RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 RAB19A4D1S5 217 aa4.89□□□□□ -1.63
LSG1-202ENST00000427461 IGKV2D-28P01615 120 aa4.89□□□□□ -1.63
LSG1-202ENST00000427461 FCER1GP30273 86 aa4.89□□□□□ -1.63
LSG1-202ENST00000427461 CENPWQ5EE01 88 aa4.89□□□□□ -1.63
LSG1-202ENST00000427461 AKR1C8PQ5T2L2 129 aa4.89□□□□□ -1.63
LSG1-202ENST00000427461 KRTAP4-12Q9BQ66 201 aa4.89□□□□□ -1.63
LSG1-202ENST00000427461 BORCS7-ASMTA0A0B4J1R7 106 aa4.88□□□□□ -1.63
LSG1-202ENST00000427461 TEX46H3BTG2 121 aa4.88□□□□□ -1.63
LSG1-202ENST00000427461 RPL39P62891 51 aaKnown RBP4.88□□□□□ -1.63
LSG1-202ENST00000427461 UQCC3Q6UW78 93 aa4.88□□□□□ -1.63
LSG1-202ENST00000427461 SMIM15Q7Z3B0 74 aa4.88□□□□□ -1.63
LSG1-202ENST00000427461 TGIF2-C20orf24A0A0A6YYL0 155 aa4.87□□□□□ -1.63
LSG1-202ENST00000427461 C9orf92A6NGG3 77 aa4.87□□□□□ -1.63
LSG1-202ENST00000427461 TMEM238C9JI98 176 aa4.87□□□□□ -1.63
LSG1-202ENST00000427461 BLOC1S1P78537 153 aa4.87□□□□□ -1.63
LSG1-202ENST00000427461 SMAGPQ0VAQ4 97 aa4.87□□□□□ -1.63
LSG1-202ENST00000427461 FAM19A2Q8N3H0 131 aa4.87□□□□□ -1.63
LSG1-202ENST00000427461 SPRR4Q96PI1 79 aa4.87□□□□□ -1.63
LSG1-202ENST00000427461 TIMM21Q9BVV7 248 aa4.87□□□□□ -1.63
LSG1-202ENST00000427461 IFITM10A6NMD0 228 aa4.86□□□□□ -1.63
LSG1-202ENST00000427461 CBLN2Q8IUK8 224 aa4.86□□□□□ -1.63
LSG1-202ENST00000427461 HIGD2AQ9BW72 106 aa4.86□□□□□ -1.63
LSG1-202ENST00000427461 TOMM7Q9P0U1 55 aa4.86□□□□□ -1.63
LSG1-202ENST00000427461 MUC12Q9UKN1 5478 aa4.85□□□□□ -1.63
LSG1-202ENST00000427461 TMEM218A2RU14 115 aa4.85□□□□□ -1.63
LSG1-202ENST00000427461 SMKR1H3BMG3 65 aa4.85□□□□□ -1.63
LSG1-202ENST00000427461 VCYO14598 125 aa4.85□□□□□ -1.63
LSG1-202ENST00000427461 SLC25A20O43772 301 aa4.85□□□□□ -1.63
LSG1-202ENST00000427461 C10orf91Q5T1B1 145 aa4.85□□□□□ -1.63
LSG1-202ENST00000427461 TMEM126AQ9H061 195 aa4.85□□□□□ -1.63
LSG1-202ENST00000427461 UMAD1C9J7I0 102 aa4.84□□□□□ -1.63
LSG1-202ENST00000427461 CKS1BP61024 79 aa4.84□□□□□ -1.63
LSG1-202ENST00000427461 HBBP68871 147 aa4.84□□□□□ -1.63
LSG1-202ENST00000427461 KRTAP19-6Q3LI70 58 aa4.84□□□□□ -1.63
LSG1-202ENST00000427461 Q6Q795 121 aa4.84□□□□□ -1.63
LSG1-202ENST00000427461 TRBV20OR9-2A0A075B6H5 130 aa4.83□□□□□ -1.64
LSG1-202ENST00000427461 IGLV5-37A0A075B6J1 123 aa4.83□□□□□ -1.64
LSG1-202ENST00000427461 MT2AP02795 61 aa4.83□□□□□ -1.64
LSG1-202ENST00000427461 PRSS2P07478 247 aa4.83□□□□□ -1.64
LSG1-202ENST00000427461 GNG4P50150 75 aa4.83□□□□□ -1.64
LSG1-202ENST00000427461 NKAPP1Q8N9T2 125 aa4.83□□□□□ -1.64
LSG1-202ENST00000427461 SFT2D1Q8WV19 159 aa4.83□□□□□ -1.64
LSG1-202ENST00000427461 M0R378 163 aa4.82□□□□□ -1.64
LSG1-202ENST00000427461 APOC3P02656 99 aa4.82□□□□□ -1.64
LSG1-202ENST00000427461 RAB4AP20338 218 aa4.82□□□□□ -1.64
LSG1-202ENST00000427461 RPS29P62273 56 aaKnown RBP4.82□□□□□ -1.64
LSG1-202ENST00000427461 C6orf226Q5I0X4 101 aa4.82□□□□□ -1.64
LSG1-202ENST00000427461 C11orf52Q96A22 123 aa4.82□□□□□ -1.64
LSG1-202ENST00000427461 TMEM18Q96B42 140 aa4.82□□□□□ -1.64
LSG1-202ENST00000427461 SEC11CQ9BY50 192 aa4.82□□□□□ -1.64
LSG1-202ENST00000427461 KRTAP9-3Q9BYQ3 159 aa4.82□□□□□ -1.64
LSG1-202ENST00000427461 C9JQL5 133 aa4.81□□□□□ -1.64
LSG1-202ENST00000427461 MT1FP04733 61 aa4.81□□□□□ -1.64
LSG1-202ENST00000427461 SUMO2P61956 95 aaKnown RBP4.81□□□□□ -1.64
LSG1-202ENST00000427461 CCL20P78556 96 aa4.81□□□□□ -1.64
LSG1-202ENST00000427461 MRPS36P82909 103 aaKnown RBP4.81□□□□□ -1.64
LSG1-202ENST00000427461 PEA15Q15121 130 aa4.81□□□□□ -1.64
LSG1-202ENST00000427461 AMN1Q8IY45 258 aa4.81□□□□□ -1.64
LSG1-202ENST00000427461 SVBPQ8N300 66 aa4.81□□□□□ -1.64
LSG1-202ENST00000427461 FAM213BQ8TBF2 198 aa4.81□□□□□ -1.64
LSG1-202ENST00000427461 GNB1LQ9BYB4 327 aa4.81□□□□□ -1.64
LSG1-202ENST00000427461 LINC00846Q9NV44 126 aa4.81□□□□□ -1.64
LSG1-202ENST00000427461 F8W036 122 aa4.8□□□□□ -1.64
LSG1-202ENST00000427461 ADCYAP1P18509 176 aa4.8□□□□□ -1.64
LSG1-202ENST00000427461 MOBPQ13875 183 aa4.8□□□□□ -1.64
LSG1-202ENST00000427461 NRACQ8N912 160 aa4.8□□□□□ -1.64
LSG1-202ENST00000427461 MBD3L1Q8WWY6 194 aa4.8□□□□□ -1.64
LSG1-202ENST00000427461 ALKBH7Q9BT30 221 aaPredicted RBP4.8□□□□□ -1.64
LSG1-202ENST00000427461 SPANXA1Q9NS26 97 aa4.8□□□□□ -1.64
LSG1-202ENST00000427461 F8VRH5 84 aa4.79□□□□□ -1.64
LSG1-202ENST00000427461 SNAPINO95295 136 aa4.79□□□□□ -1.64
LSG1-202ENST00000427461 FAM74A3Q4VXF1 159 aa4.79□□□□□ -1.64
LSG1-202ENST00000427461 Q8IZM0 81 aa4.79□□□□□ -1.64
LSG1-202ENST00000427461 SMIM12Q96EX1 92 aa4.79□□□□□ -1.64
LSG1-202ENST00000427461 IGLV9-49A0A0B4J1Y8 123 aa4.78□□□□□ -1.64
LSG1-202ENST00000427461 K7EN84 100 aa4.78□□□□□ -1.64
LSG1-202ENST00000427461 ZC2HC1BQ5TFG8 222 aa4.78□□□□□ -1.64
LSG1-202ENST00000427461 Q6ZN92 141 aa4.78□□□□□ -1.64
LSG1-202ENST00000427461 LINC01561Q8N1V8 128 aa4.78□□□□□ -1.64
LSG1-202ENST00000427461 TMEM191AQ9H0A3 160 aa4.78□□□□□ -1.64
LSG1-202ENST00000427461 RAB5BP61020 215 aa4.77□□□□□ -1.65
LSG1-202ENST00000427461 EIF5A2Q9GZV4 153 aaKnown RBP4.77□□□□□ -1.65
LSG1-202ENST00000427461 BIN3Q9NQY0 253 aa4.77□□□□□ -1.65
LSG1-202ENST00000427461 GNG13Q9P2W3 67 aa4.77□□□□□ -1.65
LSG1-202ENST00000427461 ZNF706Q9Y5V0 76 aaPredicted RBP4.77□□□□□ -1.65
LSG1-202ENST00000427461 IGLV4-3A0A075B6K6 122 aa4.76□□□□□ -1.65
LSG1-202ENST00000427461 LOC105371267A0A1B0GV96 52 aa4.76□□□□□ -1.65
LSG1-202ENST00000427461 IGLV6-57P01721 117 aa4.76□□□□□ -1.65
LSG1-202ENST00000427461 SRP19P09132 144 aaKnown RBP4.76□□□□□ -1.65
LSG1-202ENST00000427461 SMCO4Q9NRQ5 59 aa4.76□□□□□ -1.65
LSG1-202ENST00000427461 TCAPO15273 167 aa4.75□□□□□ -1.65
LSG1-202ENST00000427461 TAGLN2P37802 199 aaKnown RBP4.75□□□□□ -1.65
LSG1-202ENST00000427461 COLCA2A8K830 154 aa4.74□□□□□ -1.65
LSG1-202ENST00000427461 PPP1R2P9O14990 202 aa4.74□□□□□ -1.65
LSG1-202ENST00000427461 VPREB1P12018 145 aa4.74□□□□□ -1.65
LSG1-202ENST00000427461 RPL37P61927 97 aaKnown RBP4.74□□□□□ -1.65
LSG1-202ENST00000427461 RHEBQ15382 184 aa4.74□□□□□ -1.65
LSG1-202ENST00000427461 FAM231DQ6ZW35 169 aa4.74□□□□□ -1.65
LSG1-202ENST00000427461 SSBP3-AS1Q7Z2R9 100 aa4.74□□□□□ -1.65
LSG1-202ENST00000427461 OCC1Q8TAD7 63 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms