RNA–Protein interactions for RNA: ENST00000422863.1

HLA-DQA1-204, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-204ENST00000422863 RPL32P62910 135 aaKnown RBP4.17□□□□□ -1.74
HLA-DQA1-204ENST00000422863 PRLHP81277 87 aa4.17□□□□□ -1.74
HLA-DQA1-204ENST00000422863 LCE1AQ5T7P2 110 aa4.17□□□□□ -1.74
HLA-DQA1-204ENST00000422863 DAND5Q8N907 189 aa4.17□□□□□ -1.74
HLA-DQA1-204ENST00000422863 NRACQ8N912 160 aa4.17□□□□□ -1.74
HLA-DQA1-204ENST00000422863 TMEM18Q96B42 140 aa4.17□□□□□ -1.74
HLA-DQA1-204ENST00000422863 SMIM12Q96EX1 92 aa4.17□□□□□ -1.74
HLA-DQA1-204ENST00000422863 KIR2DL4Q99706 377 aa4.17□□□□□ -1.74
HLA-DQA1-204ENST00000422863 TIMM21Q9BVV7 248 aa4.17□□□□□ -1.74
HLA-DQA1-204ENST00000422863 UMAD1C9J7I0 102 aa4.16□□□□□ -1.74
HLA-DQA1-204ENST00000422863 HBBP68871 147 aa4.16□□□□□ -1.74
HLA-DQA1-204ENST00000422863 PNRC1Q12796 327 aaPredicted RBP4.16□□□□□ -1.74
HLA-DQA1-204ENST00000422863 TMEM191AQ9H0A3 160 aa4.16□□□□□ -1.74
HLA-DQA1-204ENST00000422863 TMA7Q9Y2S6 64 aaKnown RBP4.16□□□□□ -1.74
HLA-DQA1-204ENST00000422863 SSPOA2VEC9 5147 aa4.15□□□□□ -1.74
HLA-DQA1-204ENST00000422863 IGKV2-28A0A075B6P5 120 aa4.15□□□□□ -1.75
HLA-DQA1-204ENST00000422863 A8MWL6 223 aa4.15□□□□□ -1.75
HLA-DQA1-204ENST00000422863 IGKV2D-28P01615 120 aa4.15□□□□□ -1.75
HLA-DQA1-204ENST00000422863 CKS1BP61024 79 aa4.15□□□□□ -1.75
HLA-DQA1-204ENST00000422863 C6orf226Q5I0X4 101 aa4.15□□□□□ -1.75
HLA-DQA1-204ENST00000422863 ZC2HC1BQ5TFG8 222 aa4.15□□□□□ -1.75
HLA-DQA1-204ENST00000422863 KRTAP5-1Q6L8H4 278 aa4.15□□□□□ -1.75
HLA-DQA1-204ENST00000422863 SPAG11AQ6PDA7 123 aa4.15□□□□□ -1.75
HLA-DQA1-204ENST00000422863 AKAP14Q86UN6 197 aa4.15□□□□□ -1.75
HLA-DQA1-204ENST00000422863 BORCS7Q96B45 105 aa4.15□□□□□ -1.75
HLA-DQA1-204ENST00000422863 TP73-AS1Q9UF72 201 aa4.15□□□□□ -1.75
HLA-DQA1-204ENST00000422863 A0A1B0GUT8 65 aa4.14□□□□□ -1.75
HLA-DQA1-204ENST00000422863 TCAPO15273 167 aa4.14□□□□□ -1.75
HLA-DQA1-204ENST00000422863 PDE6DO43924 150 aa4.14□□□□□ -1.75
HLA-DQA1-204ENST00000422863 PRSS2P07478 247 aa4.14□□□□□ -1.75
HLA-DQA1-204ENST00000422863 IFITM2Q01629 132 aa4.14□□□□□ -1.75
HLA-DQA1-204ENST00000422863 FAM19A1Q7Z5A9 133 aa4.14□□□□□ -1.75
HLA-DQA1-204ENST00000422863 HIGD1CA8MV81 97 aa4.13□□□□□ -1.75
HLA-DQA1-204ENST00000422863 MRPS36P82909 103 aaKnown RBP4.13□□□□□ -1.75
HLA-DQA1-204ENST00000422863 MRPL51Q4U2R6 128 aaKnown RBP4.13□□□□□ -1.75
HLA-DQA1-204ENST00000422863 LCE1EQ5T753 118 aa4.13□□□□□ -1.75
HLA-DQA1-204ENST00000422863 Q8NBF4 154 aa4.13□□□□□ -1.75
HLA-DQA1-204ENST00000422863 PLEKHB2Q96CS7 222 aa4.13□□□□□ -1.75
HLA-DQA1-204ENST00000422863 IGLV8-61A0A075B6I0 122 aa4.12□□□□□ -1.75
HLA-DQA1-204ENST00000422863 TMEM238C9JI98 176 aa4.12□□□□□ -1.75
HLA-DQA1-204ENST00000422863 RAB5BP61020 215 aa4.12□□□□□ -1.75
HLA-DQA1-204ENST00000422863 S100A12P80511 92 aa4.12□□□□□ -1.75
HLA-DQA1-204ENST00000422863 PCOTHQ58A44 107 aa4.12□□□□□ -1.75
HLA-DQA1-204ENST00000422863 Q6ZN92 141 aa4.12□□□□□ -1.75
HLA-DQA1-204ENST00000422863 ALKBH7Q9BT30 221 aaPredicted RBP4.12□□□□□ -1.75
HLA-DQA1-204ENST00000422863 SPANXA1Q9NS26 97 aa4.12□□□□□ -1.75
HLA-DQA1-204ENST00000422863 PPP1R2P9O14990 202 aa4.11□□□□□ -1.75
HLA-DQA1-204ENST00000422863 PPP1R17O96001 155 aa4.11□□□□□ -1.75
HLA-DQA1-204ENST00000422863 S100A6P06703 90 aa4.11□□□□□ -1.75
HLA-DQA1-204ENST00000422863 KRTAP5-9P26371 169 aa4.11□□□□□ -1.75
HLA-DQA1-204ENST00000422863 NKAPP1Q8N9T2 125 aa4.11□□□□□ -1.75
HLA-DQA1-204ENST00000422863 IGLV4-3A0A075B6K6 122 aa4.1□□□□□ -1.75
HLA-DQA1-204ENST00000422863 KANTRA0A1W2PQU2 76 aa4.1□□□□□ -1.75
HLA-DQA1-204ENST00000422863 TNFRSF6BO95407 300 aa4.1□□□□□ -1.75
HLA-DQA1-204ENST00000422863 CEBPGP53567 150 aa4.1□□□□□ -1.75
HLA-DQA1-204ENST00000422863 FAM231DQ6ZW35 169 aa4.1□□□□□ -1.75
HLA-DQA1-204ENST00000422863 CBLN2Q8IUK8 224 aa4.1□□□□□ -1.75
HLA-DQA1-204ENST00000422863 Q8IZM0 81 aa4.1□□□□□ -1.75
HLA-DQA1-204ENST00000422863 HIGD2AQ9BW72 106 aa4.1□□□□□ -1.75
HLA-DQA1-204ENST00000422863 USH2AO75445 5202 aa4.09□□□□□ -1.75
HLA-DQA1-204ENST00000422863 F8VRH5 84 aa4.09□□□□□ -1.75
HLA-DQA1-204ENST00000422863 TEX46H3BTG2 121 aa4.09□□□□□ -1.75
HLA-DQA1-204ENST00000422863 CKS2P33552 79 aa4.09□□□□□ -1.75
HLA-DQA1-204ENST00000422863 IFI27P40305 119 aaPredicted RBP4.09□□□□□ -1.75
HLA-DQA1-204ENST00000422863 RIGQ13278 110 aa4.09□□□□□ -1.75
HLA-DQA1-204ENST00000422863 FAM104BQ5XKR9 115 aa4.09□□□□□ -1.75
HLA-DQA1-204ENST00000422863 LINC01561Q8N1V8 128 aa4.09□□□□□ -1.75
HLA-DQA1-204ENST00000422863 C20orf78Q9BR46 151 aa4.09□□□□□ -1.75
HLA-DQA1-204ENST00000422863 SMIM2Q9BVW6 85 aa4.09□□□□□ -1.75
HLA-DQA1-204ENST00000422863 KRTAP4-16G5E9R7 235 aaPredicted RBP4.08□□□□□ -1.76
HLA-DQA1-204ENST00000422863 TEX43Q6ZNM6 134 aa4.08□□□□□ -1.76
HLA-DQA1-204ENST00000422863 TMEM141Q96I45 108 aa4.08□□□□□ -1.76
HLA-DQA1-204ENST00000422863 SPRR4Q96PI1 79 aa4.08□□□□□ -1.76
HLA-DQA1-204ENST00000422863 EIF5A2Q9GZV4 153 aaKnown RBP4.08□□□□□ -1.76
HLA-DQA1-204ENST00000422863 TMEM126AQ9H061 195 aa4.08□□□□□ -1.76
HLA-DQA1-204ENST00000422863 NDUFA12Q9UI09 145 aa4.08□□□□□ -1.76
HLA-DQA1-204ENST00000422863 IGLV5-37A0A075B6J1 123 aa4.07□□□□□ -1.76
HLA-DQA1-204ENST00000422863 TRBV24-1A0A075B6N3 115 aa4.07□□□□□ -1.76
HLA-DQA1-204ENST00000422863 D6R8Y8 96 aa4.07□□□□□ -1.76
HLA-DQA1-204ENST00000422863 M0R378 163 aa4.07□□□□□ -1.76
HLA-DQA1-204ENST00000422863 SPINK1P00995 79 aa4.07□□□□□ -1.76
HLA-DQA1-204ENST00000422863 NPYP01303 97 aa4.07□□□□□ -1.76
HLA-DQA1-204ENST00000422863 ZNF345Q14585 488 aa4.07□□□□□ -1.76
HLA-DQA1-204ENST00000422863 CT83Q5H943 113 aa4.07□□□□□ -1.76
HLA-DQA1-204ENST00000422863 KRTAP5-4Q6L8H1 288 aa4.07□□□□□ -1.76
HLA-DQA1-204ENST00000422863 Q8N377 158 aa4.07□□□□□ -1.76
HLA-DQA1-204ENST00000422863 CDKN2A-AS1Q9UH64 79 aa4.07□□□□□ -1.76
HLA-DQA1-204ENST00000422863 LINC00862A6NCI5 91 aa4.06□□□□□ -1.76
HLA-DQA1-204ENST00000422863 C9orf92A6NGG3 77 aa4.06□□□□□ -1.76
HLA-DQA1-204ENST00000422863 COX6B2Q6YFQ2 88 aa4.06□□□□□ -1.76
HLA-DQA1-204ENST00000422863 C2orf88Q9BSF0 95 aa4.06□□□□□ -1.76
HLA-DQA1-204ENST00000422863 PYGO1Q9Y3Y4 419 aa4.06□□□□□ -1.76
HLA-DQA1-204ENST00000422863 FCGBPQ9Y6R7 5405 aaPredicted RBP4.06□□□□□ -1.76
HLA-DQA1-204ENST00000422863 LOC389332A0A1B0GUA5 103 aa4.05□□□□□ -1.76
HLA-DQA1-204ENST00000422863 RAB5AP20339 215 aa4.05□□□□□ -1.76
HLA-DQA1-204ENST00000422863 C2orf66Q6UXQ4 117 aa4.05□□□□□ -1.76
HLA-DQA1-204ENST00000422863 LINC00518Q8N0U6 118 aa4.05□□□□□ -1.76
HLA-DQA1-204ENST00000422863 GNB1LQ9BYB4 327 aa4.05□□□□□ -1.76
HLA-DQA1-204ENST00000422863 VCX2Q9H322 139 aa4.05□□□□□ -1.76
HLA-DQA1-204ENST00000422863 IGLV9-49A0A0B4J1Y8 123 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms