RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 E9PLD3 99 aa8.79□□□□□ -1
PRPF39-202ENST00000424478 PRSS2P07478 247 aa8.79□□□□□ -1
PRPF39-202ENST00000424478 HERVK_113P61574 105 aa8.78□□□□□ -1
PRPF39-202ENST00000424478 COX11Q9Y6N1 276 aa8.78□□□□□ -1
PRPF39-202ENST00000424478 NTN5Q8WTR8 489 aaPredicted RBP8.78□□□□□ -1
PRPF39-202ENST00000424478 APOMO95445 188 aa8.77□□□□□ -1
PRPF39-202ENST00000424478 Q6ZRU5 148 aa8.77□□□□□ -1
PRPF39-202ENST00000424478 DNAH5Q8TE73 4624 aa8.77□□□□□ -1
PRPF39-202ENST00000424478 LEPROTO15243 131 aa8.77□□□□□ -1.01
PRPF39-202ENST00000424478 CFAP161Q6P656 301 aa8.77□□□□□ -1.01
PRPF39-202ENST00000424478 PLEKHB2Q96CS7 222 aa8.77□□□□□ -1.01
PRPF39-202ENST00000424478 LGALS3P17931 250 aaKnown RBP8.77□□□□□ -1.01
PRPF39-202ENST00000424478 CAMK2N2Q96S95 79 aa8.77□□□□□ -1.01
PRPF39-202ENST00000424478 CKS1BP61024 79 aa8.76□□□□□ -1.01
PRPF39-202ENST00000424478 NDUFA12Q9UI09 145 aa8.76□□□□□ -1.01
PRPF39-202ENST00000424478 SMIM6P0DI80 62 aa8.76□□□□□ -1.01
PRPF39-202ENST00000424478 KRTAP10-2P60368 255 aa8.76□□□□□ -1.01
PRPF39-202ENST00000424478 GVQW2A0A096LPI5 108 aaPredicted RBP8.75□□□□□ -1.01
PRPF39-202ENST00000424478 DAND5Q8N907 189 aa8.75□□□□□ -1.01
PRPF39-202ENST00000424478 ZNF815PA8K554 130 aa8.75□□□□□ -1.01
PRPF39-202ENST00000424478 Q8N814 137 aa8.75□□□□□ -1.01
PRPF39-202ENST00000424478 PFN2P35080 140 aa8.75□□□□□ -1.01
PRPF39-202ENST00000424478 Q8IZM0 81 aa8.75□□□□□ -1.01
PRPF39-202ENST00000424478 LINC00518Q8N0U6 118 aa8.74□□□□□ -1.01
PRPF39-202ENST00000424478 C6orf48Q9UBA6 75 aa8.74□□□□□ -1.01
PRPF39-202ENST00000424478 NPC2P61916 151 aa8.73□□□□□ -1.01
PRPF39-202ENST00000424478 S100A12P80511 92 aa8.73□□□□□ -1.01
PRPF39-202ENST00000424478 SYCNQ0VAF6 134 aa8.72□□□□□ -1.01
PRPF39-202ENST00000424478 NDUFA1O15239 70 aa8.71□□□□□ -1.02
PRPF39-202ENST00000424478 SMIM13P0DJ93 91 aa8.71□□□□□ -1.02
PRPF39-202ENST00000424478 LINC01561Q8N1V8 128 aa8.71□□□□□ -1.02
PRPF39-202ENST00000424478 CARD19Q96LW7 228 aa8.71□□□□□ -1.02
PRPF39-202ENST00000424478 MYMXA0A1B0GTQ4 84 aa8.7□□□□□ -1.02
PRPF39-202ENST00000424478 MEIG1Q5JSS6 88 aa8.7□□□□□ -1.02
PRPF39-202ENST00000424478 A0A0J9YXY3 114 aa8.7□□□□□ -1.02
PRPF39-202ENST00000424478 SCGB1D4Q6XE38 83 aa8.7□□□□□ -1.02
PRPF39-202ENST00000424478 EIF4EBP3O60516 100 aaPredicted RBP8.69□□□□□ -1.02
PRPF39-202ENST00000424478 COX8AP10176 69 aa8.69□□□□□ -1.02
PRPF39-202ENST00000424478 ADAMTSL4-AS1Q5T5F5 129 aa8.69□□□□□ -1.02
PRPF39-202ENST00000424478 CHTF8P0CG12 524 aa8.69□□□□□ -1.02
PRPF39-202ENST00000424478 GAGE2EQ4V326 116 aa8.69□□□□□ -1.02
PRPF39-202ENST00000424478 GAGE2DQ9UEU5 116 aa8.69□□□□□ -1.02
PRPF39-202ENST00000424478 EPPK1P58107 5090 aaKnown RBP8.68□□□□□ -1.02
PRPF39-202ENST00000424478 XAGE1AQ9HD64 81 aa8.68□□□□□ -1.02
PRPF39-202ENST00000424478 IGKV2-24A0A0C4DH68 120 aa8.68□□□□□ -1.02
PRPF39-202ENST00000424478 LINC00158P58513 81 aa8.68□□□□□ -1.02
PRPF39-202ENST00000424478 HAMPP81172 84 aa8.68□□□□□ -1.02
PRPF39-202ENST00000424478 RPL18AQ02543 176 aaKnown RBP8.67□□□□□ -1.02
PRPF39-202ENST00000424478 BOD1L2Q8IYS8 172 aa8.67□□□□□ -1.02
PRPF39-202ENST00000424478 IGLV5-52A0A0A0MRZ9 124 aa8.67□□□□□ -1.02
PRPF39-202ENST00000424478 ERG28Q9UKR5 140 aa8.67□□□□□ -1.02
PRPF39-202ENST00000424478 SLC25A34Q6PIV7 304 aa8.67□□□□□ -1.02
PRPF39-202ENST00000424478 C2orf48Q96LS8 159 aa8.67□□□□□ -1.02
PRPF39-202ENST00000424478 PANO1I0J062 215 aa8.66□□□□□ -1.02
PRPF39-202ENST00000424478 GAGE2BQ13066 116 aa8.66□□□□□ -1.02
PRPF39-202ENST00000424478 Q6ZRP5 223 aa8.66□□□□□ -1.02
PRPF39-202ENST00000424478 C14orf177Q52M58 125 aa8.66□□□□□ -1.02
PRPF39-202ENST00000424478 C2orf91Q6ZV80 131 aa8.65□□□□□ -1.02
PRPF39-202ENST00000424478 MIR7-3HGQ8N6C7 128 aa8.65□□□□□ -1.02
PRPF39-202ENST00000424478 DYNC1H1Q14204 4646 aaKnown RBP8.65□□□□□ -1.02
PRPF39-202ENST00000424478 PCP4L1A6NKN8 68 aa8.65□□□□□ -1.03
PRPF39-202ENST00000424478 EREGO14944 169 aa8.65□□□□□ -1.03
PRPF39-202ENST00000424478 LRP1BQ9NZR2 4599 aa8.65□□□□□ -1.03
PRPF39-202ENST00000424478 CNBPP62633 177 aaKnown RBP8.64□□□□□ -1.03
PRPF39-202ENST00000424478 LITAFQ99732 161 aa8.64□□□□□ -1.03
PRPF39-202ENST00000424478 A0A096LNI7 61 aa8.64□□□□□ -1.03
PRPF39-202ENST00000424478 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.64□□□□□ -1.03
PRPF39-202ENST00000424478 CXCL5P42830 114 aa8.64□□□□□ -1.03
PRPF39-202ENST00000424478 FAM168BA1KXE4 195 aa8.63□□□□□ -1.03
PRPF39-202ENST00000424478 C9orf163Q8N9P6 203 aa8.63□□□□□ -1.03
PRPF39-202ENST00000424478 Q8NDZ9 215 aa8.62□□□□□ -1.03
PRPF39-202ENST00000424478 A0A1B0GVY2 172 aa8.62□□□□□ -1.03
PRPF39-202ENST00000424478 SOSTDC1Q6X4U4 206 aa8.62□□□□□ -1.03
PRPF39-202ENST00000424478 DNAH8Q96JB1 4490 aa8.62□□□□□ -1.03
PRPF39-202ENST00000424478 TRBV30A0A0K0K1B3 111 aa8.61□□□□□ -1.03
PRPF39-202ENST00000424478 HERV-K104P63124 156 aa8.61□□□□□ -1.03
PRPF39-202ENST00000424478 PRR3P79522 188 aaKnown RBP8.61□□□□□ -1.03
PRPF39-202ENST00000424478 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.61□□□□□ -1.03
PRPF39-202ENST00000424478 KRTAP10-1P60331 282 aa8.61□□□□□ -1.03
PRPF39-202ENST00000424478 UQCR10Q9UDW1 63 aa8.61□□□□□ -1.03
PRPF39-202ENST00000424478 SDIM1Q6ZPB5 146 aa8.61□□□□□ -1.03
PRPF39-202ENST00000424478 LINC00336Q6ZUF6 198 aa8.61□□□□□ -1.03
PRPF39-202ENST00000424478 SND1-IT1Q9HBX3 110 aa8.61□□□□□ -1.03
PRPF39-202ENST00000424478 FAM30AQ9NZY2 134 aa8.61□□□□□ -1.03
PRPF39-202ENST00000424478 NDUFC2-KCTD14E9PQ53 114 aa8.6□□□□□ -1.03
PRPF39-202ENST00000424478 C9orf129Q5T035 196 aaKnown RBP8.6□□□□□ -1.03
PRPF39-202ENST00000424478 SRSF9Q13242 221 aaKnown RBP eCLIP8.59□□□□□ -1.03
PRPF39-202ENST00000424478 MIEN1Q9BRT3 115 aa8.59□□□□□ -1.03
PRPF39-202ENST00000424478 HNRNPA3P51991 378 aaKnown RBP8.59□□□□□ -1.03
PRPF39-202ENST00000424478 TSTD3H0UI37 97 aa8.59□□□□□ -1.04
PRPF39-202ENST00000424478 DPH3Q96FX2 82 aa8.59□□□□□ -1.04
PRPF39-202ENST00000424478 HIST1H4GQ99525 98 aa8.58□□□□□ -1.04
PRPF39-202ENST00000424478 CTAG1AP78358 180 aa8.58□□□□□ -1.04
PRPF39-202ENST00000424478 MUSTN1Q8IVN3 82 aa8.58□□□□□ -1.04
PRPF39-202ENST00000424478 LOC107984640A0A0U1RRK4 108 aa8.57□□□□□ -1.04
PRPF39-202ENST00000424478 DLEU1O43261 78 aa8.57□□□□□ -1.04
PRPF39-202ENST00000424478 CIRBPQ14011 172 aaKnown RBP8.57□□□□□ -1.04
PRPF39-202ENST00000424478 C16orf90A8MZG2 172 aa8.57□□□□□ -1.04
PRPF39-202ENST00000424478 GCSHP23434 173 aa8.57□□□□□ -1.04
PRPF39-202ENST00000424478 SERTAD4-AS1Q5TG53 156 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms