST00000434101 REG3GQ6UW15 175 aa8.16□□□□□ -1.1
TRAPPC4-202ENST00000434101 M0QXV9 152 aa8.15□□□□□ -1.1
TRAPPC4-202ENST00000434101 SRSF9Q13242 221 aaKnown RBP eCLIP8.15□□□□□ -1.1
TRAPPC4-202ENST00000434101 PMCHL1Q16048 86 aa8.15□□□□□ -1.1
TRAPPC4-202ENST00000434101 C1orf137Q5JT78 98 aa8.15□□□□□ -1.1
TRAPPC4-202ENST00000434101 C9orf129Q5T035 196 aaKnown RBP8.15□□□□□ -1.1
TRAPPC4-202ENST00000434101 CHCHD1Q96BP2 118 aaKnown RBP8.15□□□□□ -1.1
TRAPPC4-202ENST00000434101 CBLN2Q8IUK8 224 aa8.14□□□□□ -1.11
TRAPPC4-202ENST00000434101 MT1HL1P0DM35 61 aa8.13□□□□□ -1.11
TRAPPC4-202ENST00000434101 UBE2BP63146 152 aa8.13□□□□□ -1.11
TRAPPC4-202ENST00000434101 LINC01600Q96MT4 127 aa8.13□□□□□ -1.11
TRAPPC4-202ENST00000434101 BAGE3Q86Y29 109 aa8.12□□□□□ -1.11
TRAPPC4-202ENST00000434101 KRTAP7-1Q8IUC3 87 aa8.12□□□□□ -1.11
TRAPPC4-202ENST00000434101 XAGE1AQ9HD64 81 aa8.12□□□□□ -1.11
TRAPPC4-202ENST00000434101 IGLV5-39A0A0G2JS06 123 aa8.11□□□□□ -1.11
TRAPPC4-202ENST00000434101 ZNF22P17026 224 aaPredicted RBP8.11□□□□□ -1.11
TRAPPC4-202ENST00000434101 ODF1Q14990 250 aa8.11□□□□□ -1.11
TRAPPC4-202ENST00000434101 SLC7A5P1Q8MH63 180 aa8.11□□□□□ -1.11
TRAPPC4-202ENST00000434101 IGLV7-43P04211 117 aa8.1□□□□□ -1.11
TRAPPC4-202ENST00000434101 LBHQ53QV2 105 aaPredicted RBP8.1□□□□□ -1.11
TRAPPC4-202ENST00000434101 C11orf86A6NJI1 115 aa8.09□□□□□ -1.11
TRAPPC4-202ENST00000434101 HSBP1O75506 76 aa8.09□□□□□ -1.11
TRAPPC4-202ENST00000434101 TMEM170BQ5T4T1 132 aa8.09□□□□□ -1.11
TRAPPC4-202ENST00000434101 DIRC1Q969H9 104 aa8.09□□□□□ -1.11
TRAPPC4-202ENST00000434101 IFI27L1Q96BM0 104 aa8.09□□□□□ -1.11
TRAPPC4-202ENST00000434101 CHTOPQ9Y3Y2 248 aaKnown RBP8.09□□□□□ -1.11
TRAPPC4-202ENST00000434101 TRAV12-1A0A0B4J245 112 aa8.08□□□□□ -1.12
TRAPPC4-202ENST00000434101 TRGC2P03986 189 aa8.08□□□□□ -1.12
TRAPPC4-202ENST00000434101 SFTA2Q6UW10 78 aa8.08□□□□□ -1.12
TRAPPC4-202ENST00000434101 KRTAP11-1Q8IUC1 163 aa8.08□□□□□ -1.12
TRAPPC4-202ENST00000434101 TP73-AS1Q9UF72 201 aa8.08□□□□□ -1.12
TRAPPC4-202ENST00000434101 C22orf24Q9Y442 160 aa8.08□□□□□ -1.12
TRAPPC4-202ENST00000434101 ATP6V1G1O75348 118 aa8.07□□□□□ -1.12
TRAPPC4-202ENST00000434101 PLA2G2DQ9UNK4 145 aa8.07□□□□□ -1.12
TRAPPC4-202ENST00000434101 S100A1P23297 94 aa8.06□□□□□ -1.12
TRAPPC4-202ENST00000434101 MRPL55Q7Z7F7 128 aaKnown RBP8.06□□□□□ -1.12
TRAPPC4-202ENST00000434101 NUPR1O60356 82 aa8.05□□□□□ -1.12
TRAPPC4-202ENST00000434101 FAM19A2Q8N3H0 131 aa8.05□□□□□ -1.12
TRAPPC4-202ENST00000434101 H0Y9J4 135 aa8.04□□□□□ -1.12
TRAPPC4-202ENST00000434101 PFN2P35080 140 aa8.04□□□□□ -1.12
TRAPPC4-202ENST00000434101 KRTAP10-8P60410 259 aa8.04□□□□□ -1.12
TRAPPC4-202ENST00000434101 COX17Q14061 63 aa8.04□□□□□ -1.12
TRAPPC4-202ENST00000434101 ERG28Q9UKR5 140 aa8.04□□□□□ -1.12
TRAPPC4-202ENST00000434101 IGLV5-37A0A075B6J1 123 aa8.03□□□□□ -1.12
TRAPPC4-202ENST00000434101 NKAPP1Q8N9T2 125 aa8.03□□□□□ -1.12
TRAPPC4-202ENST00000434101 TNXBP22105 4242 aa8.03□□□□□ -1.12
TRAPPC4-202ENST00000434101 TMEM223A0PJW6 202 aa8.02□□□□□ -1.13
TRAPPC4-202ENST00000434101 COLCA2A8K830 154 aa8.02□□□□□ -1.13
TRAPPC4-202ENST00000434101 SERF1AO75920 110 aa8.02□□□□□ -1.13
TRAPPC4-202ENST00000434101 LEPROTL1O95214 131 aa8.02□□□□□ -1.13
TRAPPC4-202ENST00000434101 ZNF625Q96I27 306 aaPredicted RBP8.01□□□□□ -1.13
TRAPPC4-202ENST00000434101 LINC00167Q96N53 147 aa8.01□□□□□ -1.13
TRAPPC4-202ENST00000434101 H0Y8G0 127 aa8□□□□□ -1.13
TRAPPC4-202ENST00000434101 ZNF861PO60384 105 aa8□□□□□ -1.13
TRAPPC4-202ENST00000434101 SND1-IT1Q9HBX3 110 aa8□□□□□ -1.13
TRAPPC4-202ENST00000434101 HSPB8Q9UJY1 196 aa8□□□□□ -1.13
TRAPPC4-202ENST00000434101 RPL37AP8A6NKH3 93 aa7.99□□□□□ -1.13
TRAPPC4-202ENST00000434101 BCE1O60756 84 aa7.99□□□□□ -1.13
TRAPPC4-202ENST00000434101 RPL28P46779 137 aaKnown RBP7.99□□□□□ -1.13
TRAPPC4-202ENST00000434101 LINC00310P59036 64 aa7.99□□□□□ -1.13
TRAPPC4-202ENST00000434101 RPL24P83731 157 aaKnown RBP7.99□□□□□ -1.13
TRAPPC4-202ENST00000434101 GAGE10A6NGK3 116 aa7.98□□□□□ -1.13
TRAPPC4-202ENST00000434101 LINC00158P58513 81 aa7.98□□□□□ -1.13
TRAPPC4-202ENST00000434101 IGLV1-50A0A075B6I6 118 aa7.97□□□□□ -1.13
TRAPPC4-202ENST00000434101 PLNP26678 52 aa7.97□□□□□ -1.13
TRAPPC4-202ENST00000434101 HERV-K104P63124 156 aa7.97□□□□□ -1.13
TRAPPC4-202ENST00000434101 LINC00587B1AMM8 73 aa7.96□□□□□ -1.14
TRAPPC4-202ENST00000434101 VPREB1P12018 145 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms