RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 Q8IZM0 81 aa11.13□□□□□ -0.63
IGHV3-47-201ENST00000425060 PMVKQ15126 192 aa11.12□□□□□ -0.63
IGHV3-47-201ENST00000425060 TOMM7Q9P0U1 55 aa11.11□□□□□ -0.63
IGHV3-47-201ENST00000425060 C6orf226Q5I0X4 101 aa11.1□□□□□ -0.63
IGHV3-47-201ENST00000425060 PACRGQ96M98 296 aaPredicted RBP11.1□□□□□ -0.63
IGHV3-47-201ENST00000425060 SMIM1B2RUZ4 78 aa11.09□□□□□ -0.63
IGHV3-47-201ENST00000425060 NDUFC2-KCTD14E9PQ53 114 aa11.09□□□□□ -0.63
IGHV3-47-201ENST00000425060 PRSS2P07478 247 aa11.09□□□□□ -0.63
IGHV3-47-201ENST00000425060 GAGE2EQ4V326 116 aa11.09□□□□□ -0.63
IGHV3-47-201ENST00000425060 PDZD11Q5EBL8 140 aa11.09□□□□□ -0.63
IGHV3-47-201ENST00000425060 SLC7A5P1Q8MH63 180 aa11.09□□□□□ -0.63
IGHV3-47-201ENST00000425060 LINC00469Q8N7U9 141 aa11.09□□□□□ -0.63
IGHV3-47-201ENST00000425060 GAGE2DQ9UEU5 116 aa11.09□□□□□ -0.63
IGHV3-47-201ENST00000425060 FAM168BA1KXE4 195 aa11.08□□□□□ -0.64
IGHV3-47-201ENST00000425060 HBDP02042 147 aa11.08□□□□□ -0.64
IGHV3-47-201ENST00000425060 PHF5AQ7RTV0 110 aaKnown RBP11.08□□□□□ -0.64
IGHV3-47-201ENST00000425060 KRTAP7-1Q8IUC3 87 aa11.08□□□□□ -0.64
IGHV3-47-201ENST00000425060 CBLN2Q8IUK8 224 aa11.08□□□□□ -0.64
IGHV3-47-201ENST00000425060 RAB5BP61020 215 aa11.07□□□□□ -0.64
IGHV3-47-201ENST00000425060 CKS1BP61024 79 aa11.07□□□□□ -0.64
IGHV3-47-201ENST00000425060 SRSF9Q13242 221 aaKnown RBP eCLIP11.07□□□□□ -0.64
IGHV3-47-201ENST00000425060 PMCHL1Q16048 86 aa11.07□□□□□ -0.64
IGHV3-47-201ENST00000425060 C9orf129Q5T035 196 aaKnown RBP11.06□□□□□ -0.64
IGHV3-47-201ENST00000425060 F8VRH5 84 aa11.05□□□□□ -0.64
IGHV3-47-201ENST00000425060 MT1HL1P0DM35 61 aa11.05□□□□□ -0.64
IGHV3-47-201ENST00000425060 IGLC3P0DOY3 106 aa11.05□□□□□ -0.64
IGHV3-47-201ENST00000425060 CXCL5P42830 114 aa11.04□□□□□ -0.64
IGHV3-47-201ENST00000425060 PSORS1C2Q9UIG4 136 aa11.04□□□□□ -0.64
IGHV3-47-201ENST00000425060 SPINK8P0C7L1 97 aa11.03□□□□□ -0.64
IGHV3-47-201ENST00000425060 SPINK6Q6UWN8 80 aa11.03□□□□□ -0.64
IGHV3-47-201ENST00000425060 COX7B2Q8TF08 81 aa11.03□□□□□ -0.64
IGHV3-47-201ENST00000425060 ATP5LO75964 103 aa11.02□□□□□ -0.65
IGHV3-47-201ENST00000425060 FAM19A5Q7Z5A7 132 aaPredicted RBP11.02□□□□□ -0.65
IGHV3-47-201ENST00000425060 KRTAP11-1Q8IUC1 163 aa11.02□□□□□ -0.65
IGHV3-47-201ENST00000425060 CHCHD1Q96BP2 118 aaKnown RBP11.02□□□□□ -0.65
IGHV3-47-201ENST00000425060 NDUFA6P56556 154 aa11.01□□□□□ -0.65
IGHV3-47-201ENST00000425060 IGLV5-39A0A0G2JS06 123 aa11□□□□□ -0.65
IGHV3-47-201ENST00000425060 H3BRM9 83 aa11□□□□□ -0.65
IGHV3-47-201ENST00000425060 ZNF22P17026 224 aaPredicted RBP11□□□□□ -0.65
IGHV3-47-201ENST00000425060 TNXBP22105 4242 aa10.99□□□□□ -0.65
IGHV3-47-201ENST00000425060 TRGC2P03986 189 aa10.99□□□□□ -0.65
IGHV3-47-201ENST00000425060 BAGE3Q86Y29 109 aa10.99□□□□□ -0.65
IGHV3-47-201ENST00000425060 LINC01600Q96MT4 127 aa10.98□□□□□ -0.65
IGHV3-47-201ENST00000425060 XAGE1AQ9HD64 81 aa10.98□□□□□ -0.65
IGHV3-47-201ENST00000425060 C11orf86A6NJI1 115 aa10.97□□□□□ -0.65
IGHV3-47-201ENST00000425060 M0QXV9 152 aa10.97□□□□□ -0.65
IGHV3-47-201ENST00000425060 C1orf137Q5JT78 98 aa10.97□□□□□ -0.65
IGHV3-47-201ENST00000425060 SERTAD4-AS1Q5TG53 156 aa10.97□□□□□ -0.65
IGHV3-47-201ENST00000425060 COLCA2A8K830 154 aa10.96□□□□□ -0.65
IGHV3-47-201ENST00000425060 ODF1Q14990 250 aa10.96□□□□□ -0.65
IGHV3-47-201ENST00000425060 HMCN2Q8NDA2 5059 aa10.95□□□□□ -0.66
IGHV3-47-201ENST00000425060 TRAV12-1A0A0B4J245 112 aa10.94□□□□□ -0.66
IGHV3-47-201ENST00000425060 LINC00310P59036 64 aa10.94□□□□□ -0.66
IGHV3-47-201ENST00000425060 IFI27L1Q96BM0 104 aa10.94□□□□□ -0.66
IGHV3-47-201ENST00000425060 C22orf24Q9Y442 160 aa10.94□□□□□ -0.66
IGHV3-47-201ENST00000425060 IGLV7-43P04211 117 aa10.93□□□□□ -0.66
IGHV3-47-201ENST00000425060 FAM19A2Q8N3H0 131 aa10.93□□□□□ -0.66
IGHV3-47-201ENST00000425060 CHTOPQ9Y3Y2 248 aaKnown RBP10.93□□□□□ -0.66
IGHV3-47-201ENST00000425060 HSBP1O75506 76 aa10.92□□□□□ -0.66
IGHV3-47-201ENST00000425060 REG3GQ6UW15 175 aa10.92□□□□□ -0.66
IGHV3-47-201ENST00000425060 KRTAP10-8P60410 259 aa10.91□□□□□ -0.66
IGHV3-47-201ENST00000425060 UBE2BP63146 152 aa10.91□□□□□ -0.66
IGHV3-47-201ENST00000425060 TMEM170BQ5T4T1 132 aa10.91□□□□□ -0.66
IGHV3-47-201ENST00000425060 TP73-AS1Q9UF72 201 aa10.9□□□□□ -0.66
IGHV3-47-201ENST00000425060 PLA2G2DQ9UNK4 145 aa10.9□□□□□ -0.66
IGHV3-47-201ENST00000425060 SERF1AO75920 110 aa10.89□□□□□ -0.67
IGHV3-47-201ENST00000425060 TMEM223A0PJW6 202 aa10.88□□□□□ -0.67
IGHV3-47-201ENST00000425060 NUPR1O60356 82 aa10.88□□□□□ -0.67
IGHV3-47-201ENST00000425060 LBHQ53QV2 105 aaPredicted RBP10.87□□□□□ -0.67
IGHV3-47-201ENST00000425060 ZNF625Q96I27 306 aaPredicted RBP10.87□□□□□ -0.67
IGHV3-47-201ENST00000425060 IGLV5-37A0A075B6J1 123 aa10.86□□□□□ -0.67
IGHV3-47-201ENST00000425060 MRPL55Q7Z7F7 128 aaKnown RBP10.86□□□□□ -0.67
IGHV3-47-201ENST00000425060 ERG28Q9UKR5 140 aa10.86□□□□□ -0.67
IGHV3-47-201ENST00000425060 PFN2P35080 140 aa10.85□□□□□ -0.67
IGHV3-47-201ENST00000425060 COX17Q14061 63 aa10.85□□□□□ -0.67
IGHV3-47-201ENST00000425060 DIRC1Q969H9 104 aa10.85□□□□□ -0.67
IGHV3-47-201ENST00000425060 H0Y9J4 135 aa10.84□□□□□ -0.67
IGHV3-47-201ENST00000425060 SCO1O75880 301 aa10.84□□□□□ -0.67
IGHV3-47-201ENST00000425060 LEPROTL1O95214 131 aa10.84□□□□□ -0.67
IGHV3-47-201ENST00000425060 SFTA2Q6UW10 78 aa10.84□□□□□ -0.67
IGHV3-47-201ENST00000425060 LINC00167Q96N53 147 aa10.84□□□□□ -0.67
IGHV3-47-201ENST00000425060 SND1-IT1Q9HBX3 110 aa10.82□□□□□ -0.68
IGHV3-47-201ENST00000425060 ZNF861PO60384 105 aa10.8□□□□□ -0.68
IGHV3-47-201ENST00000425060 RPL37AP8A6NKH3 93 aa10.79□□□□□ -0.68
IGHV3-47-201ENST00000425060 KRTAP1-4P0C5Y4 121 aa10.79□□□□□ -0.68
IGHV3-47-201ENST00000425060 VPREB1P12018 145 aa10.79□□□□□ -0.68
IGHV3-47-201ENST00000425060 HSPB8Q9UJY1 196 aa10.79□□□□□ -0.68
IGHV3-47-201ENST00000425060 H0Y8G0 127 aa10.78□□□□□ -0.68
IGHV3-47-201ENST00000425060 FABP4P15090 132 aa10.78□□□□□ -0.68
IGHV3-47-201ENST00000425060 Q8NDZ9 215 aa10.78□□□□□ -0.68
IGHV3-47-201ENST00000425060 GAGE10A6NGK3 116 aa10.77□□□□□ -0.69
IGHV3-47-201ENST00000425060 HIST1H2BKO60814 126 aa10.77□□□□□ -0.69
IGHV3-47-201ENST00000425060 HIST1H2BJP06899 126 aa10.77□□□□□ -0.69
IGHV3-47-201ENST00000425060 HIST1H2BOP23527 126 aa10.77□□□□□ -0.69
IGHV3-47-201ENST00000425060 HIST1H2BBP33778 126 aa10.77□□□□□ -0.69
IGHV3-47-201ENST00000425060 HIST1H2BDP58876 126 aa10.77□□□□□ -0.69
IGHV3-47-201ENST00000425060 HIST1H2BCP62807 126 aa10.77□□□□□ -0.69
IGHV3-47-201ENST00000425060 HIST2H2BEQ16778 126 aa10.77□□□□□ -0.69
IGHV3-47-201ENST00000425060 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.77□□□□□ -0.69
IGHV3-47-201ENST00000425060 NKAPP1Q8N9T2 125 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms