RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 ALKBH7Q9BT30 221 aaPredicted RBP8.49□□□□□ -1.05
PDAP1-202ENST00000426447 F8W036 122 aa8.48□□□□□ -1.05
PDAP1-202ENST00000426447 SRP19P09132 144 aaKnown RBP8.48□□□□□ -1.05
PDAP1-202ENST00000426447 LINC01547P58512 204 aaPredicted RBP8.48□□□□□ -1.05
PDAP1-202ENST00000426447 LINC00167Q96N53 147 aa8.48□□□□□ -1.05
PDAP1-202ENST00000426447 MUC17Q685J3 4493 aa8.48□□□□□ -1.05
PDAP1-202ENST00000426447 GAGE10A6NGK3 116 aa8.47□□□□□ -1.05
PDAP1-202ENST00000426447 FAM229BQ4G0N7 80 aa8.47□□□□□ -1.05
PDAP1-202ENST00000426447 Q8IZM0 81 aa8.47□□□□□ -1.05
PDAP1-202ENST00000426447 PPDPFQ9H3Y8 114 aa8.47□□□□□ -1.05
PDAP1-202ENST00000426447 PPBPP02775 128 aa8.46□□□□□ -1.06
PDAP1-202ENST00000426447 S100A8P05109 93 aa8.46□□□□□ -1.06
PDAP1-202ENST00000426447 LCE2DQ5TA82 110 aaPredicted RBP8.46□□□□□ -1.06
PDAP1-202ENST00000426447 VCX2Q9H322 139 aa8.46□□□□□ -1.06
PDAP1-202ENST00000426447 SMIM27A0A1W2PRY6 76 aa8.45□□□□□ -1.06
PDAP1-202ENST00000426447 F8VRH5 84 aa8.45□□□□□ -1.06
PDAP1-202ENST00000426447 ZC2HC1BQ5TFG8 222 aa8.45□□□□□ -1.06
PDAP1-202ENST00000426447 MRPL54Q6P161 138 aaKnown RBP8.45□□□□□ -1.06
PDAP1-202ENST00000426447 CRCT1Q9UGL9 99 aa8.45□□□□□ -1.06
PDAP1-202ENST00000426447 TMEM218A2RU14 115 aa8.44□□□□□ -1.06
PDAP1-202ENST00000426447 CTAG1AP78358 180 aa8.44□□□□□ -1.06
PDAP1-202ENST00000426447 ADIRFQ15847 76 aa8.44□□□□□ -1.06
PDAP1-202ENST00000426447 RPL23P62829 140 aaKnown RBP8.43□□□□□ -1.06
PDAP1-202ENST00000426447 TMEM136Q6ZRR5 245 aa8.43□□□□□ -1.06
PDAP1-202ENST00000426447 ORMDL3Q8N138 153 aa8.43□□□□□ -1.06
PDAP1-202ENST00000426447 LINC00337Q8N6G1 96 aa8.43□□□□□ -1.06
PDAP1-202ENST00000426447 LOC389332A0A1B0GUA5 103 aa8.42□□□□□ -1.06
PDAP1-202ENST00000426447 PRELID3AQ96N28 172 aa8.42□□□□□ -1.06
PDAP1-202ENST00000426447 CYSLTR1Q9Y271 337 aa8.42□□□□□ -1.06
PDAP1-202ENST00000426447 ADCYAP1P18509 176 aa8.41□□□□□ -1.06
PDAP1-202ENST00000426447 PNRC1Q12796 327 aaPredicted RBP8.41□□□□□ -1.06
PDAP1-202ENST00000426447 KRTAP13-1Q8IUC0 172 aa8.41□□□□□ -1.06
PDAP1-202ENST00000426447 NKAPP1Q8N9T2 125 aa8.41□□□□□ -1.06
PDAP1-202ENST00000426447 AMELXQ99217 191 aa8.41□□□□□ -1.06
PDAP1-202ENST00000426447 CXCL5P42830 114 aa8.4□□□□□ -1.06
PDAP1-202ENST00000426447 HERVK_113P63121 156 aa8.4□□□□□ -1.06
PDAP1-202ENST00000426447 SEC11AP67812 179 aa8.4□□□□□ -1.06
PDAP1-202ENST00000426447 C10orf91Q5T1B1 145 aa8.4□□□□□ -1.06
PDAP1-202ENST00000426447 C2orf66Q6UXQ4 117 aa8.4□□□□□ -1.06
PDAP1-202ENST00000426447 SEC11CQ9BY50 192 aa8.4□□□□□ -1.06
PDAP1-202ENST00000426447 GEMIN7Q9H840 131 aaKnown RBP8.4□□□□□ -1.06
PDAP1-202ENST00000426447 CDKN2A-AS1Q9UH64 79 aa8.4□□□□□ -1.06
PDAP1-202ENST00000426447 NAT8Q9UHE5 227 aa8.39□□□□□ -1.07
PDAP1-202ENST00000426447 IGKV2-28A0A075B6P5 120 aa8.38□□□□□ -1.07
PDAP1-202ENST00000426447 A0A1B0GXF2 115 aa8.38□□□□□ -1.07
PDAP1-202ENST00000426447 IGKV2D-28P01615 120 aa8.38□□□□□ -1.07
PDAP1-202ENST00000426447 RAB5BP61020 215 aa8.38□□□□□ -1.07
PDAP1-202ENST00000426447 MAP1LC3AQ9H492 121 aa8.38□□□□□ -1.07
PDAP1-202ENST00000426447 ATP6V1G1O75348 118 aa8.37□□□□□ -1.07
PDAP1-202ENST00000426447 PRLHP81277 87 aa8.37□□□□□ -1.07
PDAP1-202ENST00000426447 SPAG11AQ6PDA7 123 aa8.37□□□□□ -1.07
PDAP1-202ENST00000426447 FAM19A3Q7Z5A8 133 aa8.37□□□□□ -1.07
PDAP1-202ENST00000426447 FAM19A1Q7Z5A9 133 aa8.37□□□□□ -1.07
PDAP1-202ENST00000426447 IGLV5-37A0A075B6J1 123 aa8.36□□□□□ -1.07
PDAP1-202ENST00000426447 PRSS47A8MTI9 375 aa8.36□□□□□ -1.07
PDAP1-202ENST00000426447 NPSP0C0P6 89 aa8.36□□□□□ -1.07
PDAP1-202ENST00000426447 ASB16-AS1Q495Z4 193 aa8.36□□□□□ -1.07
PDAP1-202ENST00000426447 C4orf48Q5BLP8 95 aa8.36□□□□□ -1.07
PDAP1-202ENST00000426447 PAPPA-AS1Q5QFB9 102 aa8.36□□□□□ -1.07
PDAP1-202ENST00000426447 FP248Q71RG6 208 aaPredicted RBP8.36□□□□□ -1.07
PDAP1-202ENST00000426447 FSIP2Q5CZC0 6907 aa8.36□□□□□ -1.07
PDAP1-202ENST00000426447 ORMDL2Q53FV1 153 aa8.35□□□□□ -1.07
PDAP1-202ENST00000426447 C3orf22Q8N5N4 141 aa8.35□□□□□ -1.07
PDAP1-202ENST00000426447 Q8N8P6 123 aa8.35□□□□□ -1.07
PDAP1-202ENST00000426447 LAMTOR2Q9Y2Q5 125 aa8.35□□□□□ -1.07
PDAP1-202ENST00000426447 IGIPA6NJ69 53 aa8.34□□□□□ -1.07
PDAP1-202ENST00000426447 SCO1O75880 301 aa8.34□□□□□ -1.07
PDAP1-202ENST00000426447 APOC3P02656 99 aa8.34□□□□□ -1.07
PDAP1-202ENST00000426447 COX7B2Q8TF08 81 aa8.34□□□□□ -1.07
PDAP1-202ENST00000426447 S100A1P23297 94 aa8.33□□□□□ -1.08
PDAP1-202ENST00000426447 SEC61BP60468 96 aaKnown RBP8.33□□□□□ -1.08
PDAP1-202ENST00000426447 SVBPQ8N300 66 aa8.33□□□□□ -1.08
PDAP1-202ENST00000426447 PDZD11Q5EBL8 140 aa8.32□□□□□ -1.08
PDAP1-202ENST00000426447 ATP5L2Q7Z4Y8 100 aa8.32□□□□□ -1.08
PDAP1-202ENST00000426447 PLEKHB2Q96CS7 222 aa8.32□□□□□ -1.08
PDAP1-202ENST00000426447 SMIM1B2RUZ4 78 aa8.31□□□□□ -1.08
PDAP1-202ENST00000426447 TMEM238C9JI98 176 aa8.31□□□□□ -1.08
PDAP1-202ENST00000426447 SNAPINO95295 136 aa8.31□□□□□ -1.08
PDAP1-202ENST00000426447 KRTAP13-3Q3SY46 172 aa8.31□□□□□ -1.08
PDAP1-202ENST00000426447 CBLN2Q8IUK8 224 aa8.31□□□□□ -1.08
PDAP1-202ENST00000426447 TMEM126AQ9H061 195 aa8.31□□□□□ -1.08
PDAP1-202ENST00000426447 K7EMI3 77 aa8.3□□□□□ -1.08
PDAP1-202ENST00000426447 G0S2P27469 103 aa8.3□□□□□ -1.08
PDAP1-202ENST00000426447 KRTAP4-1Q9BYQ7 146 aa8.3□□□□□ -1.08
PDAP1-202ENST00000426447 RHEBQ15382 184 aa8.29□□□□□ -1.08
PDAP1-202ENST00000426447 HIGD2AQ9BW72 106 aa8.29□□□□□ -1.08
PDAP1-202ENST00000426447 GNB1LQ9BYB4 327 aa8.29□□□□□ -1.08
PDAP1-202ENST00000426447 ATP5LO75964 103 aa8.28□□□□□ -1.08
PDAP1-202ENST00000426447 MT-ND4LP03901 98 aa8.28□□□□□ -1.08
PDAP1-202ENST00000426447 PFN2P35080 140 aa8.28□□□□□ -1.08
PDAP1-202ENST00000426447 ANAPC16Q96DE5 110 aa8.28□□□□□ -1.08
PDAP1-202ENST00000426447 TIMM17AQ99595 171 aa8.28□□□□□ -1.08
PDAP1-202ENST00000426447 TINCRA0A1B0GVN0 87 aa8.27□□□□□ -1.09
PDAP1-202ENST00000426447 M0R378 163 aa8.27□□□□□ -1.09
PDAP1-202ENST00000426447 RPL24P83731 157 aaKnown RBP8.27□□□□□ -1.09
PDAP1-202ENST00000426447 NXT2Q9NPJ8 142 aaKnown RBP8.27□□□□□ -1.09
PDAP1-202ENST00000426447 SPINK8P0C7L1 97 aa8.26□□□□□ -1.09
PDAP1-202ENST00000426447 DAND5Q8N907 189 aa8.26□□□□□ -1.09
PDAP1-202ENST00000426447 TOMM6Q96B49 74 aa8.26□□□□□ -1.09
PDAP1-202ENST00000426447 SCGB3A1Q96QR1 104 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms