RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 NUPR1O60356 82 aa9.93□□□□□ -0.82
TREX1-201ENST00000433541 MRPL35Q9NZE8 188 aaKnown RBP9.93□□□□□ -0.82
TREX1-201ENST00000433541 LINC00474Q9P2X8 69 aa9.93□□□□□ -0.82
TREX1-201ENST00000433541 IGLV5-45A0A087WSX0 123 aa9.92□□□□□ -0.82
TREX1-201ENST00000433541 PANO1I0J062 215 aa9.92□□□□□ -0.82
TREX1-201ENST00000433541 KIAA0087Q14695 138 aa9.92□□□□□ -0.82
TREX1-201ENST00000433541 C10orf25Q5T742 122 aa9.92□□□□□ -0.82
TREX1-201ENST00000433541 SPACA4Q8TDM5 124 aa9.92□□□□□ -0.82
TREX1-201ENST00000433541 COX7B2Q8TF08 81 aa9.92□□□□□ -0.82
TREX1-201ENST00000433541 APOBP04114 4563 aaKnown RBP9.92□□□□□ -0.82
TREX1-201ENST00000433541 TRAV12-1A0A0B4J245 112 aa9.91□□□□□ -0.82
TREX1-201ENST00000433541 C11orf86A6NJI1 115 aa9.91□□□□□ -0.82
TREX1-201ENST00000433541 ZNF22P17026 224 aaPredicted RBP9.91□□□□□ -0.82
TREX1-201ENST00000433541 RNF151Q2KHN1 245 aa9.91□□□□□ -0.82
TREX1-201ENST00000433541 Q5VSD8 79 aa9.91□□□□□ -0.82
TREX1-201ENST00000433541 LINC00528Q8N1L1 170 aa9.91□□□□□ -0.82
TREX1-201ENST00000433541 C6orf48Q9UBA6 75 aa9.91□□□□□ -0.82
TREX1-201ENST00000433541 HERC2O95714 4834 aa9.9□□□□□ -0.82
TREX1-201ENST00000433541 A0A087WYN8 130 aa9.9□□□□□ -0.82
TREX1-201ENST00000433541 TRBV30A0A0K0K1B3 111 aa9.9□□□□□ -0.82
TREX1-201ENST00000433541 CXCL5P42830 114 aa9.9□□□□□ -0.82
TREX1-201ENST00000433541 STPG4Q8N801 248 aa9.9□□□□□ -0.82
TREX1-201ENST00000433541 F8VRH5 84 aa9.89□□□□□ -0.83
TREX1-201ENST00000433541 PTTG1IPP53801 180 aa9.89□□□□□ -0.83
TREX1-201ENST00000433541 MAP1LC3CQ9BXW4 147 aa9.89□□□□□ -0.83
TREX1-201ENST00000433541 HSPG2P98160 4391 aa9.89□□□□□ -0.83
TREX1-201ENST00000433541 CIRBPQ14011 172 aaKnown RBP9.88□□□□□ -0.83
TREX1-201ENST00000433541 GAGE2EQ4V326 116 aa9.88□□□□□ -0.83
TREX1-201ENST00000433541 GAGE2DQ9UEU5 116 aa9.88□□□□□ -0.83
TREX1-201ENST00000433541 C9orf116Q5BN46 136 aaPredicted RBP9.87□□□□□ -0.83
TREX1-201ENST00000433541 PLA2G1BP04054 148 aaKnown RBP9.86□□□□□ -0.83
TREX1-201ENST00000433541 PLNP26678 52 aa9.85□□□□□ -0.83
TREX1-201ENST00000433541 ODF1Q14990 250 aa9.85□□□□□ -0.83
TREX1-201ENST00000433541 PMCHL2Q9BQD1 86 aa9.85□□□□□ -0.83
TREX1-201ENST00000433541 NDUFC2-KCTD14E9PQ53 114 aa9.84□□□□□ -0.83
TREX1-201ENST00000433541 Q6ZRP5 223 aa9.84□□□□□ -0.83
TREX1-201ENST00000433541 C7orf33Q8WU49 177 aa9.84□□□□□ -0.83
TREX1-201ENST00000433541 DPM2O94777 84 aa9.83□□□□□ -0.84
TREX1-201ENST00000433541 TLX1NBP0CAT3 122 aa9.83□□□□□ -0.84
TREX1-201ENST00000433541 KRTAP17-1Q9BYP8 105 aa9.83□□□□□ -0.84
TREX1-201ENST00000433541 KRTAP4-5Q9BYR2 181 aa9.83□□□□□ -0.84
TREX1-201ENST00000433541 PLAC8Q9NZF1 115 aa9.83□□□□□ -0.84
TREX1-201ENST00000433541 IGLV5-39A0A0G2JS06 123 aa9.82□□□□□ -0.84
TREX1-201ENST00000433541 TMEM223A0PJW6 202 aa9.82□□□□□ -0.84
TREX1-201ENST00000433541 RPL37AP61513 92 aaKnown RBP9.82□□□□□ -0.84
TREX1-201ENST00000433541 DNAH8Q96JB1 4490 aa9.81□□□□□ -0.84
TREX1-201ENST00000433541 IGKCP01834 107 aa9.81□□□□□ -0.84
TREX1-201ENST00000433541 S100A6P06703 90 aa9.81□□□□□ -0.84
TREX1-201ENST00000433541 HERVK_113P61574 105 aa9.81□□□□□ -0.84
TREX1-201ENST00000433541 KRTDAPP60985 99 aa9.8□□□□□ -0.84
TREX1-201ENST00000433541 COA6Q5JTJ3 125 aaKnown RBP9.8□□□□□ -0.84
TREX1-201ENST00000433541 FAM19A5Q7Z5A7 132 aaPredicted RBP9.8□□□□□ -0.84
TREX1-201ENST00000433541 ZNF625Q96I27 306 aaPredicted RBP9.8□□□□□ -0.84
TREX1-201ENST00000433541 SYS1-DBNDD2H3BUS1 97 aa9.79□□□□□ -0.84
TREX1-201ENST00000433541 PFN2P35080 140 aa9.79□□□□□ -0.84
TREX1-201ENST00000433541 SFTA2Q6UW10 78 aa9.79□□□□□ -0.84
TREX1-201ENST00000433541 S100A2P29034 98 aa9.78□□□□□ -0.84
TREX1-201ENST00000433541 XAGE1AQ9HD64 81 aa9.78□□□□□ -0.84
TREX1-201ENST00000433541 A0A1W2PNN7 141 aa9.77□□□□□ -0.85
TREX1-201ENST00000433541 FAM168BA1KXE4 195 aa9.77□□□□□ -0.85
TREX1-201ENST00000433541 INAFM2P0DMQ5 153 aa9.77□□□□□ -0.85
TREX1-201ENST00000433541 PET117Q6UWS5 81 aa9.76□□□□□ -0.85
TREX1-201ENST00000433541 ERG28Q9UKR5 140 aa9.76□□□□□ -0.85
TREX1-201ENST00000433541 C20orf202A1L168 122 aa9.75□□□□□ -0.85
TREX1-201ENST00000433541 C3orf79P0CE67 100 aa9.75□□□□□ -0.85
TREX1-201ENST00000433541 MEIG1Q5JSS6 88 aa9.75□□□□□ -0.85
TREX1-201ENST00000433541 PLEKHB2Q96CS7 222 aa9.75□□□□□ -0.85
TREX1-201ENST00000433541 SRRM2Q9UQ35 2752 aaKnown RBP9.74□□□□□ -0.85
TREX1-201ENST00000433541 M0QXV9 152 aa9.74□□□□□ -0.85
TREX1-201ENST00000433541 LGALS3P17931 250 aaKnown RBP9.74□□□□□ -0.85
TREX1-201ENST00000433541 LINC00158P58513 81 aa9.74□□□□□ -0.85
TREX1-201ENST00000433541 C9orf129Q5T035 196 aaKnown RBP9.74□□□□□ -0.85
TREX1-201ENST00000433541 PHF5AQ7RTV0 110 aaKnown RBP9.74□□□□□ -0.85
TREX1-201ENST00000433541 PCLOQ9Y6V0 5065 aa9.74□□□□□ -0.85
TREX1-201ENST00000433541 A0A0U1RRA0 63 aa9.73□□□□□ -0.85
TREX1-201ENST00000433541 MYMXA0A1B0GTQ4 84 aa9.73□□□□□ -0.85
TREX1-201ENST00000433541 LEPROTO15243 131 aa9.73□□□□□ -0.85
TREX1-201ENST00000433541 NDUFA12Q9UI09 145 aa9.73□□□□□ -0.85
TREX1-201ENST00000433541 UBE2BP63146 152 aa9.72□□□□□ -0.85
TREX1-201ENST00000433541 LINC01545Q5VT33 79 aa9.72□□□□□ -0.85
TREX1-201ENST00000433541 ABCA13Q86UQ4 5058 aa9.71□□□□□ -0.85
TREX1-201ENST00000433541 J3QQQ9 107 aa9.71□□□□□ -0.86
TREX1-201ENST00000433541 HERV-K104P63124 156 aa9.71□□□□□ -0.86
TREX1-201ENST00000433541 COX17Q14061 63 aa9.71□□□□□ -0.86
TREX1-201ENST00000433541 HIST3H2BBQ8N257 126 aa9.7□□□□□ -0.86
TREX1-201ENST00000433541 TSPEAR-AS2P59090 65 aa9.69□□□□□ -0.86
TREX1-201ENST00000433541 SERTAD4-AS1Q5TG53 156 aa9.69□□□□□ -0.86
TREX1-201ENST00000433541 NKAPP1Q8N9T2 125 aa9.69□□□□□ -0.86
TREX1-201ENST00000433541 FAT1Q14517 4588 aa9.68□□□□□ -0.86
TREX1-201ENST00000433541 LINC00587B1AMM8 73 aa9.68□□□□□ -0.86
TREX1-201ENST00000433541 SMIM13P0DJ93 91 aa9.68□□□□□ -0.86
TREX1-201ENST00000433541 SNRPEP62304 92 aaKnown RBP9.68□□□□□ -0.86
TREX1-201ENST00000433541 PRR3P79522 188 aaKnown RBP9.68□□□□□ -0.86
TREX1-201ENST00000433541 VPS13BQ7Z7G8 4022 aa9.67□□□□□ -0.86
TREX1-201ENST00000433541 NMUP48645 174 aa9.67□□□□□ -0.86
TREX1-201ENST00000433541 HIST1H2BLQ99880 126 aa9.67□□□□□ -0.86
TREX1-201ENST00000433541 SND1-IT1Q9HBX3 110 aa9.67□□□□□ -0.86
TREX1-201ENST00000433541 E9PLD3 99 aa9.66□□□□□ -0.86
TREX1-201ENST00000433541 AKR1D1P51857 326 aa9.66□□□□□ -0.86
TREX1-201ENST00000433541 LBHQ53QV2 105 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms