RNA–Protein interactions for RNA: ENST00000433972.1

RPUSD3-208, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-208ENST00000433972 A0A0J9YXV3 536 aa9.31□□□□□ -0.92
RPUSD3-208ENST00000433972 TINCRA0A1B0GVN0 87 aa9.31□□□□□ -0.92
RPUSD3-208ENST00000433972 NDUFA1O15239 70 aa9.31□□□□□ -0.92
RPUSD3-208ENST00000433972 HSBP1O75506 76 aa9.31□□□□□ -0.92
RPUSD3-208ENST00000433972 Q6ZRP5 223 aa9.31□□□□□ -0.92
RPUSD3-208ENST00000433972 LOC107984640A0A0U1RRK4 108 aa9.3□□□□□ -0.92
RPUSD3-208ENST00000433972 PMCHL1Q16048 86 aa9.3□□□□□ -0.92
RPUSD3-208ENST00000433972 C6orf226Q5I0X4 101 aa9.3□□□□□ -0.92
RPUSD3-208ENST00000433972 LINC00469Q8N7U9 141 aa9.3□□□□□ -0.92
RPUSD3-208ENST00000433972 RNF151Q2KHN1 245 aa9.29□□□□□ -0.92
RPUSD3-208ENST00000433972 PDZD11Q5EBL8 140 aa9.29□□□□□ -0.92
RPUSD3-208ENST00000433972 A0A096LNJ9 63 aa9.28□□□□□ -0.92
RPUSD3-208ENST00000433972 H3BRM9 83 aa9.28□□□□□ -0.92
RPUSD3-208ENST00000433972 PTTG1IPP53801 180 aa9.28□□□□□ -0.92
RPUSD3-208ENST00000433972 CKS1BP61024 79 aa9.28□□□□□ -0.92
RPUSD3-208ENST00000433972 MRPL35Q9NZE8 188 aaKnown RBP9.28□□□□□ -0.92
RPUSD3-208ENST00000433972 TOMM7Q9P0U1 55 aa9.28□□□□□ -0.92
RPUSD3-208ENST00000433972 CDKN2A-AS1Q9UH64 79 aa9.28□□□□□ -0.92
RPUSD3-208ENST00000433972 SCO1O75880 301 aa9.27□□□□□ -0.93
RPUSD3-208ENST00000433972 S100A1P23297 94 aa9.26□□□□□ -0.93
RPUSD3-208ENST00000433972 GAGE2BQ13066 116 aa9.26□□□□□ -0.93
RPUSD3-208ENST00000433972 TRBV30A0A0K0K1B3 111 aa9.25□□□□□ -0.93
RPUSD3-208ENST00000433972 KIAA0087Q14695 138 aa9.25□□□□□ -0.93
RPUSD3-208ENST00000433972 UNQ6190/PRO20217Q6UXQ8 127 aa9.25□□□□□ -0.93
RPUSD3-208ENST00000433972 Q8IZM0 81 aa9.25□□□□□ -0.93
RPUSD3-208ENST00000433972 IFI27L1Q96BM0 104 aa9.25□□□□□ -0.93
RPUSD3-208ENST00000433972 TNXBP22105 4242 aa9.25□□□□□ -0.93
RPUSD3-208ENST00000433972 IGLV5-45A0A087WSX0 123 aa9.24□□□□□ -0.93
RPUSD3-208ENST00000433972 CXCL5P42830 114 aa9.24□□□□□ -0.93
RPUSD3-208ENST00000433972 FAM19A2Q8N3H0 131 aa9.24□□□□□ -0.93
RPUSD3-208ENST00000433972 SERF1AO75920 110 aa9.23□□□□□ -0.93
RPUSD3-208ENST00000433972 LEPROTL1O95214 131 aa9.23□□□□□ -0.93
RPUSD3-208ENST00000433972 IGLC3P0DOY3 106 aa9.23□□□□□ -0.93
RPUSD3-208ENST00000433972 RPL18AQ02543 176 aaKnown RBP9.23□□□□□ -0.93
RPUSD3-208ENST00000433972 CHTOPQ9Y3Y2 248 aaKnown RBP9.23□□□□□ -0.93
RPUSD3-208ENST00000433972 TRAV12-1A0A0B4J245 112 aa9.22□□□□□ -0.93
RPUSD3-208ENST00000433972 SRSF9Q13242 221 aaKnown RBP eCLIP9.22□□□□□ -0.93
RPUSD3-208ENST00000433972 COX7B2Q8TF08 81 aa9.22□□□□□ -0.93
RPUSD3-208ENST00000433972 HSPB8Q9UJY1 196 aa9.22□□□□□ -0.93
RPUSD3-208ENST00000433972 SMIM1B2RUZ4 78 aa9.21□□□□□ -0.94
RPUSD3-208ENST00000433972 KRTAP10-8P60410 259 aa9.21□□□□□ -0.94
RPUSD3-208ENST00000433972 C10orf25Q5T742 122 aa9.21□□□□□ -0.94
RPUSD3-208ENST00000433972 C2orf82Q6UX34 121 aa9.21□□□□□ -0.94
RPUSD3-208ENST00000433972 C6orf48Q9UBA6 75 aa9.21□□□□□ -0.94
RPUSD3-208ENST00000433972 F8VRH5 84 aa9.2□□□□□ -0.94
RPUSD3-208ENST00000433972 SPINK8P0C7L1 97 aa9.2□□□□□ -0.94
RPUSD3-208ENST00000433972 TLX1NBP0CAT3 122 aa9.2□□□□□ -0.94
RPUSD3-208ENST00000433972 C9orf116Q5BN46 136 aaPredicted RBP9.2□□□□□ -0.94
RPUSD3-208ENST00000433972 TMEM170BQ5T4T1 132 aa9.2□□□□□ -0.94
RPUSD3-208ENST00000433972 A0A1W2PNN7 141 aa9.18□□□□□ -0.94
RPUSD3-208ENST00000433972 HIST1H2BKO60814 126 aa9.18□□□□□ -0.94
RPUSD3-208ENST00000433972 HIST1H2BJP06899 126 aa9.18□□□□□ -0.94
RPUSD3-208ENST00000433972 ZNF22P17026 224 aaPredicted RBP9.18□□□□□ -0.94
RPUSD3-208ENST00000433972 HIST1H2BOP23527 126 aa9.18□□□□□ -0.94
RPUSD3-208ENST00000433972 HIST1H2BBP33778 126 aa9.18□□□□□ -0.94
RPUSD3-208ENST00000433972 HIST1H2BDP58876 126 aa9.18□□□□□ -0.94
RPUSD3-208ENST00000433972 HIST1H2BCP62807 126 aa9.18□□□□□ -0.94
RPUSD3-208ENST00000433972 HIST2H2BEQ16778 126 aa9.18□□□□□ -0.94
RPUSD3-208ENST00000433972 GAGE2EQ4V326 116 aa9.18□□□□□ -0.94
RPUSD3-208ENST00000433972 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.18□□□□□ -0.94
RPUSD3-208ENST00000433972 HIST1H2BHQ93079 126 aa9.18□□□□□ -0.94
RPUSD3-208ENST00000433972 HIST1H2BNQ99877 126 aa9.18□□□□□ -0.94
RPUSD3-208ENST00000433972 HIST1H2BMQ99879 126 aa9.18□□□□□ -0.94
RPUSD3-208ENST00000433972 GAGE2DQ9UEU5 116 aa9.18□□□□□ -0.94
RPUSD3-208ENST00000433972 LRP2P98164 4655 aa9.17□□□□□ -0.94
RPUSD3-208ENST00000433972 C11orf86A6NJI1 115 aa9.17□□□□□ -0.94
RPUSD3-208ENST00000433972 NDUFC2-KCTD14E9PQ53 114 aa9.17□□□□□ -0.94
RPUSD3-208ENST00000433972 H0Y8G0 127 aa9.17□□□□□ -0.94
RPUSD3-208ENST00000433972 FABP4P15090 132 aa9.17□□□□□ -0.94
RPUSD3-208ENST00000433972 PSORS1C2Q9UIG4 136 aa9.17□□□□□ -0.94
RPUSD3-208ENST00000433972 NUPR1O60356 82 aa9.15□□□□□ -0.94
RPUSD3-208ENST00000433972 ATP6V1G1O75348 118 aa9.15□□□□□ -0.94
RPUSD3-208ENST00000433972 LINC00310P59036 64 aa9.15□□□□□ -0.94
RPUSD3-208ENST00000433972 C1orf137Q5JT78 98 aa9.15□□□□□ -0.94
RPUSD3-208ENST00000433972 SFTA2Q6UW10 78 aa9.15□□□□□ -0.94
RPUSD3-208ENST00000433972 MAP1LC3CQ9BXW4 147 aa9.15□□□□□ -0.94
RPUSD3-208ENST00000433972 IGLV5-39A0A0G2JS06 123 aa9.14□□□□□ -0.95
RPUSD3-208ENST00000433972 DIRC1Q969H9 104 aa9.14□□□□□ -0.95
RPUSD3-208ENST00000433972 PLNP26678 52 aa9.12□□□□□ -0.95
RPUSD3-208ENST00000433972 PHF5AQ7RTV0 110 aaKnown RBP9.12□□□□□ -0.95
RPUSD3-208ENST00000433972 TMEM223A0PJW6 202 aa9.11□□□□□ -0.95
RPUSD3-208ENST00000433972 ODF1Q14990 250 aa9.11□□□□□ -0.95
RPUSD3-208ENST00000433972 DPM2O94777 84 aa9.1□□□□□ -0.95
RPUSD3-208ENST00000433972 IGLV7-43P04211 117 aa9.1□□□□□ -0.95
RPUSD3-208ENST00000433972 RNF213Q63HN8 5207 aa9.1□□□□□ -0.95
RPUSD3-208ENST00000433972 HERVK_113P61574 105 aa9.08□□□□□ -0.96
RPUSD3-208ENST00000433972 COX17Q14061 63 aa9.08□□□□□ -0.96
RPUSD3-208ENST00000433972 COA6Q5JTJ3 125 aaKnown RBP9.08□□□□□ -0.96
RPUSD3-208ENST00000433972 FAM19A5Q7Z5A7 132 aaPredicted RBP9.08□□□□□ -0.96
RPUSD3-208ENST00000433972 IGKCP01834 107 aa9.07□□□□□ -0.96
RPUSD3-208ENST00000433972 PFN2P35080 140 aa9.07□□□□□ -0.96
RPUSD3-208ENST00000433972 UBE2BP63146 152 aa9.07□□□□□ -0.96
RPUSD3-208ENST00000433972 XAGE1AQ9HD64 81 aa9.07□□□□□ -0.96
RPUSD3-208ENST00000433972 ERG28Q9UKR5 140 aa9.07□□□□□ -0.96
RPUSD3-208ENST00000433972 FAM168BA1KXE4 195 aa9.06□□□□□ -0.96
RPUSD3-208ENST00000433972 LINC00587B1AMM8 73 aa9.06□□□□□ -0.96
RPUSD3-208ENST00000433972 H0Y9J4 135 aa9.06□□□□□ -0.96
RPUSD3-208ENST00000433972 SYS1-DBNDD2H3BUS1 97 aa9.06□□□□□ -0.96
RPUSD3-208ENST00000433972 LBHQ53QV2 105 aaPredicted RBP9.06□□□□□ -0.96
RPUSD3-208ENST00000433972 C9orf129Q5T035 196 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms