RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 SMIM29Q86T20 159 aa3.66□□□□□ -1.82
PTPN4-203ENST00000430976 ZFAND2AQ8N6M9 145 aa3.66□□□□□ -1.82
PTPN4-203ENST00000430976 TOMM7Q9P0U1 55 aa3.66□□□□□ -1.82
PTPN4-203ENST00000430976 COL4A3Q01955 1670 aa3.66□□□□□ -1.82
PTPN4-203ENST00000430976 IGKV3D-15A0A087WSY6 115 aa3.66□□□□□ -1.82
PTPN4-203ENST00000430976 IGKV3-15P01624 115 aa3.66□□□□□ -1.82
PTPN4-203ENST00000430976 CR1P17927 2039 aa3.66□□□□□ -1.82
PTPN4-203ENST00000430976 DMDP11532 3685 aa3.66□□□□□ -1.82
PTPN4-203ENST00000430976 ERC2-IT1O76042 136 aa3.66□□□□□ -1.82
PTPN4-203ENST00000430976 MSMBP08118 114 aa3.66□□□□□ -1.82
PTPN4-203ENST00000430976 HMGA1P17096 107 aaKnown RBP3.66□□□□□ -1.82
PTPN4-203ENST00000430976 LINC00158P58513 81 aa3.66□□□□□ -1.82
PTPN4-203ENST00000430976 LINC00242Q5T6M2 205 aa3.66□□□□□ -1.82
PTPN4-203ENST00000430976 DEFB108BQ8NET1 73 aa3.66□□□□□ -1.82
PTPN4-203ENST00000430976 CIRBP-AS1Q8TBR5 109 aa3.66□□□□□ -1.82
PTPN4-203ENST00000430976 XAGE1AQ9HD64 81 aa3.66□□□□□ -1.82
PTPN4-203ENST00000430976 IGHV3-11P01762 117 aa3.66□□□□□ -1.82
PTPN4-203ENST00000430976 P0C879 139 aa3.66□□□□□ -1.82
PTPN4-203ENST00000430976 PRCDQ00LT1 54 aa3.66□□□□□ -1.82
PTPN4-203ENST00000430976 OCR1Q9BZK8 76 aa3.66□□□□□ -1.82
PTPN4-203ENST00000430976 IGKV3D-11A0A0A0MRZ8 115 aa3.65□□□□□ -1.82
PTPN4-203ENST00000430976 IGHV3-66A0A0C4DH42 116 aa3.65□□□□□ -1.82
PTPN4-203ENST00000430976 A0A0J9YWU9 116 aa3.65□□□□□ -1.82
PTPN4-203ENST00000430976 PATE3B3GLJ2 98 aa3.65□□□□□ -1.82
PTPN4-203ENST00000430976 IGHV4OR15-8A0A075B7B6 117 aa3.65□□□□□ -1.83
PTPN4-203ENST00000430976 A0A087WW49 117 aa3.65□□□□□ -1.83
PTPN4-203ENST00000430976 CYSRT1A8MQ03 144 aa3.65□□□□□ -1.83
PTPN4-203ENST00000430976 SPINK7P58062 85 aa3.65□□□□□ -1.83
PTPN4-203ENST00000430976 IGKV3-7A0A075B6H7 116 aa3.65□□□□□ -1.83
PTPN4-203ENST00000430976 COX7B2Q8TF08 81 aa3.65□□□□□ -1.83
PTPN4-203ENST00000430976 ZFHX4Q86UP3 3567 aa3.64□□□□□ -1.83
PTPN4-203ENST00000430976 IGLV4-69A0A075B6H9 119 aa3.64□□□□□ -1.83
PTPN4-203ENST00000430976 LINC00167Q96N53 147 aa3.64□□□□□ -1.83
PTPN4-203ENST00000430976 IGLV2-23P01705 113 aa3.64□□□□□ -1.83
PTPN4-203ENST00000430976 ZNRD1Q9P1U0 126 aa3.64□□□□□ -1.83
PTPN4-203ENST00000430976 SPEGQ15772 3267 aa3.63□□□□□ -1.83
PTPN4-203ENST00000430976 C17orf58Q2M2W7 97 aa3.63□□□□□ -1.83
PTPN4-203ENST00000430976 Q6ZR54 194 aa3.63□□□□□ -1.83
PTPN4-203ENST00000430976 NOTCH1P46531 2555 aa3.63□□□□□ -1.83
PTPN4-203ENST00000430976 IGLV2-18A0A075B6J9 118 aa3.63□□□□□ -1.83
PTPN4-203ENST00000430976 IGKV3OR2-268A0A0C4DH90 116 aa3.63□□□□□ -1.83
PTPN4-203ENST00000430976 ANKHD1Q8IWZ3 2542 aaKnown RBP3.63□□□□□ -1.83
PTPN4-203ENST00000430976 DNAH14Q0VDD8 3507 aa3.63□□□□□ -1.83
PTPN4-203ENST00000430976 IGHV3-23P01764 117 aa3.62□□□□□ -1.83
PTPN4-203ENST00000430976 SSBP3-AS1Q7Z2R9 100 aa3.62□□□□□ -1.83
PTPN4-203ENST00000430976 LINC00308Q8TCZ7 52 aa3.62□□□□□ -1.83
PTPN4-203ENST00000430976 IGLV5-52A0A0A0MRZ9 124 aa3.62□□□□□ -1.83
PTPN4-203ENST00000430976 HTN1P15515 57 aa3.62□□□□□ -1.83
PTPN4-203ENST00000430976 ACACBO00763 2458 aa3.62□□□□□ -1.83
PTPN4-203ENST00000430976 TRGV4A0A0C4DH28 118 aa3.62□□□□□ -1.83
PTPN4-203ENST00000430976 H0Y9P7 68 aa3.62□□□□□ -1.83
PTPN4-203ENST00000430976 CCL26Q9Y258 94 aa3.62□□□□□ -1.83
PTPN4-203ENST00000430976 MRPL33O75394 65 aaKnown RBP3.62□□□□□ -1.83
PTPN4-203ENST00000430976 IGLV3-1P01715 115 aa3.62□□□□□ -1.83
PTPN4-203ENST00000430976 C20orf166-AS1Q96NR2 134 aa3.62□□□□□ -1.83
PTPN4-203ENST00000430976 PRRC2CQ9Y520 2896 aaKnown RBP3.61□□□□□ -1.83
PTPN4-203ENST00000430976 IGLV5-37A0A075B6J1 123 aa3.61□□□□□ -1.83
PTPN4-203ENST00000430976 DNAH10OSP0CZ25 163 aa3.61□□□□□ -1.83
PTPN4-203ENST00000430976 ZFP36P26651 326 aaKnown RBP3.61□□□□□ -1.83
PTPN4-203ENST00000430976 WT1-ASQ06250 92 aa3.61□□□□□ -1.83
PTPN4-203ENST00000430976 ZNF833PQ6ZTB9 187 aa3.61□□□□□ -1.83
PTPN4-203ENST00000430976 LINC01006Q8NI28 216 aa3.61□□□□□ -1.83
PTPN4-203ENST00000430976 PLXNB2O15031 1838 aa3.61□□□□□ -1.83
PTPN4-203ENST00000430976 MYO9AB2RTY4 2548 aa3.61□□□□□ -1.83
PTPN4-203ENST00000430976 IGF2RP11717 2491 aa3.61□□□□□ -1.83
PTPN4-203ENST00000430976 LTBP2Q14767 1821 aa3.61□□□□□ -1.83
PTPN4-203ENST00000430976 IGLV8-61A0A075B6I0 122 aa3.61□□□□□ -1.83
PTPN4-203ENST00000430976 IGLV4-3A0A075B6K6 122 aa3.61□□□□□ -1.83
PTPN4-203ENST00000430976 CCL14Q16627 93 aa3.61□□□□□ -1.83
PTPN4-203ENST00000430976 DEFB126Q9BYW3 111 aa3.61□□□□□ -1.83
PTPN4-203ENST00000430976 FAM215AQ9Y5M1 114 aa3.61□□□□□ -1.83
PTPN4-203ENST00000430976 MYO15AQ9UKN7 3530 aa3.61□□□□□ -1.83
PTPN4-203ENST00000430976 IGIPA6NJ69 53 aa3.61□□□□□ -1.83
PTPN4-203ENST00000430976 TTTY12Q9BZ98 90 aa3.61□□□□□ -1.83
PTPN4-203ENST00000430976 SMIM1B2RUZ4 78 aa3.6□□□□□ -1.83
PTPN4-203ENST00000430976 Q6ZQY7 126 aa3.6□□□□□ -1.83
PTPN4-203ENST00000430976 IGKV1D-37A0A075B6S9 117 aa3.6□□□□□ -1.83
PTPN4-203ENST00000430976 PRAC2D3DTV9 90 aa3.6□□□□□ -1.83
PTPN4-203ENST00000430976 COA5Q86WW8 74 aa3.6□□□□□ -1.83
PTPN4-203ENST00000430976 LINC00467Q9BRT7 94 aa3.6□□□□□ -1.83
PTPN4-203ENST00000430976 CHD9Q3L8U1 2897 aa3.6□□□□□ -1.83
PTPN4-203ENST00000430976 DSPP15924 2871 aaKnown RBP3.6□□□□□ -1.83
PTPN4-203ENST00000430976 NTM-AS1Q6ZSK4 140 aa3.59□□□□□ -1.83
PTPN4-203ENST00000430976 LINC01560Q8TB33 94 aa3.59□□□□□ -1.83
PTPN4-203ENST00000430976 AMELXQ99217 191 aa3.59□□□□□ -1.83
PTPN4-203ENST00000430976 MTORP42345 2549 aa3.59□□□□□ -1.83
PTPN4-203ENST00000430976 TRANK1O15050 2925 aa3.59□□□□□ -1.83
PTPN4-203ENST00000430976 SPTBN4Q9H254 2564 aa3.59□□□□□ -1.83
PTPN4-203ENST00000430976 ETDCA0A1B0GVM5 59 aa3.59□□□□□ -1.83
PTPN4-203ENST00000430976 A0A1B0GW54 56 aa3.59□□□□□ -1.83
PTPN4-203ENST00000430976 H3BPC8 53 aa3.59□□□□□ -1.83
PTPN4-203ENST00000430976 IGKV1-17P01599 117 aa3.59□□□□□ -1.83
PTPN4-203ENST00000430976 PRO3102Q9H379 93 aa3.59□□□□□ -1.83
PTPN4-203ENST00000430976 IGLV5-39A0A0G2JS06 123 aa3.59□□□□□ -1.84
PTPN4-203ENST00000430976 A0A1B0GU69 56 aa3.59□□□□□ -1.84
PTPN4-203ENST00000430976 SMIM11BQ8TCY0 68 aa3.59□□□□□ -1.84
PTPN4-203ENST00000430976 TRGV2A0A075B6R0 118 aa3.59□□□□□ -1.84
PTPN4-203ENST00000430976 Q8NBF4 154 aa3.59□□□□□ -1.84
PTPN4-203ENST00000430976 WDFY4Q6ZS81 3184 aa3.58□□□□□ -1.84
PTPN4-203ENST00000430976 ELOF1P60002 83 aaKnown RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms