RNA–Protein interactions for RNA: ENST00000428404.5

TRIM39-207, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-207ENST00000428404 LECT2O14960 151 aa8.18□□□□□ -1.1
TRIM39-207ENST00000428404 DLEU1O43261 78 aa8.18□□□□□ -1.1
TRIM39-207ENST00000428404 SLPIP03973 132 aa8.18□□□□□ -1.1
TRIM39-207ENST00000428404 PRSS2P07478 247 aa8.18□□□□□ -1.1
TRIM39-207ENST00000428404 BOD1L2Q8IYS8 172 aa8.18□□□□□ -1.1
TRIM39-207ENST00000428404 C14orf144Q96I85 54 aa8.18□□□□□ -1.1
TRIM39-207ENST00000428404 MYMXA0A1B0GTQ4 84 aa8.17□□□□□ -1.1
TRIM39-207ENST00000428404 CXCL5P42830 114 aa8.17□□□□□ -1.1
TRIM39-207ENST00000428404 C14orf177Q52M58 125 aa8.17□□□□□ -1.1
TRIM39-207ENST00000428404 SFTA2Q6UW10 78 aa8.17□□□□□ -1.1
TRIM39-207ENST00000428404 C2orf82Q6UX34 121 aa8.17□□□□□ -1.1
TRIM39-207ENST00000428404 FAT2Q9NYQ8 4349 aa8.17□□□□□ -1.1
TRIM39-207ENST00000428404 ZNF815PA8K554 130 aa8.16□□□□□ -1.1
TRIM39-207ENST00000428404 CKS1BP61024 79 aa8.16□□□□□ -1.1
TRIM39-207ENST00000428404 C10orf25Q5T742 122 aa8.16□□□□□ -1.1
TRIM39-207ENST00000428404 UNQ6190/PRO20217Q6UXQ8 127 aa8.16□□□□□ -1.1
TRIM39-207ENST00000428404 HERV-K104P63124 156 aa8.15□□□□□ -1.1
TRIM39-207ENST00000428404 SLC25A34Q6PIV7 304 aa8.15□□□□□ -1.1
TRIM39-207ENST00000428404 DNAH11Q96DT5 4516 aa8.15□□□□□ -1.11
TRIM39-207ENST00000428404 HECTD4Q9Y4D8 3996 aa8.14□□□□□ -1.11
TRIM39-207ENST00000428404 A0A0J9YXY3 114 aa8.14□□□□□ -1.11
TRIM39-207ENST00000428404 CNBPP62633 177 aaKnown RBP8.14□□□□□ -1.11
TRIM39-207ENST00000428404 TNP2Q05952 138 aa8.14□□□□□ -1.11
TRIM39-207ENST00000428404 SYCNQ0VAF6 134 aa8.14□□□□□ -1.11
TRIM39-207ENST00000428404 Q6ZRU5 148 aa8.14□□□□□ -1.11
TRIM39-207ENST00000428404 Q8N814 137 aa8.14□□□□□ -1.11
TRIM39-207ENST00000428404 CAMK2N2Q96S95 79 aa8.14□□□□□ -1.11
TRIM39-207ENST00000428404 PRO1933Q9H354 126 aa8.14□□□□□ -1.11
TRIM39-207ENST00000428404 TP73-AS1Q9UF72 201 aa8.14□□□□□ -1.11
TRIM39-207ENST00000428404 RNF151Q2KHN1 245 aa8.13□□□□□ -1.11
TRIM39-207ENST00000428404 C6orf48Q9UBA6 75 aa8.13□□□□□ -1.11
TRIM39-207ENST00000428404 TRBV30A0A0K0K1B3 111 aa8.12□□□□□ -1.11
TRIM39-207ENST00000428404 MIEN1Q9BRT3 115 aa8.12□□□□□ -1.11
TRIM39-207ENST00000428404 UQCR10Q9UDW1 63 aa8.12□□□□□ -1.11
TRIM39-207ENST00000428404 TIMM17BO60830 172 aa8.11□□□□□ -1.11
TRIM39-207ENST00000428404 C9orf116Q5BN46 136 aaPredicted RBP8.11□□□□□ -1.11
TRIM39-207ENST00000428404 C2orf91Q6ZV80 131 aa8.11□□□□□ -1.11
TRIM39-207ENST00000428404 CARD19Q96LW7 228 aa8.11□□□□□ -1.11
TRIM39-207ENST00000428404 LITAFQ99732 161 aa8.11□□□□□ -1.11
TRIM39-207ENST00000428404 HIGD1BQ9P298 99 aa8.11□□□□□ -1.11
TRIM39-207ENST00000428404 LINC00587B1AMM8 73 aa8.1□□□□□ -1.11
TRIM39-207ENST00000428404 COX17Q14061 63 aa8.1□□□□□ -1.11
TRIM39-207ENST00000428404 SCGB1D4Q6XE38 83 aa8.1□□□□□ -1.11
TRIM39-207ENST00000428404 ERG28Q9UKR5 140 aa8.1□□□□□ -1.11
TRIM39-207ENST00000428404 PKD1P98161 4303 aa8.1□□□□□ -1.11
TRIM39-207ENST00000428404 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.09□□□□□ -1.11
TRIM39-207ENST00000428404 TSTD3H0UI37 97 aa8.09□□□□□ -1.11
TRIM39-207ENST00000428404 SMIM13P0DJ93 91 aa8.09□□□□□ -1.11
TRIM39-207ENST00000428404 ADAMTSL4-AS1Q5T5F5 129 aa8.09□□□□□ -1.11
TRIM39-207ENST00000428404 LINC00336Q6ZUF6 198 aa8.09□□□□□ -1.11
TRIM39-207ENST00000428404 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.08□□□□□ -1.12
TRIM39-207ENST00000428404 EREGO14944 169 aa8.08□□□□□ -1.12
TRIM39-207ENST00000428404 TLX1NBP0CAT3 122 aa8.08□□□□□ -1.12
TRIM39-207ENST00000428404 C9orf163Q8N9P6 203 aa8.08□□□□□ -1.12
TRIM39-207ENST00000428404 CIRBPQ14011 172 aaKnown RBP8.07□□□□□ -1.12
TRIM39-207ENST00000428404 MEIG1Q5JSS6 88 aa8.07□□□□□ -1.12
TRIM39-207ENST00000428404 SPANXB1Q9NS25 103 aaPredicted RBP8.07□□□□□ -1.12
TRIM39-207ENST00000428404 NDUFC2-KCTD14E9PQ53 114 aa8.06□□□□□ -1.12
TRIM39-207ENST00000428404 PFN2P35080 140 aa8.06□□□□□ -1.12
TRIM39-207ENST00000428404 LINC00158P58513 81 aa8.06□□□□□ -1.12
TRIM39-207ENST00000428404 SPANXDQ9BXN6 97 aa8.06□□□□□ -1.12
TRIM39-207ENST00000428404 SPANXCQ9NY87 97 aa8.06□□□□□ -1.12
TRIM39-207ENST00000428404 A0A0U1RRA0 63 aa8.05□□□□□ -1.12
TRIM39-207ENST00000428404 TMEM238C9JI98 176 aa8.05□□□□□ -1.12
TRIM39-207ENST00000428404 PTTG1IPP53801 180 aa8.05□□□□□ -1.12
TRIM39-207ENST00000428404 KRTAP10-2P60368 255 aa8.05□□□□□ -1.12
TRIM39-207ENST00000428404 Q6ZVH6 145 aa8.05□□□□□ -1.12
TRIM39-207ENST00000428404 RYR3Q15413 4870 aa8.05□□□□□ -1.12
TRIM39-207ENST00000428404 HNRNPA3P51991 378 aaKnown RBP8.04□□□□□ -1.12
TRIM39-207ENST00000428404 SDIM1Q6ZPB5 146 aa8.04□□□□□ -1.12
TRIM39-207ENST00000428404 Q6ZRP5 223 aa8.04□□□□□ -1.12
TRIM39-207ENST00000428404 MIR7-3HGQ8N6C7 128 aa8.04□□□□□ -1.12
TRIM39-207ENST00000428404 DAND5Q8N907 189 aa8.04□□□□□ -1.12
TRIM39-207ENST00000428404 PGPEP1Q9NXJ5 209 aa8.04□□□□□ -1.12
TRIM39-207ENST00000428404 LOC107984156A0A0G2JMH3 177 aa8.03□□□□□ -1.12
TRIM39-207ENST00000428404 LOC107984640A0A0U1RRK4 108 aa8.03□□□□□ -1.12
TRIM39-207ENST00000428404 EIF4EBP3O60516 100 aaPredicted RBP8.03□□□□□ -1.12
TRIM39-207ENST00000428404 DDTP30046 118 aa8.03□□□□□ -1.12
TRIM39-207ENST00000428404 ARL17AQ8IVW1 177 aa8.03□□□□□ -1.12
TRIM39-207ENST00000428404 PPDPFQ9H3Y8 114 aa8.03□□□□□ -1.12
TRIM39-207ENST00000428404 SND1-IT1Q9HBX3 110 aa8.03□□□□□ -1.12
TRIM39-207ENST00000428404 IGLV5-52A0A0A0MRZ9 124 aa8.02□□□□□ -1.13
TRIM39-207ENST00000428404 A0A1B0GVY2 172 aa8.02□□□□□ -1.13
TRIM39-207ENST00000428404 IFITM1P13164 125 aa8.02□□□□□ -1.13
TRIM39-207ENST00000428404 FUSP35637 526 aaKnown RBP eCLIP8.02□□□□□ -1.13
TRIM39-207ENST00000428404 SRSF9Q13242 221 aaKnown RBP eCLIP8.02□□□□□ -1.13
TRIM39-207ENST00000428404 TAL2Q16559 108 aa8.02□□□□□ -1.13
TRIM39-207ENST00000428404 SOSTDC1Q6X4U4 206 aa8.02□□□□□ -1.13
TRIM39-207ENST00000428404 CTAG1AP78358 180 aa8.01□□□□□ -1.13
TRIM39-207ENST00000428404 LINC01620Q4KN68 170 aa8.01□□□□□ -1.13
TRIM39-207ENST00000428404 LINC00308Q8TCZ7 52 aa8.01□□□□□ -1.13
TRIM39-207ENST00000428404 HIST1H4GQ99525 98 aa8.01□□□□□ -1.13
TRIM39-207ENST00000428404 DNAH5Q8TE73 4624 aa8.01□□□□□ -1.13
TRIM39-207ENST00000428404 C16orf90A8MZG2 172 aa8□□□□□ -1.13
TRIM39-207ENST00000428404 HSD52Q0P140 79 aa8□□□□□ -1.13
TRIM39-207ENST00000428404 MUSTN1Q8IVN3 82 aa8□□□□□ -1.13
TRIM39-207ENST00000428404 PKIGQ9Y2B9 76 aa8□□□□□ -1.13
TRIM39-207ENST00000428404 A0A096LNI7 61 aa7.99□□□□□ -1.13
TRIM39-207ENST00000428404 GCSHP23434 173 aa7.99□□□□□ -1.13
TRIM39-207ENST00000428404 RPL18AQ02543 176 aaKnown RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms