RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 CRYGAP11844 174 aa4.91□□□□□ -1.62
CDH13-203ENST00000431540 RPL39P62891 51 aaKnown RBP4.91□□□□□ -1.62
CDH13-203ENST00000431540 RNASE13Q5GAN3 156 aaKnown RBP4.91□□□□□ -1.62
CDH13-203ENST00000431540 PAPPA-AS1Q5QFB9 102 aa4.91□□□□□ -1.62
CDH13-203ENST00000431540 ATP5L2Q7Z4Y8 100 aa4.91□□□□□ -1.62
CDH13-203ENST00000431540 FAM19A5Q7Z5A7 132 aaPredicted RBP4.91□□□□□ -1.62
CDH13-203ENST00000431540 KRTAP11-1Q8IUC1 163 aa4.91□□□□□ -1.62
CDH13-203ENST00000431540 Q8IZM0 81 aa4.91□□□□□ -1.62
CDH13-203ENST00000431540 C2orf88Q9BSF0 95 aa4.91□□□□□ -1.62
CDH13-203ENST00000431540 LINC01549A6NIU2 74 aa4.9□□□□□ -1.63
CDH13-203ENST00000431540 CXCL5P42830 114 aa4.9□□□□□ -1.63
CDH13-203ENST00000431540 CKS1BP61024 79 aa4.9□□□□□ -1.63
CDH13-203ENST00000431540 RPL23P62829 140 aaKnown RBP4.9□□□□□ -1.63
CDH13-203ENST00000431540 FAM229BQ4G0N7 80 aa4.9□□□□□ -1.63
CDH13-203ENST00000431540 C6orf226Q5I0X4 101 aa4.9□□□□□ -1.63
CDH13-203ENST00000431540 C9orf129Q5T035 196 aaKnown RBP4.9□□□□□ -1.63
CDH13-203ENST00000431540 TEX43Q6ZNM6 134 aa4.9□□□□□ -1.63
CDH13-203ENST00000431540 ORMDL3Q8N138 153 aa4.9□□□□□ -1.63
CDH13-203ENST00000431540 AMELXQ99217 191 aa4.9□□□□□ -1.63
CDH13-203ENST00000431540 NAT8Q9UHE5 227 aa4.9□□□□□ -1.63
CDH13-203ENST00000431540 C22orf24Q9Y442 160 aa4.9□□□□□ -1.63
CDH13-203ENST00000431540 MUC2Q02817 5179 aa4.89□□□□□ -1.63
CDH13-203ENST00000431540 IGLV4-3A0A075B6K6 122 aa4.89□□□□□ -1.63
CDH13-203ENST00000431540 A0A1B0GXF2 115 aa4.89□□□□□ -1.63
CDH13-203ENST00000431540 D6R8Y8 96 aa4.89□□□□□ -1.63
CDH13-203ENST00000431540 PRSS2P07478 247 aa4.89□□□□□ -1.63
CDH13-203ENST00000431540 CEBPGP53567 150 aa4.89□□□□□ -1.63
CDH13-203ENST00000431540 ALKAL2Q6UX46 152 aa4.89□□□□□ -1.63
CDH13-203ENST00000431540 BCE1O60756 84 aa4.88□□□□□ -1.63
CDH13-203ENST00000431540 HERVK_113P63121 156 aa4.88□□□□□ -1.63
CDH13-203ENST00000431540 TPRXLQ17RH7 258 aa4.88□□□□□ -1.63
CDH13-203ENST00000431540 ORMDL2Q53FV1 153 aa4.88□□□□□ -1.63
CDH13-203ENST00000431540 C2orf66Q6UXQ4 117 aa4.88□□□□□ -1.63
CDH13-203ENST00000431540 TMEM136Q6ZRR5 245 aa4.88□□□□□ -1.63
CDH13-203ENST00000431540 TYMSOSQ8TAI1 123 aa4.88□□□□□ -1.63
CDH13-203ENST00000431540 VCX2Q9H322 139 aa4.88□□□□□ -1.63
CDH13-203ENST00000431540 F8VRH5 84 aa4.87□□□□□ -1.63
CDH13-203ENST00000431540 NPYP01303 97 aa4.87□□□□□ -1.63
CDH13-203ENST00000431540 PEA15Q15121 130 aa4.87□□□□□ -1.63
CDH13-203ENST00000431540 KRTAP5-11Q6L8G4 156 aa4.87□□□□□ -1.63
CDH13-203ENST00000431540 MRPL55Q7Z7F7 128 aaKnown RBP4.87□□□□□ -1.63
CDH13-203ENST00000431540 PRELID3AQ96N28 172 aa4.87□□□□□ -1.63
CDH13-203ENST00000431540 CTDSP1Q9GZU7 261 aa4.87□□□□□ -1.63
CDH13-203ENST00000431540 CYSLTR1Q9Y271 337 aa4.87□□□□□ -1.63
CDH13-203ENST00000431540 IGLV5-37A0A075B6J1 123 aa4.86□□□□□ -1.63
CDH13-203ENST00000431540 C2orf82Q6UX34 121 aa4.86□□□□□ -1.63
CDH13-203ENST00000431540 Q8N8P6 123 aa4.86□□□□□ -1.63
CDH13-203ENST00000431540 ALKBH7Q9BT30 221 aaPredicted RBP4.86□□□□□ -1.63
CDH13-203ENST00000431540 IGIPA6NJ69 53 aa4.85□□□□□ -1.63
CDH13-203ENST00000431540 ADIRFQ15847 76 aa4.85□□□□□ -1.63
CDH13-203ENST00000431540 SPAG11AQ6PDA7 123 aa4.85□□□□□ -1.63
CDH13-203ENST00000431540 AKAP14Q86UN6 197 aa4.85□□□□□ -1.63
CDH13-203ENST00000431540 TIMM17AQ99595 171 aa4.85□□□□□ -1.63
CDH13-203ENST00000431540 MAP1LC3AQ9H492 121 aa4.85□□□□□ -1.63
CDH13-203ENST00000431540 NXT2Q9NPJ8 142 aaKnown RBP4.85□□□□□ -1.63
CDH13-203ENST00000431540 PDZD11Q5EBL8 140 aa4.84□□□□□ -1.63
CDH13-203ENST00000431540 GNB1LQ9BYB4 327 aa4.84□□□□□ -1.63
CDH13-203ENST00000431540 A0A087X002 238 aa4.83□□□□□ -1.64
CDH13-203ENST00000431540 TSPAN13O95857 204 aa4.83□□□□□ -1.64
CDH13-203ENST00000431540 LINC00173Q6ZV60 143 aa4.83□□□□□ -1.64
CDH13-203ENST00000431540 KRTAP13-1Q8IUC0 172 aa4.83□□□□□ -1.64
CDH13-203ENST00000431540 ANAPC16Q96DE5 110 aa4.83□□□□□ -1.64
CDH13-203ENST00000431540 LINC00167Q96N53 147 aa4.83□□□□□ -1.64
CDH13-203ENST00000431540 GEMIN7Q9H840 131 aaKnown RBP4.83□□□□□ -1.64
CDH13-203ENST00000431540 IGLV5-45A0A087WSX0 123 aa4.82□□□□□ -1.64
CDH13-203ENST00000431540 PNRC1Q12796 327 aaPredicted RBP4.82□□□□□ -1.64
CDH13-203ENST00000431540 KRTAP15-1Q3LI76 137 aa4.82□□□□□ -1.64
CDH13-203ENST00000431540 MRPL54Q6P161 138 aaKnown RBP4.82□□□□□ -1.64
CDH13-203ENST00000431540 FP248Q71RG6 208 aaPredicted RBP4.82□□□□□ -1.64
CDH13-203ENST00000431540 ERASQ7Z444 233 aa4.82□□□□□ -1.64
CDH13-203ENST00000431540 LINC00304Q8N9R0 145 aa4.82□□□□□ -1.64
CDH13-203ENST00000431540 CDIP1Q9H305 208 aa4.82□□□□□ -1.64
CDH13-203ENST00000431540 TOMM7Q9P0U1 55 aa4.82□□□□□ -1.64
CDH13-203ENST00000431540 IGKV2D-26A0A0A0MRZ7 120 aa4.81□□□□□ -1.64
CDH13-203ENST00000431540 TINCRA0A1B0GVN0 87 aa4.81□□□□□ -1.64
CDH13-203ENST00000431540 COX17Q14061 63 aa4.81□□□□□ -1.64
CDH13-203ENST00000431540 TOMM6Q96B49 74 aa4.81□□□□□ -1.64
CDH13-203ENST00000431540 XAGE1AQ9HD64 81 aa4.81□□□□□ -1.64
CDH13-203ENST00000431540 CDKN2A-AS1Q9UH64 79 aa4.81□□□□□ -1.64
CDH13-203ENST00000431540 IGLV7-46A0A075B6I9 117 aa4.8□□□□□ -1.64
CDH13-203ENST00000431540 MT-ND4LP03901 98 aa4.8□□□□□ -1.64
CDH13-203ENST00000431540 KRTAP10-7P60409 375 aaPredicted RBP4.8□□□□□ -1.64
CDH13-203ENST00000431540 SFTA2Q6UW10 78 aa4.8□□□□□ -1.64
CDH13-203ENST00000431540 NKAPP1Q8N9T2 125 aa4.8□□□□□ -1.64
CDH13-203ENST00000431540 C9JQL5 133 aa4.79□□□□□ -1.64
CDH13-203ENST00000431540 UBE2AP49459 152 aa4.79□□□□□ -1.64
CDH13-203ENST00000431540 RPL24P83731 157 aaKnown RBP4.79□□□□□ -1.64
CDH13-203ENST00000431540 KRTAP13-2Q52LG2 175 aa4.79□□□□□ -1.64
CDH13-203ENST00000431540 LINC00469Q8N7U9 141 aa4.79□□□□□ -1.64
CDH13-203ENST00000431540 COX7B2Q8TF08 81 aa4.79□□□□□ -1.64
CDH13-203ENST00000431540 FAT4Q6V0I7 4981 aa4.79□□□□□ -1.64
CDH13-203ENST00000431540 LOC389332A0A1B0GUA5 103 aa4.78□□□□□ -1.64
CDH13-203ENST00000431540 LINC01546A6NGU7 62 aa4.78□□□□□ -1.64
CDH13-203ENST00000431540 SMIM1B2RUZ4 78 aa4.78□□□□□ -1.64
CDH13-203ENST00000431540 ANKRD39Q53RE8 183 aa4.78□□□□□ -1.64
CDH13-203ENST00000431540 TRAV9-1A0A075B6T8 112 aa4.77□□□□□ -1.65
CDH13-203ENST00000431540 RPL37AP8A6NKH3 93 aa4.77□□□□□ -1.65
CDH13-203ENST00000431540 H3BRM9 83 aa4.77□□□□□ -1.65
CDH13-203ENST00000431540 ATP5LO75964 103 aa4.77□□□□□ -1.65
CDH13-203ENST00000431540 A0A1B0GVG6 124 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms