RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 CKS1BP61024 79 aa11.17□□□□□ -0.62
LINC00887-203ENST00000429578 TNP2Q05952 138 aa11.17□□□□□ -0.62
LINC00887-203ENST00000429578 C2orf48Q96LS8 159 aa11.17□□□□□ -0.62
LINC00887-203ENST00000429578 F8WDY8 70 aa11.15□□□□□ -0.62
LINC00887-203ENST00000429578 C2orf82Q6UX34 121 aa11.15□□□□□ -0.62
LINC00887-203ENST00000429578 LINC00336Q6ZUF6 198 aa11.15□□□□□ -0.62
LINC00887-203ENST00000429578 Q8N814 137 aa11.15□□□□□ -0.62
LINC00887-203ENST00000429578 NDUFA12Q9UI09 145 aa11.15□□□□□ -0.62
LINC00887-203ENST00000429578 FAT2Q9NYQ8 4349 aa11.15□□□□□ -0.62
LINC00887-203ENST00000429578 SFTA2Q6UW10 78 aa11.15□□□□□ -0.63
LINC00887-203ENST00000429578 ZNF625Q96I27 306 aaPredicted RBP11.15□□□□□ -0.63
LINC00887-203ENST00000429578 CAMK2N2Q96S95 79 aa11.15□□□□□ -0.63
LINC00887-203ENST00000429578 C12orf57Q99622 126 aa11.15□□□□□ -0.63
LINC00887-203ENST00000429578 TTTY13Q9BZ97 58 aa11.15□□□□□ -0.63
LINC00887-203ENST00000429578 NDUFA1O15239 70 aa11.14□□□□□ -0.63
LINC00887-203ENST00000429578 PCP2Q8IVA1 136 aa11.14□□□□□ -0.63
LINC00887-203ENST00000429578 SLPIP03973 132 aa11.13□□□□□ -0.63
LINC00887-203ENST00000429578 DNAH17Q9UFH2 4485 aa11.13□□□□□ -0.63
LINC00887-203ENST00000429578 MYMXA0A1B0GTQ4 84 aa11.12□□□□□ -0.63
LINC00887-203ENST00000429578 EREGO14944 169 aa11.12□□□□□ -0.63
LINC00887-203ENST00000429578 UNQ6190/PRO20217Q6UXQ8 127 aa11.12□□□□□ -0.63
LINC00887-203ENST00000429578 LINC00518Q8N0U6 118 aa11.12□□□□□ -0.63
LINC00887-203ENST00000429578 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.12□□□□□ -0.63
LINC00887-203ENST00000429578 ZNF815PA8K554 130 aa11.12□□□□□ -0.63
LINC00887-203ENST00000429578 COX8AP10176 69 aa11.12□□□□□ -0.63
LINC00887-203ENST00000429578 SYCNQ0VAF6 134 aa11.12□□□□□ -0.63
LINC00887-203ENST00000429578 C10orf25Q5T742 122 aa11.12□□□□□ -0.63
LINC00887-203ENST00000429578 CNBPP62633 177 aaKnown RBP11.11□□□□□ -0.63
LINC00887-203ENST00000429578 HERV-K104P63124 156 aa11.11□□□□□ -0.63
LINC00887-203ENST00000429578 Q6ZRU5 148 aa11.11□□□□□ -0.63
LINC00887-203ENST00000429578 C14orf144Q96I85 54 aa11.11□□□□□ -0.63
LINC00887-203ENST00000429578 BOD1L2Q8IYS8 172 aa11.1□□□□□ -0.63
LINC00887-203ENST00000429578 CARD19Q96LW7 228 aa11.1□□□□□ -0.63
LINC00887-203ENST00000429578 TRBV30A0A0K0K1B3 111 aa11.09□□□□□ -0.63
LINC00887-203ENST00000429578 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.09□□□□□ -0.63
LINC00887-203ENST00000429578 C6orf48Q9UBA6 75 aa11.09□□□□□ -0.63
LINC00887-203ENST00000429578 HERC2O95714 4834 aa11.08□□□□□ -0.64
LINC00887-203ENST00000429578 DLEU1O43261 78 aa11.08□□□□□ -0.64
LINC00887-203ENST00000429578 A0A0J9YXY3 114 aa11.06□□□□□ -0.64
LINC00887-203ENST00000429578 A0A1B0GVY2 172 aa11.06□□□□□ -0.64
LINC00887-203ENST00000429578 RNF151Q2KHN1 245 aa11.06□□□□□ -0.64
LINC00887-203ENST00000429578 SLC25A34Q6PIV7 304 aa11.06□□□□□ -0.64
LINC00887-203ENST00000429578 C9orf116Q5BN46 136 aaPredicted RBP11.06□□□□□ -0.64
LINC00887-203ENST00000429578 SCGB1D4Q6XE38 83 aa11.06□□□□□ -0.64
LINC00887-203ENST00000429578 TP73-AS1Q9UF72 201 aa11.06□□□□□ -0.64
LINC00887-203ENST00000429578 ERG28Q9UKR5 140 aa11.06□□□□□ -0.64
LINC00887-203ENST00000429578 MEIG1Q5JSS6 88 aa11.05□□□□□ -0.64
LINC00887-203ENST00000429578 PKHD1P08F94 4074 aa11.04□□□□□ -0.64
LINC00887-203ENST00000429578 LINC00587B1AMM8 73 aa11.04□□□□□ -0.64
LINC00887-203ENST00000429578 COX17Q14061 63 aa11.04□□□□□ -0.64
LINC00887-203ENST00000429578 C9orf163Q8N9P6 203 aa11.04□□□□□ -0.64
LINC00887-203ENST00000429578 DYNC1H1Q14204 4646 aaKnown RBP11.03□□□□□ -0.64
LINC00887-203ENST00000429578 PFN2P35080 140 aa11.03□□□□□ -0.64
LINC00887-203ENST00000429578 CIRBPQ14011 172 aaKnown RBP11.03□□□□□ -0.64
LINC00887-203ENST00000429578 PRO1933Q9H354 126 aa11.03□□□□□ -0.64
LINC00887-203ENST00000429578 UQCR10Q9UDW1 63 aa11.03□□□□□ -0.64
LINC00887-203ENST00000429578 IGLV5-52A0A0A0MRZ9 124 aa11.02□□□□□ -0.65
LINC00887-203ENST00000429578 SMIM13P0DJ93 91 aa11.02□□□□□ -0.65
LINC00887-203ENST00000429578 KIAA1109Q2LD37 5005 aa11.02□□□□□ -0.65
LINC00887-203ENST00000429578 TIMM17BO60830 172 aa11.01□□□□□ -0.65
LINC00887-203ENST00000429578 KRTAP10-2P60368 255 aa11.01□□□□□ -0.65
LINC00887-203ENST00000429578 PGPEP1Q9NXJ5 209 aa11.01□□□□□ -0.65
LINC00887-203ENST00000429578 PKD1P98161 4303 aa11.01□□□□□ -0.65
LINC00887-203ENST00000429578 A0A0U1RRA0 63 aa11.01□□□□□ -0.65
LINC00887-203ENST00000429578 TLX1NBP0CAT3 122 aa11.01□□□□□ -0.65
LINC00887-203ENST00000429578 FUSP35637 526 aaKnown RBP eCLIP11.01□□□□□ -0.65
LINC00887-203ENST00000429578 LINC00158P58513 81 aa11.01□□□□□ -0.65
LINC00887-203ENST00000429578 NDUFC2-KCTD14E9PQ53 114 aa11□□□□□ -0.65
LINC00887-203ENST00000429578 LITAFQ99732 161 aa11□□□□□ -0.65
LINC00887-203ENST00000429578 DNAH11Q96DT5 4516 aa10.99□□□□□ -0.65
LINC00887-203ENST00000429578 TMEM238C9JI98 176 aa10.99□□□□□ -0.65
LINC00887-203ENST00000429578 TSTD3H0UI37 97 aa10.99□□□□□ -0.65
LINC00887-203ENST00000429578 LOC107984640A0A0U1RRK4 108 aa10.98□□□□□ -0.65
LINC00887-203ENST00000429578 LINC01620Q4KN68 170 aa10.98□□□□□ -0.65
LINC00887-203ENST00000429578 ADAMTSL4-AS1Q5T5F5 129 aa10.98□□□□□ -0.65
LINC00887-203ENST00000429578 C2orf91Q6ZV80 131 aa10.98□□□□□ -0.65
LINC00887-203ENST00000429578 MIEN1Q9BRT3 115 aa10.98□□□□□ -0.65
LINC00887-203ENST00000429578 HIGD1BQ9P298 99 aa10.98□□□□□ -0.65
LINC00887-203ENST00000429578 Q6ZRP5 223 aa10.98□□□□□ -0.65
LINC00887-203ENST00000429578 PKIGQ9Y2B9 76 aa10.98□□□□□ -0.65
LINC00887-203ENST00000429578 MIR7-3HGQ8N6C7 128 aa10.97□□□□□ -0.65
LINC00887-203ENST00000429578 RPL18AQ02543 176 aaKnown RBP10.96□□□□□ -0.65
LINC00887-203ENST00000429578 SDIM1Q6ZPB5 146 aa10.96□□□□□ -0.65
LINC00887-203ENST00000429578 DAND5Q8N907 189 aa10.96□□□□□ -0.65
LINC00887-203ENST00000429578 SPANXB1Q9NS25 103 aaPredicted RBP10.96□□□□□ -0.65
LINC00887-203ENST00000429578 SPANXDQ9BXN6 97 aa10.95□□□□□ -0.66
LINC00887-203ENST00000429578 SPANXCQ9NY87 97 aa10.95□□□□□ -0.66
LINC00887-203ENST00000429578 Q6ZVH6 145 aa10.95□□□□□ -0.66
LINC00887-203ENST00000429578 GAGE2EQ4V326 116 aa10.94□□□□□ -0.66
LINC00887-203ENST00000429578 KRTAP17-1Q9BYP8 105 aa10.94□□□□□ -0.66
LINC00887-203ENST00000429578 SND1-IT1Q9HBX3 110 aa10.94□□□□□ -0.66
LINC00887-203ENST00000429578 GAGE2DQ9UEU5 116 aa10.94□□□□□ -0.66
LINC00887-203ENST00000429578 C16orf90A8MZG2 172 aa10.93□□□□□ -0.66
LINC00887-203ENST00000429578 HNRNPA3P51991 378 aaKnown RBP10.93□□□□□ -0.66
LINC00887-203ENST00000429578 GAGE2BQ13066 116 aa10.93□□□□□ -0.66
LINC00887-203ENST00000429578 SRSF9Q13242 221 aaKnown RBP eCLIP10.93□□□□□ -0.66
LINC00887-203ENST00000429578 A0A096LNI7 61 aa10.92□□□□□ -0.66
LINC00887-203ENST00000429578 GCSHP23434 173 aa10.92□□□□□ -0.66
LINC00887-203ENST00000429578 PTTG1IPP53801 180 aa10.92□□□□□ -0.66
LINC00887-203ENST00000429578 XAGE1AQ9HD64 81 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms