RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 MAP1LC3CQ9BXW4 147 aa3.89□□□□□ -1.79
NIFKP3-201ENST00000417799 CST9LQ9H4G1 147 aa3.89□□□□□ -1.79
NIFKP3-201ENST00000417799 KLK12Q9UKR0 248 aa3.89□□□□□ -1.79
NIFKP3-201ENST00000417799 STARD9Q9P2P6 4700 aa3.89□□□□□ -1.79
NIFKP3-201ENST00000417799 TENM2Q9NT68 2774 aa3.88□□□□□ -1.79
NIFKP3-201ENST00000417799 TRAV12-1A0A0B4J245 112 aa3.88□□□□□ -1.79
NIFKP3-201ENST00000417799 IGKV3OR2-268A0A0C4DH90 116 aa3.88□□□□□ -1.79
NIFKP3-201ENST00000417799 IBA57-AS1B1ANH7 110 aa3.88□□□□□ -1.79
NIFKP3-201ENST00000417799 SYS1-DBNDD2H3BUS1 97 aa3.88□□□□□ -1.79
NIFKP3-201ENST00000417799 LY6G6CO95867 125 aa3.88□□□□□ -1.79
NIFKP3-201ENST00000417799 C3orf79P0CE67 100 aa3.88□□□□□ -1.79
NIFKP3-201ENST00000417799 KRTDAPP60985 99 aa3.88□□□□□ -1.79
NIFKP3-201ENST00000417799 REG3AQ06141 175 aa3.88□□□□□ -1.79
NIFKP3-201ENST00000417799 SPATA12Q7Z6I5 190 aa3.88□□□□□ -1.79
NIFKP3-201ENST00000417799 OR10D4PQ8NGN7 298 aa3.88□□□□□ -1.79
NIFKP3-201ENST00000417799 C2orf88Q9BSF0 95 aa3.88□□□□□ -1.79
NIFKP3-201ENST00000417799 PRR34Q9NV39 138 aa3.88□□□□□ -1.79
NIFKP3-201ENST00000417799 TRAV13-1A0A0B4J241 112 aa3.87□□□□□ -1.79
NIFKP3-201ENST00000417799 NBDYA0A0U1RRE5 68 aa3.87□□□□□ -1.79
NIFKP3-201ENST00000417799 LINC00959A0A1B0GUT2 108 aa3.87□□□□□ -1.79
NIFKP3-201ENST00000417799 H0Y8G0 127 aa3.87□□□□□ -1.79
NIFKP3-201ENST00000417799 CCL25O15444 150 aa3.87□□□□□ -1.79
NIFKP3-201ENST00000417799 CRPP02741 224 aa3.87□□□□□ -1.79
NIFKP3-201ENST00000417799 UBE2D1P51668 147 aa3.87□□□□□ -1.79
NIFKP3-201ENST00000417799 SS18Q15532 418 aa3.87□□□□□ -1.79
NIFKP3-201ENST00000417799 MIAQ16674 131 aa3.87□□□□□ -1.79
NIFKP3-201ENST00000417799 TTC32Q5I0X7 151 aa3.87□□□□□ -1.79
NIFKP3-201ENST00000417799 CLPSL2Q6UWE3 100 aa3.87□□□□□ -1.79
NIFKP3-201ENST00000417799 ENHOQ6UWT2 76 aa3.87□□□□□ -1.79
NIFKP3-201ENST00000417799 UBE2WQ96B02 151 aa3.87□□□□□ -1.79
NIFKP3-201ENST00000417799 CHTOPQ9Y3Y2 248 aaKnown RBP3.87□□□□□ -1.79
NIFKP3-201ENST00000417799 PLECQ15149 4684 aaKnown RBP3.87□□□□□ -1.79
NIFKP3-201ENST00000417799 TRAV8-3A0A0A6YYJ7 113 aa3.86□□□□□ -1.79
NIFKP3-201ENST00000417799 TRAV8-4A0A0B4J246 113 aa3.86□□□□□ -1.79
NIFKP3-201ENST00000417799 A0A0J9YXV3 536 aa3.86□□□□□ -1.79
NIFKP3-201ENST00000417799 TINCRA0A1B0GVN0 87 aa3.86□□□□□ -1.79
NIFKP3-201ENST00000417799 IGLC3P0DOY3 106 aa3.86□□□□□ -1.79
NIFKP3-201ENST00000417799 LINC01545Q5VT33 79 aa3.86□□□□□ -1.79
NIFKP3-201ENST00000417799 FAM19A3Q7Z5A8 133 aa3.86□□□□□ -1.79
NIFKP3-201ENST00000417799 CHCHD10Q8WYQ3 142 aaPredicted RBP3.86□□□□□ -1.79
NIFKP3-201ENST00000417799 MRPL35Q9NZE8 188 aaKnown RBP3.86□□□□□ -1.79
NIFKP3-201ENST00000417799 IGLV4-69A0A075B6H9 119 aa3.85□□□□□ -1.79
NIFKP3-201ENST00000417799 IGLV10-54A0A075B6I4 117 aa3.85□□□□□ -1.79
NIFKP3-201ENST00000417799 LOC105371267A0A1B0GV96 52 aa3.85□□□□□ -1.79
NIFKP3-201ENST00000417799 C20orf202A1L168 122 aa3.85□□□□□ -1.79
NIFKP3-201ENST00000417799 F8VRH5 84 aa3.85□□□□□ -1.79
NIFKP3-201ENST00000417799 AKR1D1P51857 326 aa3.85□□□□□ -1.79
NIFKP3-201ENST00000417799 HERVK_113P63121 156 aa3.85□□□□□ -1.79
NIFKP3-201ENST00000417799 SEC11AP67812 179 aa3.85□□□□□ -1.79
NIFKP3-201ENST00000417799 CXCL6P80162 114 aa3.85□□□□□ -1.79
NIFKP3-201ENST00000417799 COX6A2Q02221 97 aa3.85□□□□□ -1.79
NIFKP3-201ENST00000417799 LINC01620Q4KN68 170 aa3.85□□□□□ -1.79
NIFKP3-201ENST00000417799 Q6ZR54 194 aa3.85□□□□□ -1.79
NIFKP3-201ENST00000417799 RMI2Q96E14 147 aa3.85□□□□□ -1.79
NIFKP3-201ENST00000417799 PMCHL2Q9BQD1 86 aa3.85□□□□□ -1.79
NIFKP3-201ENST00000417799 GEMIN7Q9H840 131 aaKnown RBP3.85□□□□□ -1.79
NIFKP3-201ENST00000417799 IGKV2D-24A0A075B6R9 120 aa3.84□□□□□ -1.79
NIFKP3-201ENST00000417799 IGHV3OR16-9A0A0B4J2B5 98 aa3.84□□□□□ -1.79
NIFKP3-201ENST00000417799 LCE6AA0A183 80 aa3.84□□□□□ -1.79
NIFKP3-201ENST00000417799 C11orf86A6NJI1 115 aa3.84□□□□□ -1.79
NIFKP3-201ENST00000417799 M0R2N4 97 aa3.84□□□□□ -1.79
NIFKP3-201ENST00000417799 DPM2O94777 84 aa3.84□□□□□ -1.79
NIFKP3-201ENST00000417799 IGKCP01834 107 aa3.84□□□□□ -1.79
NIFKP3-201ENST00000417799 PLNP26678 52 aa3.84□□□□□ -1.79
NIFKP3-201ENST00000417799 XCL1P47992 114 aa3.84□□□□□ -1.79
NIFKP3-201ENST00000417799 JOSD1Q15040 202 aaPredicted RBP3.84□□□□□ -1.79
NIFKP3-201ENST00000417799 KRTAP26-1Q6PEX3 210 aa3.84□□□□□ -1.79
NIFKP3-201ENST00000417799 CHAC1Q9BUX1 264 aa3.84□□□□□ -1.79
NIFKP3-201ENST00000417799 CDKN2A-AS1Q9UH64 79 aa3.84□□□□□ -1.79
NIFKP3-201ENST00000417799 H3BRM9 83 aa3.83□□□□□ -1.8
NIFKP3-201ENST00000417799 ZNF22P17026 224 aaPredicted RBP3.83□□□□□ -1.8
NIFKP3-201ENST00000417799 TMEM170BQ5T4T1 132 aa3.83□□□□□ -1.8
NIFKP3-201ENST00000417799 LINC00469Q8N7U9 141 aa3.83□□□□□ -1.8
NIFKP3-201ENST00000417799 LYSTQ99698 3801 aa3.83□□□□□ -1.8
NIFKP3-201ENST00000417799 COX7A2LO14548 114 aa3.82□□□□□ -1.8
NIFKP3-201ENST00000417799 KRTAP10-12P60413 245 aa3.82□□□□□ -1.8
NIFKP3-201ENST00000417799 PYY3Q5JQD4 70 aa3.82□□□□□ -1.8
NIFKP3-201ENST00000417799 C1orf134Q5TEV5 83 aa3.82□□□□□ -1.8
NIFKP3-201ENST00000417799 KRTAP5-1Q6L8H4 278 aa3.82□□□□□ -1.8
NIFKP3-201ENST00000417799 C5orf38Q86SI9 138 aa3.82□□□□□ -1.8
NIFKP3-201ENST00000417799 ATOH7Q8N100 152 aa3.82□□□□□ -1.8
NIFKP3-201ENST00000417799 LINC01561Q8N1V8 128 aa3.82□□□□□ -1.8
NIFKP3-201ENST00000417799 C6orf223Q8N319 242 aa3.82□□□□□ -1.8
NIFKP3-201ENST00000417799 ALMS1Q8TCU4 4167 aa3.82□□□□□ -1.8
NIFKP3-201ENST00000417799 VPS13DQ5THJ4 4388 aa3.81□□□□□ -1.8
NIFKP3-201ENST00000417799 TMEM223A0PJW6 202 aa3.81□□□□□ -1.8
NIFKP3-201ENST00000417799 E9PLD3 99 aa3.81□□□□□ -1.8
NIFKP3-201ENST00000417799 PSCAO43653 123 aa3.81□□□□□ -1.8
NIFKP3-201ENST00000417799 SPINK8P0C7L1 97 aa3.81□□□□□ -1.8
NIFKP3-201ENST00000417799 Q6ZRN7 208 aaPredicted RBP3.81□□□□□ -1.8
NIFKP3-201ENST00000417799 IGHV3-64A0A075B6Q5 118 aa3.8□□□□□ -1.8
NIFKP3-201ENST00000417799 IGHV1-58A0A0C4DH39 117 aa3.8□□□□□ -1.8
NIFKP3-201ENST00000417799 HSBP1L1C9JCN9 74 aa3.8□□□□□ -1.8
NIFKP3-201ENST00000417799 APOMO95445 188 aa3.8□□□□□ -1.8
NIFKP3-201ENST00000417799 HERVK_113P61574 105 aa3.8□□□□□ -1.8
NIFKP3-201ENST00000417799 MAJINQ3KP22 176 aa3.8□□□□□ -1.8
NIFKP3-201ENST00000417799 LEPROTO15243 131 aa3.79□□□□□ -1.8
NIFKP3-201ENST00000417799 SMIM6P0DI80 62 aa3.79□□□□□ -1.8
NIFKP3-201ENST00000417799 Q8IZM0 81 aa3.79□□□□□ -1.8
NIFKP3-201ENST00000417799 C15orf56Q8N910 161 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms