RNA–Protein interactions for RNA: ENST00000427566.2

CLK3P2-201, Transcript of CDC like kinase 3 pseudogene 2, humanhuman

BASIC

Gene CLK3P2, Length 1,453 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P2-201ENST00000427566 CHCHD10Q8WYQ3 142 aaPredicted RBP10.28□□□□□ -0.76
CLK3P2-201ENST00000427566 LRP1BQ9NZR2 4599 aa10.27□□□□□ -0.76
CLK3P2-201ENST00000427566 TINCRA0A1B0GVN0 87 aa10.27□□□□□ -0.77
CLK3P2-201ENST00000427566 GAGE12HA6NDE8 117 aa10.27□□□□□ -0.77
CLK3P2-201ENST00000427566 USP17L23D6RBM5 183 aa10.27□□□□□ -0.77
CLK3P2-201ENST00000427566 HAMPP81172 84 aa10.27□□□□□ -0.77
CLK3P2-201ENST00000427566 ZNF815PA8K554 130 aa10.26□□□□□ -0.77
CLK3P2-201ENST00000427566 LEPROTO15243 131 aa10.26□□□□□ -0.77
CLK3P2-201ENST00000427566 CCL25O15444 150 aa10.25□□□□□ -0.77
CLK3P2-201ENST00000427566 XCL1P47992 114 aa10.25□□□□□ -0.77
CLK3P2-201ENST00000427566 LINC01620Q4KN68 170 aa10.25□□□□□ -0.77
CLK3P2-201ENST00000427566 PLEKHB2Q96CS7 222 aa10.25□□□□□ -0.77
CLK3P2-201ENST00000427566 KRTAP17-1Q9BYP8 105 aa10.25□□□□□ -0.77
CLK3P2-201ENST00000427566 KRTAP4-5Q9BYR2 181 aa10.25□□□□□ -0.77
CLK3P2-201ENST00000427566 RYR1P21817 5038 aa10.24□□□□□ -0.77
CLK3P2-201ENST00000427566 TRAV13-1A0A0B4J241 112 aa10.24□□□□□ -0.77
CLK3P2-201ENST00000427566 J3QQQ9 107 aa10.24□□□□□ -0.77
CLK3P2-201ENST00000427566 TAX1BP3O14907 124 aa10.24□□□□□ -0.77
CLK3P2-201ENST00000427566 UBE2D1P51668 147 aa10.24□□□□□ -0.77
CLK3P2-201ENST00000427566 XGP55808 180 aa10.24□□□□□ -0.77
CLK3P2-201ENST00000427566 C14orf177Q52M58 125 aa10.24□□□□□ -0.77
CLK3P2-201ENST00000427566 FAM19A3Q7Z5A8 133 aa10.24□□□□□ -0.77
CLK3P2-201ENST00000427566 LGALS3P17931 250 aaKnown RBP10.23□□□□□ -0.77
CLK3P2-201ENST00000427566 FOXI1Q12951 378 aa10.23□□□□□ -0.77
CLK3P2-201ENST00000427566 CEND1Q8N111 149 aa10.23□□□□□ -0.77
CLK3P2-201ENST00000427566 Q8N1X5 172 aa10.23□□□□□ -0.77
CLK3P2-201ENST00000427566 SS18Q15532 418 aa10.23□□□□□ -0.77
CLK3P2-201ENST00000427566 IGLV5-45A0A087WSX0 123 aa10.22□□□□□ -0.77
CLK3P2-201ENST00000427566 H3BRM9 83 aa10.22□□□□□ -0.77
CLK3P2-201ENST00000427566 SCGB1D4Q6XE38 83 aa10.22□□□□□ -0.77
CLK3P2-201ENST00000427566 GEMIN7Q9H840 131 aaKnown RBP10.22□□□□□ -0.77
CLK3P2-201ENST00000427566 SMR3BP02814 79 aaPredicted RBP10.21□□□□□ -0.78
CLK3P2-201ENST00000427566 TSPEAR-AS2P59090 65 aa10.21□□□□□ -0.78
CLK3P2-201ENST00000427566 HERVK_113P63121 156 aa10.21□□□□□ -0.78
CLK3P2-201ENST00000427566 C15orf56Q8N910 161 aa10.21□□□□□ -0.78
CLK3P2-201ENST00000427566 HIST1H4GQ99525 98 aa10.21□□□□□ -0.78
CLK3P2-201ENST00000427566 FAM30AQ9NZY2 134 aa10.21□□□□□ -0.78
CLK3P2-201ENST00000427566 IGHV1-58A0A0C4DH39 117 aa10.2□□□□□ -0.78
CLK3P2-201ENST00000427566 HSPG2P98160 4391 aa10.19□□□□□ -0.78
CLK3P2-201ENST00000427566 PTTG1IPP53801 180 aa10.19□□□□□ -0.78
CLK3P2-201ENST00000427566 FXYD2P54710 66 aa10.19□□□□□ -0.78
CLK3P2-201ENST00000427566 CD164L2Q6UWJ8 174 aa10.19□□□□□ -0.78
CLK3P2-201ENST00000427566 LINC00469Q8N7U9 141 aa10.19□□□□□ -0.78
CLK3P2-201ENST00000427566 SPANXB1Q9NS25 103 aaPredicted RBP10.19□□□□□ -0.78
CLK3P2-201ENST00000427566 APOBP04114 4563 aaKnown RBP10.19□□□□□ -0.78
CLK3P2-201ENST00000427566 EPM2AB3EWF7 344 aa10.18□□□□□ -0.78
CLK3P2-201ENST00000427566 SLPIP03973 132 aa10.17□□□□□ -0.78
CLK3P2-201ENST00000427566 SMIM13P0DJ93 91 aa10.17□□□□□ -0.78
CLK3P2-201ENST00000427566 HIGD2BQ4VC39 106 aa10.17□□□□□ -0.78
CLK3P2-201ENST00000427566 LINC00242Q5T6M2 205 aa10.17□□□□□ -0.78
CLK3P2-201ENST00000427566 Q6ZVH6 145 aa10.17□□□□□ -0.78
CLK3P2-201ENST00000427566 C5orf38Q86SI9 138 aa10.17□□□□□ -0.78
CLK3P2-201ENST00000427566 TMEM238LA0A1B0GVL6 79 aa10.16□□□□□ -0.78
CLK3P2-201ENST00000427566 C9orf118A6NHY6 69 aa10.16□□□□□ -0.78
CLK3P2-201ENST00000427566 A6NJY4 79 aa10.16□□□□□ -0.78
CLK3P2-201ENST00000427566 COX6A2Q02221 97 aa10.16□□□□□ -0.78
CLK3P2-201ENST00000427566 SRSF9Q13242 221 aaKnown RBP eCLIP10.16□□□□□ -0.78
CLK3P2-201ENST00000427566 LINC00526Q96FQ7 95 aa10.16□□□□□ -0.78
CLK3P2-201ENST00000427566 CDKN2A-AS1Q9UH64 79 aa10.16□□□□□ -0.78
CLK3P2-201ENST00000427566 IGHV3-64A0A075B6Q5 118 aa10.15□□□□□ -0.78
CLK3P2-201ENST00000427566 Q5VSD8 79 aa10.15□□□□□ -0.78
CLK3P2-201ENST00000427566 IGHV3OR16-9A0A0B4J2B5 98 aa10.14□□□□□ -0.79
CLK3P2-201ENST00000427566 A0A1B0GWB2 263 aa10.14□□□□□ -0.79
CLK3P2-201ENST00000427566 SPINK8P0C7L1 97 aa10.14□□□□□ -0.79
CLK3P2-201ENST00000427566 NHP2Q9NX24 153 aaKnown RBP10.14□□□□□ -0.79
CLK3P2-201ENST00000427566 IGLV5-39A0A0G2JS06 123 aa10.13□□□□□ -0.79
CLK3P2-201ENST00000427566 COX7A2LO14548 114 aa10.13□□□□□ -0.79
CLK3P2-201ENST00000427566 UBE2V1Q13404 147 aa10.13□□□□□ -0.79
CLK3P2-201ENST00000427566 VAMP3Q15836 100 aa10.13□□□□□ -0.79
CLK3P2-201ENST00000427566 CFAP161Q6P656 301 aa10.13□□□□□ -0.79
CLK3P2-201ENST00000427566 GVQW2A0A096LPI5 108 aaPredicted RBP10.12□□□□□ -0.79
CLK3P2-201ENST00000427566 TMEM238C9JI98 176 aa10.12□□□□□ -0.79
CLK3P2-201ENST00000427566 Q6ZSA8 131 aa10.12□□□□□ -0.79
CLK3P2-201ENST00000427566 NDUFA12Q9UI09 145 aa10.12□□□□□ -0.79
CLK3P2-201ENST00000427566 A0A0J9YXY3 114 aa10.11□□□□□ -0.79
CLK3P2-201ENST00000427566 FAM229AH3BQW9 127 aa10.11□□□□□ -0.79
CLK3P2-201ENST00000427566 MALP21145 153 aa10.11□□□□□ -0.79
CLK3P2-201ENST00000427566 CNBPP62633 177 aaKnown RBP10.11□□□□□ -0.79
CLK3P2-201ENST00000427566 DNAH8Q96JB1 4490 aa10.11□□□□□ -0.79
CLK3P2-201ENST00000427566 SCXQ7RTU7 201 aa10.1□□□□□ -0.79
CLK3P2-201ENST00000427566 C9orf163Q8N9P6 203 aa10.1□□□□□ -0.79
CLK3P2-201ENST00000427566 RAB37Q96AX2 223 aa10.1□□□□□ -0.79
CLK3P2-201ENST00000427566 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.1□□□□□ -0.79
CLK3P2-201ENST00000427566 SMIM1B2RUZ4 78 aa10.1□□□□□ -0.79
CLK3P2-201ENST00000427566 H3BUT2 72 aa10.09□□□□□ -0.79
CLK3P2-201ENST00000427566 NDUFA1O15239 70 aa10.09□□□□□ -0.79
CLK3P2-201ENST00000427566 TIMM17BO60830 172 aa10.09□□□□□ -0.79
CLK3P2-201ENST00000427566 PCLOQ9Y6V0 5065 aa10.08□□□□□ -0.8
CLK3P2-201ENST00000427566 A0A087WZ39 114 aa10.07□□□□□ -0.8
CLK3P2-201ENST00000427566 A0A1W2PPM0 123 aa10.07□□□□□ -0.8
CLK3P2-201ENST00000427566 ZNF561-AS1K7EIQ3 104 aa10.07□□□□□ -0.8
CLK3P2-201ENST00000427566 K7ERJ3 54 aa10.07□□□□□ -0.8
CLK3P2-201ENST00000427566 SDIM1Q6ZPB5 146 aa10.07□□□□□ -0.8
CLK3P2-201ENST00000427566 SPANXDQ9BXN6 97 aa10.07□□□□□ -0.8
CLK3P2-201ENST00000427566 SPANXCQ9NY87 97 aa10.07□□□□□ -0.8
CLK3P2-201ENST00000427566 PANO1I0J062 215 aa10.06□□□□□ -0.8
CLK3P2-201ENST00000427566 INAFM2P0DMQ5 153 aa10.06□□□□□ -0.8
CLK3P2-201ENST00000427566 GTF2H5Q6ZYL4 71 aa10.06□□□□□ -0.8
CLK3P2-201ENST00000427566 LINC00528Q8N1L1 170 aa10.06□□□□□ -0.8
CLK3P2-201ENST00000427566 CIRBP-AS1Q8TBR5 109 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms