RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 ANGP03950 147 aaKnown RBP10.02□□□□□ -0.81
HLA-DPA1-242ENST00000419277 MIR7-3HGQ8N6C7 128 aa10.02□□□□□ -0.81
HLA-DPA1-242ENST00000419277 ANKRD29Q8N6D5 301 aa10.02□□□□□ -0.81
HLA-DPA1-242ENST00000419277 SOSTDC1Q6X4U4 206 aa10.01□□□□□ -0.81
HLA-DPA1-242ENST00000419277 C5orf38Q86SI9 138 aa10.01□□□□□ -0.81
HLA-DPA1-242ENST00000419277 LINC00269Q8N2A0 174 aa10.01□□□□□ -0.81
HLA-DPA1-242ENST00000419277 SPATA25Q9BR10 227 aa10.01□□□□□ -0.81
HLA-DPA1-242ENST00000419277 A0A096LPF7 62 aa10□□□□□ -0.81
HLA-DPA1-242ENST00000419277 LINC00158P58513 81 aa10□□□□□ -0.81
HLA-DPA1-242ENST00000419277 PRR34Q9NV39 138 aa10□□□□□ -0.81
HLA-DPA1-242ENST00000419277 TRAV8-4A0A0B4J246 113 aa9.99□□□□□ -0.81
HLA-DPA1-242ENST00000419277 CKS1BP61024 79 aa9.99□□□□□ -0.81
HLA-DPA1-242ENST00000419277 OXLD1Q5BKU9 147 aa9.99□□□□□ -0.81
HLA-DPA1-242ENST00000419277 CFAP161Q6P656 301 aa9.99□□□□□ -0.81
HLA-DPA1-242ENST00000419277 CHCHD10Q8WYQ3 142 aaPredicted RBP9.99□□□□□ -0.81
HLA-DPA1-242ENST00000419277 SND1-IT1Q9HBX3 110 aa9.99□□□□□ -0.81
HLA-DPA1-242ENST00000419277 MTURNQ8N3F0 131 aa9.99□□□□□ -0.81
HLA-DPA1-242ENST00000419277 TRACP01848 142 aa9.98□□□□□ -0.81
HLA-DPA1-242ENST00000419277 MALP21145 153 aa9.98□□□□□ -0.81
HLA-DPA1-242ENST00000419277 KRTAP10-11P60412 298 aa9.98□□□□□ -0.81
HLA-DPA1-242ENST00000419277 RPL28P46779 137 aaKnown RBP9.97□□□□□ -0.81
HLA-DPA1-242ENST00000419277 NBEAL2Q6ZNJ1 2754 aa9.97□□□□□ -0.81
HLA-DPA1-242ENST00000419277 A0A0U1RRA0 63 aa9.96□□□□□ -0.81
HLA-DPA1-242ENST00000419277 KLK5Q9Y337 293 aaPredicted RBP9.96□□□□□ -0.81
HLA-DPA1-242ENST00000419277 NDUFC2O95298 119 aa9.96□□□□□ -0.82
HLA-DPA1-242ENST00000419277 HTN3P15516 51 aa9.96□□□□□ -0.82
HLA-DPA1-242ENST00000419277 GAGE12HA6NDE8 117 aa9.95□□□□□ -0.82
HLA-DPA1-242ENST00000419277 CYSRT1A8MQ03 144 aa9.95□□□□□ -0.82
HLA-DPA1-242ENST00000419277 CCL18P55774 89 aa9.94□□□□□ -0.82
HLA-DPA1-242ENST00000419277 C21orf62-AS1Q17RA5 79 aa9.94□□□□□ -0.82
HLA-DPA1-242ENST00000419277 LYPD5Q6UWN5 251 aa9.94□□□□□ -0.82
HLA-DPA1-242ENST00000419277 C2orf82Q6UX34 121 aa9.94□□□□□ -0.82
HLA-DPA1-242ENST00000419277 H0YGX0 51 aa9.93□□□□□ -0.82
HLA-DPA1-242ENST00000419277 SCGB1A1P11684 91 aa9.93□□□□□ -0.82
HLA-DPA1-242ENST00000419277 KIAA0087Q14695 138 aa9.93□□□□□ -0.82
HLA-DPA1-242ENST00000419277 CLPSL2Q6UWE3 100 aa9.93□□□□□ -0.82
HLA-DPA1-242ENST00000419277 KPRPQ5T749 579 aaPredicted RBP9.93□□□□□ -0.82
HLA-DPA1-242ENST00000419277 UBE2WQ96B02 151 aa9.93□□□□□ -0.82
HLA-DPA1-242ENST00000419277 SIGMAR1Q99720 223 aa9.92□□□□□ -0.82
HLA-DPA1-242ENST00000419277 IGKV2-28A0A075B6P5 120 aa9.9□□□□□ -0.82
HLA-DPA1-242ENST00000419277 GVQW2A0A096LPI5 108 aaPredicted RBP9.9□□□□□ -0.82
HLA-DPA1-242ENST00000419277 A0A0J9YWU9 116 aa9.9□□□□□ -0.82
HLA-DPA1-242ENST00000419277 IGKV2D-28P01615 120 aa9.9□□□□□ -0.82
HLA-DPA1-242ENST00000419277 PFN2P35080 140 aa9.9□□□□□ -0.82
HLA-DPA1-242ENST00000419277 LINC00337Q8N6G1 96 aa9.9□□□□□ -0.82
HLA-DPA1-242ENST00000419277 CLEC2BQ92478 149 aa9.9□□□□□ -0.82
HLA-DPA1-242ENST00000419277 TRRAPQ9Y4A5 3859 aa9.9□□□□□ -0.82
HLA-DPA1-242ENST00000419277 FAM240AA0A1B0GVK7 77 aa9.9□□□□□ -0.83
HLA-DPA1-242ENST00000419277 F8WDY8 70 aa9.89□□□□□ -0.83
HLA-DPA1-242ENST00000419277 SPAG11BQ08648 103 aa9.89□□□□□ -0.83
HLA-DPA1-242ENST00000419277 A0A1B0GX51 115 aa9.88□□□□□ -0.83
HLA-DPA1-242ENST00000419277 Q6ZTC4 211 aa9.88□□□□□ -0.83
HLA-DPA1-242ENST00000419277 C11orf45Q8TAV5 145 aa9.88□□□□□ -0.83
HLA-DPA1-242ENST00000419277 NTN5Q8WTR8 489 aaPredicted RBP9.88□□□□□ -0.83
HLA-DPA1-242ENST00000419277 KLK12Q9UKR0 248 aa9.88□□□□□ -0.83
HLA-DPA1-242ENST00000419277 IGLV10-54A0A075B6I4 117 aa9.87□□□□□ -0.83
HLA-DPA1-242ENST00000419277 DEFB121Q5J5C9 76 aa9.87□□□□□ -0.83
HLA-DPA1-242ENST00000419277 C15orf53Q8NAA6 179 aa9.87□□□□□ -0.83
HLA-DPA1-242ENST00000419277 DNAL4O96015 105 aa9.86□□□□□ -0.83
HLA-DPA1-242ENST00000419277 LINC01556Q5JQF7 62 aa9.86□□□□□ -0.83
HLA-DPA1-242ENST00000419277 ENHOQ6UWT2 76 aa9.86□□□□□ -0.83
HLA-DPA1-242ENST00000419277 TMEM126AQ9H061 195 aa9.86□□□□□ -0.83
HLA-DPA1-242ENST00000419277 DEFB131BA0A096LNP1 70 aa9.85□□□□□ -0.83
HLA-DPA1-242ENST00000419277 SMIM11BQ8TCY0 68 aa9.85□□□□□ -0.83
HLA-DPA1-242ENST00000419277 RETNQ9HD89 108 aa9.85□□□□□ -0.83
HLA-DPA1-242ENST00000419277 MAST4O15021 2626 aa9.84□□□□□ -0.83
HLA-DPA1-242ENST00000419277 SNCGO76070 127 aa9.84□□□□□ -0.83
HLA-DPA1-242ENST00000419277 ACYP1P07311 99 aa9.84□□□□□ -0.83
HLA-DPA1-242ENST00000419277 Q8N3U1 123 aa9.84□□□□□ -0.83
HLA-DPA1-242ENST00000419277 STAB1Q9NY15 2570 aa9.84□□□□□ -0.83
HLA-DPA1-242ENST00000419277 TRAV10A0A0B4J240 114 aa9.83□□□□□ -0.84
HLA-DPA1-242ENST00000419277 INAFM2P0DMQ5 153 aa9.83□□□□□ -0.84
HLA-DPA1-242ENST00000419277 TM2D3Q9BRN9 247 aa9.83□□□□□ -0.84
HLA-DPA1-242ENST00000419277 TEX49A0A1B0GTD5 131 aa9.82□□□□□ -0.84
HLA-DPA1-242ENST00000419277 CDIP1Q9H305 208 aa9.82□□□□□ -0.84
HLA-DPA1-242ENST00000419277 OR13C6PQ8NH95 151 aa9.82□□□□□ -0.84
HLA-DPA1-242ENST00000419277 C2orf48Q96LS8 159 aa9.82□□□□□ -0.84
HLA-DPA1-242ENST00000419277 WFDC10BQ8IUB3 73 aa9.81□□□□□ -0.84
HLA-DPA1-242ENST00000419277 C1orf43Q9BWL3 253 aa9.8□□□□□ -0.84
HLA-DPA1-242ENST00000419277 ZNF561-AS1K7EIQ3 104 aa9.79□□□□□ -0.84
HLA-DPA1-242ENST00000419277 DNAH10OSP0CZ25 163 aa9.79□□□□□ -0.84
HLA-DPA1-242ENST00000419277 BAALC-AS2P0C853 105 aa9.79□□□□□ -0.84
HLA-DPA1-242ENST00000419277 ESRGQ1W209 222 aa9.79□□□□□ -0.84
HLA-DPA1-242ENST00000419277 NANOS2P60321 138 aaKnown RBP9.78□□□□□ -0.84
HLA-DPA1-242ENST00000419277 FAM218AQ96MZ4 157 aa9.77□□□□□ -0.85
HLA-DPA1-242ENST00000419277 FBN1P35555 2871 aaKnown RBP9.77□□□□□ -0.85
HLA-DPA1-242ENST00000419277 H3BQ85 93 aa9.76□□□□□ -0.85
HLA-DPA1-242ENST00000419277 KRTAP26-1Q6PEX3 210 aa9.76□□□□□ -0.85
HLA-DPA1-242ENST00000419277 UNQ6190/PRO20217Q6UXQ8 127 aa9.76□□□□□ -0.85
HLA-DPA1-242ENST00000419277 DNAH3Q8TD57 4116 aa9.76□□□□□ -0.85
HLA-DPA1-242ENST00000419277 S100A7L2Q5SY68 101 aa9.75□□□□□ -0.85
HLA-DPA1-242ENST00000419277 LINC00167Q96N53 147 aa9.75□□□□□ -0.85
HLA-DPA1-242ENST00000419277 PKD1L1Q8TDX9 2849 aa9.74□□□□□ -0.85
HLA-DPA1-242ENST00000419277 RMI2Q96E14 147 aa9.74□□□□□ -0.85
HLA-DPA1-242ENST00000419277 CAMK2N2Q96S95 79 aa9.74□□□□□ -0.85
HLA-DPA1-242ENST00000419277 ORMDL1Q9P0S3 153 aa9.74□□□□□ -0.85
HLA-DPA1-242ENST00000419277 C6orf48Q9UBA6 75 aa9.73□□□□□ -0.85
HLA-DPA1-242ENST00000419277 GHRHP01286 108 aa9.73□□□□□ -0.85
HLA-DPA1-242ENST00000419277 XGP55808 180 aa9.73□□□□□ -0.85
HLA-DPA1-242ENST00000419277 C9orf116Q5BN46 136 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms