RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 UBE2AP49459 152 aa9.56□□□□□ -0.88
CHCHD3-202ENST00000423635 FAM19A3Q7Z5A8 133 aa9.56□□□□□ -0.88
CHCHD3-202ENST00000423635 F8VRH5 84 aa9.55□□□□□ -0.88
CHCHD3-202ENST00000423635 PPBPP02775 128 aa9.55□□□□□ -0.88
CHCHD3-202ENST00000423635 AMELXQ99217 191 aa9.55□□□□□ -0.88
CHCHD3-202ENST00000423635 C2orf88Q9BSF0 95 aa9.55□□□□□ -0.88
CHCHD3-202ENST00000423635 KRTAP4-1Q9BYQ7 146 aa9.54□□□□□ -0.88
CHCHD3-202ENST00000423635 IGLV5-37A0A075B6J1 123 aa9.53□□□□□ -0.88
CHCHD3-202ENST00000423635 F8W036 122 aa9.53□□□□□ -0.88
CHCHD3-202ENST00000423635 ZC2HC1BQ5TFG8 222 aa9.53□□□□□ -0.88
CHCHD3-202ENST00000423635 FP248Q71RG6 208 aaPredicted RBP9.53□□□□□ -0.88
CHCHD3-202ENST00000423635 GAGE10A6NGK3 116 aa9.52□□□□□ -0.89
CHCHD3-202ENST00000423635 PRSS47A8MTI9 375 aa9.52□□□□□ -0.89
CHCHD3-202ENST00000423635 SRP19P09132 144 aaKnown RBP9.52□□□□□ -0.89
CHCHD3-202ENST00000423635 C2orf66Q6UXQ4 117 aa9.52□□□□□ -0.89
CHCHD3-202ENST00000423635 LINC00337Q8N6G1 96 aa9.52□□□□□ -0.89
CHCHD3-202ENST00000423635 S100A8P05109 93 aa9.51□□□□□ -0.89
CHCHD3-202ENST00000423635 RPL23P62829 140 aaKnown RBP9.51□□□□□ -0.89
CHCHD3-202ENST00000423635 PNRC1Q12796 327 aaPredicted RBP9.51□□□□□ -0.89
CHCHD3-202ENST00000423635 KRTAP13-3Q3SY46 172 aa9.51□□□□□ -0.89
CHCHD3-202ENST00000423635 SPAG11AQ6PDA7 123 aa9.51□□□□□ -0.89
CHCHD3-202ENST00000423635 VCX2Q9H322 139 aa9.51□□□□□ -0.89
CHCHD3-202ENST00000423635 A0A1B0GXF2 115 aa9.5□□□□□ -0.89
CHCHD3-202ENST00000423635 NPSP0C0P6 89 aa9.5□□□□□ -0.89
CHCHD3-202ENST00000423635 CXCL5P42830 114 aa9.5□□□□□ -0.89
CHCHD3-202ENST00000423635 SRSF3P84103 164 aaKnown RBP9.5□□□□□ -0.89
CHCHD3-202ENST00000423635 TCTE3Q8IZS6 198 aa9.5□□□□□ -0.89
CHCHD3-202ENST00000423635 ORMDL3Q8N138 153 aa9.5□□□□□ -0.89
CHCHD3-202ENST00000423635 ALKAL2Q6UX46 152 aa9.49□□□□□ -0.89
CHCHD3-202ENST00000423635 TMEM136Q6ZRR5 245 aa9.49□□□□□ -0.89
CHCHD3-202ENST00000423635 CDKN2A-AS1Q9UH64 79 aa9.49□□□□□ -0.89
CHCHD3-202ENST00000423635 HERVK_113P63121 156 aa9.48□□□□□ -0.89
CHCHD3-202ENST00000423635 SEC11AP67812 179 aa9.48□□□□□ -0.89
CHCHD3-202ENST00000423635 CYSLTR1Q9Y271 337 aa9.48□□□□□ -0.89
CHCHD3-202ENST00000423635 C4orf48Q5BLP8 95 aa9.47□□□□□ -0.89
CHCHD3-202ENST00000423635 MRPL54Q6P161 138 aaKnown RBP9.47□□□□□ -0.89
CHCHD3-202ENST00000423635 C3orf22Q8N5N4 141 aa9.47□□□□□ -0.89
CHCHD3-202ENST00000423635 PRELID3AQ96N28 172 aa9.47□□□□□ -0.89
CHCHD3-202ENST00000423635 IGIPA6NJ69 53 aa9.46□□□□□ -0.9
CHCHD3-202ENST00000423635 SEC61BP60468 96 aaKnown RBP9.46□□□□□ -0.9
CHCHD3-202ENST00000423635 NKAPP1Q8N9T2 125 aa9.46□□□□□ -0.9
CHCHD3-202ENST00000423635 PLEKHB2Q96CS7 222 aa9.46□□□□□ -0.9
CHCHD3-202ENST00000423635 PRLHP81277 87 aa9.45□□□□□ -0.9
CHCHD3-202ENST00000423635 IGKV2-28A0A075B6P5 120 aa9.44□□□□□ -0.9
CHCHD3-202ENST00000423635 IGKV2D-28P01615 120 aa9.44□□□□□ -0.9
CHCHD3-202ENST00000423635 ADIRFQ15847 76 aa9.44□□□□□ -0.9
CHCHD3-202ENST00000423635 LOC389332A0A1B0GUA5 103 aa9.43□□□□□ -0.9
CHCHD3-202ENST00000423635 NAT8Q9UHE5 227 aa9.43□□□□□ -0.9
CHCHD3-202ENST00000423635 LAMTOR2Q9Y2Q5 125 aa9.43□□□□□ -0.9
CHCHD3-202ENST00000423635 LCE2CQ5TA81 110 aa9.42□□□□□ -0.9
CHCHD3-202ENST00000423635 FAM19A1Q7Z5A9 133 aa9.42□□□□□ -0.9
CHCHD3-202ENST00000423635 Q8N8P6 123 aa9.42□□□□□ -0.9
CHCHD3-202ENST00000423635 TMEM126AQ9H061 195 aa9.42□□□□□ -0.9
CHCHD3-202ENST00000423635 GEMIN7Q9H840 131 aaKnown RBP9.42□□□□□ -0.9
CHCHD3-202ENST00000423635 SMIM1B2RUZ4 78 aa9.41□□□□□ -0.9
CHCHD3-202ENST00000423635 SCO1O75880 301 aa9.41□□□□□ -0.9
CHCHD3-202ENST00000423635 ORMDL2Q53FV1 153 aa9.41□□□□□ -0.9
CHCHD3-202ENST00000423635 PDZD11Q5EBL8 140 aa9.41□□□□□ -0.9
CHCHD3-202ENST00000423635 MAP1LC3AQ9H492 121 aa9.41□□□□□ -0.9
CHCHD3-202ENST00000423635 RAB5BP61020 215 aa9.4□□□□□ -0.9
CHCHD3-202ENST00000423635 PAPPA-AS1Q5QFB9 102 aa9.4□□□□□ -0.9
CHCHD3-202ENST00000423635 COX7B2Q8TF08 81 aa9.4□□□□□ -0.9
CHCHD3-202ENST00000423635 GNB1LQ9BYB4 327 aa9.4□□□□□ -0.9
CHCHD3-202ENST00000423635 K7EMI3 77 aa9.39□□□□□ -0.91
CHCHD3-202ENST00000423635 ATP5L2Q7Z4Y8 100 aa9.39□□□□□ -0.91
CHCHD3-202ENST00000423635 TMEM238C9JI98 176 aa9.38□□□□□ -0.91
CHCHD3-202ENST00000423635 M0R378 163 aa9.38□□□□□ -0.91
CHCHD3-202ENST00000423635 CBLN2Q8IUK8 224 aa9.38□□□□□ -0.91
CHCHD3-202ENST00000423635 TIMM17AQ99595 171 aa9.37□□□□□ -0.91
CHCHD3-202ENST00000423635 C9JQL5 133 aa9.36□□□□□ -0.91
CHCHD3-202ENST00000423635 IGLV5-45A0A087WSX0 123 aa9.35□□□□□ -0.91
CHCHD3-202ENST00000423635 VPREB1P12018 145 aa9.35□□□□□ -0.91
CHCHD3-202ENST00000423635 SPRR4Q96PI1 79 aa9.35□□□□□ -0.91
CHCHD3-202ENST00000423635 SPINK1P00995 79 aa9.34□□□□□ -0.91
CHCHD3-202ENST00000423635 G0S2P27469 103 aa9.34□□□□□ -0.91
CHCHD3-202ENST00000423635 TINCRA0A1B0GVN0 87 aa9.33□□□□□ -0.92
CHCHD3-202ENST00000423635 KRTAP19-2Q3LHN2 52 aa9.33□□□□□ -0.92
CHCHD3-202ENST00000423635 Q8NBF4 154 aa9.33□□□□□ -0.92
CHCHD3-202ENST00000423635 MT1HP80294 61 aa9.32□□□□□ -0.92
CHCHD3-202ENST00000423635 DAND5Q8N907 189 aa9.32□□□□□ -0.92
CHCHD3-202ENST00000423635 TOMM6Q96B49 74 aa9.32□□□□□ -0.92
CHCHD3-202ENST00000423635 HIGD2AQ9BW72 106 aa9.32□□□□□ -0.92
CHCHD3-202ENST00000423635 A0A1B0GVG6 124 aa9.31□□□□□ -0.92
CHCHD3-202ENST00000423635 CFC1BP0CG36 223 aa9.31□□□□□ -0.92
CHCHD3-202ENST00000423635 RPL24P83731 157 aaKnown RBP9.31□□□□□ -0.92
CHCHD3-202ENST00000423635 XP32Q5T750 250 aa9.31□□□□□ -0.92
CHCHD3-202ENST00000423635 NXT2Q9NPJ8 142 aaKnown RBP9.31□□□□□ -0.92
CHCHD3-202ENST00000423635 ATP5LO75964 103 aa9.31□□□□□ -0.92
CHCHD3-202ENST00000423635 ERASQ7Z444 233 aa9.31□□□□□ -0.92
CHCHD3-202ENST00000423635 SPINK8P0C7L1 97 aa9.3□□□□□ -0.92
CHCHD3-202ENST00000423635 PFN2P35080 140 aa9.3□□□□□ -0.92
CHCHD3-202ENST00000423635 SND1-IT1Q9HBX3 110 aa9.3□□□□□ -0.92
CHCHD3-202ENST00000423635 ZNF706Q9Y5V0 76 aaPredicted RBP9.3□□□□□ -0.92
CHCHD3-202ENST00000423635 PEA15Q15121 130 aa9.28□□□□□ -0.92
CHCHD3-202ENST00000423635 Q8NDZ9 215 aa9.28□□□□□ -0.92
CHCHD3-202ENST00000423635 MRPL18Q9H0U6 180 aaKnown RBP9.28□□□□□ -0.92
CHCHD3-202ENST00000423635 NDUFA12Q9UI09 145 aa9.28□□□□□ -0.92
CHCHD3-202ENST00000423635 LORP23490 312 aaPredicted RBP9.27□□□□□ -0.93
CHCHD3-202ENST00000423635 RPS29P62273 56 aaKnown RBP9.27□□□□□ -0.93
CHCHD3-202ENST00000423635 SCGB3A1Q96QR1 104 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms