RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 RAB5BP61020 215 aa6.12□□□□□ -1.43
HDAC6-207ENST00000430858 CKS1BP61024 79 aa6.12□□□□□ -1.43
HDAC6-207ENST00000430858 PMVKQ15126 192 aa6.12□□□□□ -1.43
HDAC6-207ENST00000430858 C6orf226Q5I0X4 101 aa6.12□□□□□ -1.43
HDAC6-207ENST00000430858 C2orf82Q6UX34 121 aa6.12□□□□□ -1.43
HDAC6-207ENST00000430858 LINC00469Q8N7U9 141 aa6.12□□□□□ -1.43
HDAC6-207ENST00000430858 TOMM7Q9P0U1 55 aa6.12□□□□□ -1.43
HDAC6-207ENST00000430858 IGLV5-45A0A087WSX0 123 aa6.11□□□□□ -1.43
HDAC6-207ENST00000430858 A6NJY4 79 aa6.11□□□□□ -1.43
HDAC6-207ENST00000430858 NDUFC2-KCTD14E9PQ53 114 aa6.11□□□□□ -1.43
HDAC6-207ENST00000430858 LCE2BO14633 110 aa6.11□□□□□ -1.43
HDAC6-207ENST00000430858 URB1-AS1Q96HZ7 61 aa6.11□□□□□ -1.43
HDAC6-207ENST00000430858 YPEL4Q96NS1 127 aa6.11□□□□□ -1.43
HDAC6-207ENST00000430858 A0A096LNJ9 63 aa6.1□□□□□ -1.43
HDAC6-207ENST00000430858 HBDP02042 147 aa6.1□□□□□ -1.43
HDAC6-207ENST00000430858 CXCL5P42830 114 aa6.1□□□□□ -1.43
HDAC6-207ENST00000430858 GAGE2EQ4V326 116 aa6.1□□□□□ -1.43
HDAC6-207ENST00000430858 PDZD11Q5EBL8 140 aa6.1□□□□□ -1.43
HDAC6-207ENST00000430858 GAGE2DQ9UEU5 116 aa6.1□□□□□ -1.43
HDAC6-207ENST00000430858 SMIM1B2RUZ4 78 aa6.09□□□□□ -1.43
HDAC6-207ENST00000430858 F8VRH5 84 aa6.09□□□□□ -1.43
HDAC6-207ENST00000430858 HERC1Q15751 4861 aa6.09□□□□□ -1.43
HDAC6-207ENST00000430858 FAM168BA1KXE4 195 aa6.08□□□□□ -1.44
HDAC6-207ENST00000430858 H3BRM9 83 aa6.08□□□□□ -1.44
HDAC6-207ENST00000430858 ATP5LO75964 103 aa6.08□□□□□ -1.44
HDAC6-207ENST00000430858 SPINK6Q6UWN8 80 aa6.08□□□□□ -1.44
HDAC6-207ENST00000430858 PHF5AQ7RTV0 110 aaKnown RBP6.08□□□□□ -1.44
HDAC6-207ENST00000430858 IGLC3P0DOY3 106 aa6.07□□□□□ -1.44
HDAC6-207ENST00000430858 NDUFA6P56556 154 aa6.07□□□□□ -1.44
HDAC6-207ENST00000430858 PMCHL1Q16048 86 aa6.07□□□□□ -1.44
HDAC6-207ENST00000430858 FAM19A5Q7Z5A7 132 aaPredicted RBP6.07□□□□□ -1.44
HDAC6-207ENST00000430858 CBLN2Q8IUK8 224 aa6.07□□□□□ -1.44
HDAC6-207ENST00000430858 COX7B2Q8TF08 81 aa6.07□□□□□ -1.44
HDAC6-207ENST00000430858 CHCHD1Q96BP2 118 aaKnown RBP6.07□□□□□ -1.44
HDAC6-207ENST00000430858 LRP1Q07954 4544 aaKnown RBP6.07□□□□□ -1.44
HDAC6-207ENST00000430858 SPINK8P0C7L1 97 aa6.06□□□□□ -1.44
HDAC6-207ENST00000430858 SRSF9Q13242 221 aaKnown RBP eCLIP6.06□□□□□ -1.44
HDAC6-207ENST00000430858 C9orf129Q5T035 196 aaKnown RBP6.06□□□□□ -1.44
HDAC6-207ENST00000430858 SLC7A5P1Q8MH63 180 aa6.06□□□□□ -1.44
HDAC6-207ENST00000430858 PSORS1C2Q9UIG4 136 aa6.06□□□□□ -1.44
HDAC6-207ENST00000430858 M0QXV9 152 aa6.05□□□□□ -1.44
HDAC6-207ENST00000430858 SERTAD4-AS1Q5TG53 156 aa6.05□□□□□ -1.44
HDAC6-207ENST00000430858 KRTAP7-1Q8IUC3 87 aa6.05□□□□□ -1.44
HDAC6-207ENST00000430858 PKHD1L1Q86WI1 4243 aa6.04□□□□□ -1.44
HDAC6-207ENST00000430858 MT1HL1P0DM35 61 aa6.04□□□□□ -1.44
HDAC6-207ENST00000430858 ZNF22P17026 224 aaPredicted RBP6.04□□□□□ -1.44
HDAC6-207ENST00000430858 C1orf137Q5JT78 98 aa6.04□□□□□ -1.44
HDAC6-207ENST00000430858 REG3GQ6UW15 175 aa6.04□□□□□ -1.44
HDAC6-207ENST00000430858 BAGE3Q86Y29 109 aa6.04□□□□□ -1.44
HDAC6-207ENST00000430858 LINC01600Q96MT4 127 aa6.04□□□□□ -1.44
HDAC6-207ENST00000430858 FAT3Q8TDW7 4589 aa6.04□□□□□ -1.44
HDAC6-207ENST00000430858 IGLV5-39A0A0G2JS06 123 aa6.03□□□□□ -1.44
HDAC6-207ENST00000430858 TRGC2P03986 189 aa6.03□□□□□ -1.44
HDAC6-207ENST00000430858 UBE2BP63146 152 aa6.03□□□□□ -1.44
HDAC6-207ENST00000430858 ODF1Q14990 250 aa6.03□□□□□ -1.44
HDAC6-207ENST00000430858 XAGE1AQ9HD64 81 aa6.03□□□□□ -1.44
HDAC6-207ENST00000430858 TRAV12-1A0A0B4J245 112 aa6.02□□□□□ -1.45
HDAC6-207ENST00000430858 C11orf86A6NJI1 115 aa6.02□□□□□ -1.45
HDAC6-207ENST00000430858 HSBP1O75506 76 aa6.02□□□□□ -1.45
HDAC6-207ENST00000430858 KRTAP11-1Q8IUC1 163 aa6.02□□□□□ -1.45
HDAC6-207ENST00000430858 IFI27L1Q96BM0 104 aa6.02□□□□□ -1.45
HDAC6-207ENST00000430858 CHTOPQ9Y3Y2 248 aaKnown RBP6.02□□□□□ -1.45
HDAC6-207ENST00000430858 IGLV7-43P04211 117 aa6.01□□□□□ -1.45
HDAC6-207ENST00000430858 LBHQ53QV2 105 aaPredicted RBP6.01□□□□□ -1.45
HDAC6-207ENST00000430858 TMEM170BQ5T4T1 132 aa6.01□□□□□ -1.45
HDAC6-207ENST00000430858 SFTA2Q6UW10 78 aa6.01□□□□□ -1.45
HDAC6-207ENST00000430858 TP73-AS1Q9UF72 201 aa6.01□□□□□ -1.45
HDAC6-207ENST00000430858 C22orf24Q9Y442 160 aa6.01□□□□□ -1.45
HDAC6-207ENST00000430858 PLA2G2DQ9UNK4 145 aa6□□□□□ -1.45
HDAC6-207ENST00000430858 COLCA2A8K830 154 aa5.99□□□□□ -1.45
HDAC6-207ENST00000430858 MRPL55Q7Z7F7 128 aaKnown RBP5.99□□□□□ -1.45
HDAC6-207ENST00000430858 FAM19A2Q8N3H0 131 aa5.99□□□□□ -1.45
HDAC6-207ENST00000430858 DIRC1Q969H9 104 aa5.99□□□□□ -1.45
HDAC6-207ENST00000430858 TMEM223A0PJW6 202 aa5.98□□□□□ -1.45
HDAC6-207ENST00000430858 NUPR1O60356 82 aa5.98□□□□□ -1.45
HDAC6-207ENST00000430858 SERF1AO75920 110 aa5.98□□□□□ -1.45
HDAC6-207ENST00000430858 COX17Q14061 63 aa5.98□□□□□ -1.45
HDAC6-207ENST00000430858 ERG28Q9UKR5 140 aa5.98□□□□□ -1.45
HDAC6-207ENST00000430858 IGLV5-37A0A075B6J1 123 aa5.97□□□□□ -1.45
HDAC6-207ENST00000430858 LEPROTL1O95214 131 aa5.97□□□□□ -1.45
HDAC6-207ENST00000430858 PFN2P35080 140 aa5.97□□□□□ -1.45
HDAC6-207ENST00000430858 LINC00310P59036 64 aa5.97□□□□□ -1.45
HDAC6-207ENST00000430858 KRTAP10-8P60410 259 aa5.97□□□□□ -1.45
HDAC6-207ENST00000430858 H0Y9J4 135 aa5.96□□□□□ -1.46
HDAC6-207ENST00000430858 ZNF625Q96I27 306 aaPredicted RBP5.96□□□□□ -1.46
HDAC6-207ENST00000430858 HSPB8Q9UJY1 196 aa5.96□□□□□ -1.46
HDAC6-207ENST00000430858 H0Y8G0 127 aa5.95□□□□□ -1.46
HDAC6-207ENST00000430858 ZNF861PO60384 105 aa5.95□□□□□ -1.46
HDAC6-207ENST00000430858 NKAPP1Q8N9T2 125 aa5.95□□□□□ -1.46
HDAC6-207ENST00000430858 LINC00167Q96N53 147 aa5.95□□□□□ -1.46
HDAC6-207ENST00000430858 SND1-IT1Q9HBX3 110 aa5.95□□□□□ -1.46
HDAC6-207ENST00000430858 RPL24P83731 157 aaKnown RBP5.94□□□□□ -1.46
HDAC6-207ENST00000430858 GAGE10A6NGK3 116 aa5.93□□□□□ -1.46
HDAC6-207ENST00000430858 RPL37AP8A6NKH3 93 aa5.93□□□□□ -1.46
HDAC6-207ENST00000430858 BCE1O60756 84 aa5.93□□□□□ -1.46
HDAC6-207ENST00000430858 PLNP26678 52 aa5.93□□□□□ -1.46
HDAC6-207ENST00000430858 LINC00158P58513 81 aa5.93□□□□□ -1.46
HDAC6-207ENST00000430858 HERV-K104P63124 156 aa5.93□□□□□ -1.46
HDAC6-207ENST00000430858 TNXBP22105 4242 aa5.92□□□□□ -1.46
HDAC6-207ENST00000430858 LINC00587B1AMM8 73 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms