RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 NRACQ8N912 160 aa8.68□□□□□ -1.02
NUP50-209ENST00000432340 ARPC5O15511 151 aa8.67□□□□□ -1.02
NUP50-209ENST00000432340 FAM104AQ969W3 186 aa8.67□□□□□ -1.02
NUP50-209ENST00000432340 C2orf88Q9BSF0 95 aa8.67□□□□□ -1.02
NUP50-209ENST00000432340 IGKV2-28A0A075B6P5 120 aa8.66□□□□□ -1.02
NUP50-209ENST00000432340 IGKV2D-28P01615 120 aa8.66□□□□□ -1.02
NUP50-209ENST00000432340 GEMIN7Q9H840 131 aaKnown RBP8.66□□□□□ -1.02
NUP50-209ENST00000432340 SMKR1H3BMG3 65 aa8.65□□□□□ -1.02
NUP50-209ENST00000432340 RGS21Q2M5E4 152 aa8.65□□□□□ -1.02
NUP50-209ENST00000432340 LINC00862A6NCI5 91 aa8.64□□□□□ -1.03
NUP50-209ENST00000432340 TAGLN2P37802 199 aaKnown RBP8.64□□□□□ -1.03
NUP50-209ENST00000432340 TEX43Q6ZNM6 134 aa8.64□□□□□ -1.03
NUP50-209ENST00000432340 FAM231DQ6ZW35 169 aa8.64□□□□□ -1.03
NUP50-209ENST00000432340 OCC1Q8TAD7 63 aa8.64□□□□□ -1.03
NUP50-209ENST00000432340 SPRR4Q96PI1 79 aa8.64□□□□□ -1.03
NUP50-209ENST00000432340 HIGD2AQ9BW72 106 aa8.64□□□□□ -1.03
NUP50-209ENST00000432340 TMEM126AQ9H061 195 aa8.64□□□□□ -1.03
NUP50-209ENST00000432340 PYGO1Q9Y3Y4 419 aa8.64□□□□□ -1.03
NUP50-209ENST00000432340 HIGD1CA8MV81 97 aa8.63□□□□□ -1.03
NUP50-209ENST00000432340 K7EN84 100 aa8.63□□□□□ -1.03
NUP50-209ENST00000432340 RIGQ13278 110 aa8.63□□□□□ -1.03
NUP50-209ENST00000432340 TMEM141Q96I45 108 aa8.63□□□□□ -1.03
NUP50-209ENST00000432340 LINC01551Q86U37 167 aa8.62□□□□□ -1.03
NUP50-209ENST00000432340 TRBV24-1A0A075B6N3 115 aa8.61□□□□□ -1.03
NUP50-209ENST00000432340 Q8N377 158 aa8.61□□□□□ -1.03
NUP50-209ENST00000432340 RAB5AP20339 215 aa8.6□□□□□ -1.03
NUP50-209ENST00000432340 SEC11AP67812 179 aa8.6□□□□□ -1.03
NUP50-209ENST00000432340 ZNF345Q14585 488 aa8.6□□□□□ -1.03
NUP50-209ENST00000432340 SMIM2Q9BVW6 85 aa8.6□□□□□ -1.03
NUP50-209ENST00000432340 IGLV4-3A0A075B6K6 122 aa8.58□□□□□ -1.04
NUP50-209ENST00000432340 CKS2P33552 79 aa8.58□□□□□ -1.04
NUP50-209ENST00000432340 KANTRA0A1W2PQU2 76 aa8.57□□□□□ -1.04
NUP50-209ENST00000432340 HMSDA8MTL9 139 aa8.57□□□□□ -1.04
NUP50-209ENST00000432340 TMEM238C9JI98 176 aa8.57□□□□□ -1.04
NUP50-209ENST00000432340 EIF5A2Q9GZV4 153 aaKnown RBP8.57□□□□□ -1.04
NUP50-209ENST00000432340 M0R378 163 aa8.56□□□□□ -1.04
NUP50-209ENST00000432340 HERVK_113P63121 156 aa8.56□□□□□ -1.04
NUP50-209ENST00000432340 FAM104BQ5XKR9 115 aa8.56□□□□□ -1.04
NUP50-209ENST00000432340 VCX2Q9H322 139 aa8.56□□□□□ -1.04
NUP50-209ENST00000432340 SMLR1H3BR10 107 aa8.55□□□□□ -1.04
NUP50-209ENST00000432340 RPL24P83731 157 aaKnown RBP8.55□□□□□ -1.04
NUP50-209ENST00000432340 MRPL51Q4U2R6 128 aaKnown RBP8.55□□□□□ -1.04
NUP50-209ENST00000432340 SSBP3-AS1Q7Z2R9 100 aa8.55□□□□□ -1.04
NUP50-209ENST00000432340 SSPOA2VEC9 5147 aa8.55□□□□□ -1.04
NUP50-209ENST00000432340 SYNE2Q8WXH0 6885 aaKnown RBP8.54□□□□□ -1.04
NUP50-209ENST00000432340 FCGBPQ9Y6R7 5405 aaPredicted RBP8.53□□□□□ -1.04
NUP50-209ENST00000432340 LINC00846Q9NV44 126 aa8.53□□□□□ -1.04
NUP50-209ENST00000432340 USH2AO75445 5202 aa8.53□□□□□ -1.04
NUP50-209ENST00000432340 NPSP0C0P6 89 aa8.51□□□□□ -1.05
NUP50-209ENST00000432340 PAPPA-AS1Q5QFB9 102 aa8.51□□□□□ -1.05
NUP50-209ENST00000432340 A0A1B0GW15 77 aa8.5□□□□□ -1.05
NUP50-209ENST00000432340 SCO1O75880 301 aa8.5□□□□□ -1.05
NUP50-209ENST00000432340 PPBPP02775 128 aa8.5□□□□□ -1.05
NUP50-209ENST00000432340 RAB5BP61020 215 aa8.5□□□□□ -1.05
NUP50-209ENST00000432340 FAM19A3Q7Z5A8 133 aa8.5□□□□□ -1.05
NUP50-209ENST00000432340 AKAP14Q86UN6 197 aa8.5□□□□□ -1.05
NUP50-209ENST00000432340 KRTAP4-16G5E9R7 235 aaPredicted RBP8.49□□□□□ -1.05
NUP50-209ENST00000432340 TMEM250H0YL14 139 aa8.49□□□□□ -1.05
NUP50-209ENST00000432340 AMELXQ99217 191 aa8.49□□□□□ -1.05
NUP50-209ENST00000432340 CDKN2A-AS1Q9UH64 79 aa8.49□□□□□ -1.05
NUP50-209ENST00000432340 NAT8BQ9UHF3 227 aa8.49□□□□□ -1.05
NUP50-209ENST00000432340 MACF1Q9UPN3 7388 aaKnown RBP8.48□□□□□ -1.05
NUP50-209ENST00000432340 ATP5LO75964 103 aa8.48□□□□□ -1.05
NUP50-209ENST00000432340 MOBPQ13875 183 aa8.48□□□□□ -1.05
NUP50-209ENST00000432340 PDZD11Q5EBL8 140 aa8.48□□□□□ -1.05
NUP50-209ENST00000432340 C2orf66Q6UXQ4 117 aa8.48□□□□□ -1.05
NUP50-209ENST00000432340 COX7B2Q8TF08 81 aa8.48□□□□□ -1.05
NUP50-209ENST00000432340 OSTCQ9NRP0 149 aa8.48□□□□□ -1.05
NUP50-209ENST00000432340 CYSLTR1Q9Y271 337 aa8.48□□□□□ -1.05
NUP50-209ENST00000432340 D6R8Y8 96 aa8.47□□□□□ -1.05
NUP50-209ENST00000432340 F8W036 122 aa8.47□□□□□ -1.05
NUP50-209ENST00000432340 S100A8P05109 93 aa8.47□□□□□ -1.05
NUP50-209ENST00000432340 VPREB1P12018 145 aa8.47□□□□□ -1.05
NUP50-209ENST00000432340 LINC00483Q53H64 154 aa8.47□□□□□ -1.05
NUP50-209ENST00000432340 KRTAP19-1Q8IUB9 90 aa8.47□□□□□ -1.05
NUP50-209ENST00000432340 IGLV9-49A0A0B4J1Y8 123 aa8.45□□□□□ -1.06
NUP50-209ENST00000432340 NPYP01303 97 aa8.44□□□□□ -1.06
NUP50-209ENST00000432340 TCTE3Q8IZS6 198 aa8.43□□□□□ -1.06
NUP50-209ENST00000432340 C9orf92A6NGG3 77 aa8.42□□□□□ -1.06
NUP50-209ENST00000432340 SMIM1B2RUZ4 78 aa8.42□□□□□ -1.06
NUP50-209ENST00000432340 GAGE2AQ6NT46 116 aa8.42□□□□□ -1.06
NUP50-209ENST00000432340 ORMDL3Q8N138 153 aa8.42□□□□□ -1.06
NUP50-209ENST00000432340 SMCR5Q8TEV8 140 aa8.42□□□□□ -1.06
NUP50-209ENST00000432340 LIMD2Q9BT23 127 aa8.42□□□□□ -1.06
NUP50-209ENST00000432340 ZC2HC1BQ5TFG8 222 aa8.41□□□□□ -1.06
NUP50-209ENST00000432340 G0S2P27469 103 aa8.4□□□□□ -1.06
NUP50-209ENST00000432340 PFN2P35080 140 aa8.4□□□□□ -1.06
NUP50-209ENST00000432340 CEBPGP53567 150 aa8.4□□□□□ -1.06
NUP50-209ENST00000432340 RAB14P61106 215 aa8.4□□□□□ -1.06
NUP50-209ENST00000432340 SND1-IT1Q9HBX3 110 aa8.4□□□□□ -1.06
NUP50-209ENST00000432340 FAM74A3Q4VXF1 159 aa8.39□□□□□ -1.07
NUP50-209ENST00000432340 ORMDL2Q53FV1 153 aa8.39□□□□□ -1.07
NUP50-209ENST00000432340 SLC51BQ86UW2 128 aa8.39□□□□□ -1.07
NUP50-209ENST00000432340 TIMM17AQ99595 171 aa8.39□□□□□ -1.07
NUP50-209ENST00000432340 SMIM7Q9BQ49 75 aa8.39□□□□□ -1.07
NUP50-209ENST00000432340 V9GYV3 84 aa8.39□□□□□ -1.07
NUP50-209ENST00000432340 IGLV6-57P01721 117 aa8.38□□□□□ -1.07
NUP50-209ENST00000432340 COX17Q14061 63 aa8.38□□□□□ -1.07
NUP50-209ENST00000432340 LOC389332A0A1B0GUA5 103 aa8.37□□□□□ -1.07
NUP50-209ENST00000432340 IGIPA6NJ69 53 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms