RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 KIAA0087Q14695 138 aa12.1□□□□□ -0.47
HMGN1-206ENST00000431390 C6orf226Q5I0X4 101 aa12.1□□□□□ -0.47
HMGN1-206ENST00000431390 CXCL5P42830 114 aa12.09□□□□□ -0.47
HMGN1-206ENST00000431390 CFAP161Q6P656 301 aa12.09□□□□□ -0.47
HMGN1-206ENST00000431390 A0A0J9YXY3 114 aa12.09□□□□□ -0.47
HMGN1-206ENST00000431390 SPAG11BQ08648 103 aa12.09□□□□□ -0.47
HMGN1-206ENST00000431390 KIAA1109Q2LD37 5005 aa12.08□□□□□ -0.48
HMGN1-206ENST00000431390 CTAG1AP78358 180 aa12.07□□□□□ -0.48
HMGN1-206ENST00000431390 C15orf56Q8N910 161 aa12.07□□□□□ -0.48
HMGN1-206ENST00000431390 CKS1BP61024 79 aa12.06□□□□□ -0.48
HMGN1-206ENST00000431390 HECTD4Q9Y4D8 3996 aa12.06□□□□□ -0.48
HMGN1-206ENST00000431390 GVQW2A0A096LPI5 108 aaPredicted RBP12.05□□□□□ -0.48
HMGN1-206ENST00000431390 TIMM17BO60830 172 aa12.05□□□□□ -0.48
HMGN1-206ENST00000431390 Q6ZR54 194 aa12.05□□□□□ -0.48
HMGN1-206ENST00000431390 SPANXB1Q9NS25 103 aaPredicted RBP12.05□□□□□ -0.48
HMGN1-206ENST00000431390 LINC00587B1AMM8 73 aa12.04□□□□□ -0.48
HMGN1-206ENST00000431390 TMEM238C9JI98 176 aa12.04□□□□□ -0.48
HMGN1-206ENST00000431390 ZNF561-AS1K7EIQ3 104 aa12.04□□□□□ -0.48
HMGN1-206ENST00000431390 HSD52Q0P140 79 aa12.04□□□□□ -0.48
HMGN1-206ENST00000431390 TAL2Q16559 108 aa12.04□□□□□ -0.48
HMGN1-206ENST00000431390 NTN5Q8WTR8 489 aaPredicted RBP12.04□□□□□ -0.48
HMGN1-206ENST00000431390 F8WDY8 70 aa12.03□□□□□ -0.48
HMGN1-206ENST00000431390 CIRBPQ14011 172 aaKnown RBP12.03□□□□□ -0.48
HMGN1-206ENST00000431390 PSCAO43653 123 aa12.02□□□□□ -0.49
HMGN1-206ENST00000431390 HIGD2BQ4VC39 106 aa12.02□□□□□ -0.49
HMGN1-206ENST00000431390 C2orf82Q6UX34 121 aa12.02□□□□□ -0.49
HMGN1-206ENST00000431390 C2orf48Q96LS8 159 aa12.02□□□□□ -0.49
HMGN1-206ENST00000431390 LITAFQ99732 161 aa12.02□□□□□ -0.49
HMGN1-206ENST00000431390 USP17L23D6RBM5 183 aa12.01□□□□□ -0.49
HMGN1-206ENST00000431390 M0R2N4 97 aa12.01□□□□□ -0.49
HMGN1-206ENST00000431390 MEIG1Q5JSS6 88 aa12.01□□□□□ -0.49
HMGN1-206ENST00000431390 Q6ZRN7 208 aaPredicted RBP12.01□□□□□ -0.49
HMGN1-206ENST00000431390 C6orf223Q8N319 242 aa12.01□□□□□ -0.49
HMGN1-206ENST00000431390 HIST1H4GQ99525 98 aa12.01□□□□□ -0.49
HMGN1-206ENST00000431390 DNAH6Q9C0G6 4158 aa12.01□□□□□ -0.49
HMGN1-206ENST00000431390 SRSF9Q13242 221 aaKnown RBP eCLIP12□□□□□ -0.49
HMGN1-206ENST00000431390 Q6ZVH6 145 aa12□□□□□ -0.49
HMGN1-206ENST00000431390 LINC00526Q96FQ7 95 aa12□□□□□ -0.49
HMGN1-206ENST00000431390 SPANXDQ9BXN6 97 aa12□□□□□ -0.49
HMGN1-206ENST00000431390 SPANXCQ9NY87 97 aa12□□□□□ -0.49
HMGN1-206ENST00000431390 M0R143 59 aa11.98□□□□□ -0.49
HMGN1-206ENST00000431390 UNQ6190/PRO20217Q6UXQ8 127 aa11.98□□□□□ -0.49
HMGN1-206ENST00000431390 CAMK2N2Q96S95 79 aa11.98□□□□□ -0.49
HMGN1-206ENST00000431390 ERG28Q9UKR5 140 aa11.98□□□□□ -0.49
HMGN1-206ENST00000431390 SMIM13P0DJ93 91 aa11.97□□□□□ -0.49
HMGN1-206ENST00000431390 ADAMTSL4-AS1Q5T5F5 129 aa11.97□□□□□ -0.49
HMGN1-206ENST00000431390 CEND1Q8N111 149 aa11.97□□□□□ -0.49
HMGN1-206ENST00000431390 HINT1P49773 126 aaPredicted RBP11.96□□□□□ -0.49
HMGN1-206ENST00000431390 COX17Q14061 63 aa11.96□□□□□ -0.49
HMGN1-206ENST00000431390 C10orf25Q5T742 122 aa11.96□□□□□ -0.49
HMGN1-206ENST00000431390 RYR1P21817 5038 aa11.96□□□□□ -0.49
HMGN1-206ENST00000431390 TRBV30A0A0K0K1B3 111 aa11.96□□□□□ -0.5
HMGN1-206ENST00000431390 BVES-AS1Q5T3Y7 98 aa11.96□□□□□ -0.5
HMGN1-206ENST00000431390 GCSHP23434 173 aa11.95□□□□□ -0.5
HMGN1-206ENST00000431390 C14orf177Q52M58 125 aa11.95□□□□□ -0.5
HMGN1-206ENST00000431390 LECT2O14960 151 aa11.94□□□□□ -0.5
HMGN1-206ENST00000431390 IFITM1P13164 125 aa11.94□□□□□ -0.5
HMGN1-206ENST00000431390 LINC00158P58513 81 aa11.94□□□□□ -0.5
HMGN1-206ENST00000431390 Q6ZRU5 148 aa11.94□□□□□ -0.5
HMGN1-206ENST00000431390 C6orf48Q9UBA6 75 aa11.94□□□□□ -0.5
HMGN1-206ENST00000431390 A0A0U1RRA0 63 aa11.93□□□□□ -0.5
HMGN1-206ENST00000431390 PTTG1IPP53801 180 aa11.93□□□□□ -0.5
HMGN1-206ENST00000431390 SYCNQ0VAF6 134 aa11.93□□□□□ -0.5
HMGN1-206ENST00000431390 WFDC2Q14508 124 aa11.93□□□□□ -0.5
HMGN1-206ENST00000431390 C1orf134Q5TEV5 83 aa11.93□□□□□ -0.5
HMGN1-206ENST00000431390 SNHG12Q9BXW3 62 aa11.93□□□□□ -0.5
HMGN1-206ENST00000431390 LRCOL1A6NCL2 159 aa11.92□□□□□ -0.5
HMGN1-206ENST00000431390 PFN2P35080 140 aa11.92□□□□□ -0.5
HMGN1-206ENST00000431390 DAND5Q8N907 189 aa11.92□□□□□ -0.5
HMGN1-206ENST00000431390 COPS9Q8WXC6 57 aa11.92□□□□□ -0.5
HMGN1-206ENST00000431390 PPDPFQ9H3Y8 114 aa11.92□□□□□ -0.5
HMGN1-206ENST00000431390 MUSTN1Q8IVN3 82 aa11.92□□□□□ -0.5
HMGN1-206ENST00000431390 MIR7-3HGQ8N6C7 128 aa11.92□□□□□ -0.5
HMGN1-206ENST00000431390 FXYD2P54710 66 aa11.91□□□□□ -0.5
HMGN1-206ENST00000431390 RNF151Q2KHN1 245 aa11.91□□□□□ -0.5
HMGN1-206ENST00000431390 C9orf116Q5BN46 136 aaPredicted RBP11.91□□□□□ -0.5
HMGN1-206ENST00000431390 EREGO14944 169 aa11.9□□□□□ -0.5
HMGN1-206ENST00000431390 RPL24P83731 157 aaKnown RBP11.9□□□□□ -0.5
HMGN1-206ENST00000431390 BATFQ16520 125 aa11.9□□□□□ -0.5
HMGN1-206ENST00000431390 LINC00308Q8TCZ7 52 aa11.9□□□□□ -0.5
HMGN1-206ENST00000431390 CARD19Q96LW7 228 aa11.9□□□□□ -0.5
HMGN1-206ENST00000431390 TMEM238LA0A1B0GVL6 79 aa11.89□□□□□ -0.51
HMGN1-206ENST00000431390 A6NJY4 79 aa11.89□□□□□ -0.51
HMGN1-206ENST00000431390 SLPIP03973 132 aa11.89□□□□□ -0.51
HMGN1-206ENST00000431390 PKHD1P08F94 4074 aa11.88□□□□□ -0.51
HMGN1-206ENST00000431390 FAT2Q9NYQ8 4349 aa11.88□□□□□ -0.51
HMGN1-206ENST00000431390 CNBPP62633 177 aaKnown RBP11.88□□□□□ -0.51
HMGN1-206ENST00000431390 NPC2P61916 151 aa11.87□□□□□ -0.51
HMGN1-206ENST00000431390 LINC00336Q6ZUF6 198 aa11.87□□□□□ -0.51
HMGN1-206ENST00000431390 A0A1B0GVY2 172 aa11.86□□□□□ -0.51
HMGN1-206ENST00000431390 A6NDN8 102 aa11.86□□□□□ -0.51
HMGN1-206ENST00000431390 SOSTDC1Q6X4U4 206 aa11.86□□□□□ -0.51
HMGN1-206ENST00000431390 DNAH2Q9P225 4427 aa11.86□□□□□ -0.51
HMGN1-206ENST00000431390 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.85□□□□□ -0.51
HMGN1-206ENST00000431390 LOC107984156A0A0G2JMH3 177 aa11.85□□□□□ -0.51
HMGN1-206ENST00000431390 A4D1N5 150 aa11.85□□□□□ -0.51
HMGN1-206ENST00000431390 NDUFC2-KCTD14E9PQ53 114 aa11.85□□□□□ -0.51
HMGN1-206ENST00000431390 EIF4EBP3O60516 100 aaPredicted RBP11.85□□□□□ -0.51
HMGN1-206ENST00000431390 TLX1NBP0CAT3 122 aa11.85□□□□□ -0.51
HMGN1-206ENST00000431390 ARL17AQ8IVW1 177 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms