RNA–Protein interactions for RNA: ENST00000416581.1

LINC01398-201, Transcript of long intergenic non-protein coding RNA 1398, humanhuman

TSL 1 (best)

Gene LINC01398, Length 1,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01398-201ENST00000416581 PMCHL1Q16048 86 aa8.29□□□□□ -1.08
LINC01398-201ENST00000416581 RNF151Q2KHN1 245 aa8.29□□□□□ -1.08
LINC01398-201ENST00000416581 PDZD11Q5EBL8 140 aa8.28□□□□□ -1.08
LINC01398-201ENST00000416581 TEX43Q6ZNM6 134 aa8.28□□□□□ -1.08
LINC01398-201ENST00000416581 OR10D4PQ8NGN7 298 aa8.28□□□□□ -1.08
LINC01398-201ENST00000416581 LINC00526Q96FQ7 95 aa8.28□□□□□ -1.08
LINC01398-201ENST00000416581 AMELXQ99217 191 aa8.28□□□□□ -1.08
LINC01398-201ENST00000416581 C2orf88Q9BSF0 95 aa8.28□□□□□ -1.08
LINC01398-201ENST00000416581 VCX2Q9H322 139 aa8.28□□□□□ -1.08
LINC01398-201ENST00000416581 TRAV13-1A0A0B4J241 112 aa8.27□□□□□ -1.09
LINC01398-201ENST00000416581 IFITM10A6NMD0 228 aa8.27□□□□□ -1.09
LINC01398-201ENST00000416581 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.27□□□□□ -1.09
LINC01398-201ENST00000416581 ATP5LO75964 103 aa8.27□□□□□ -1.09
LINC01398-201ENST00000416581 COA6Q5JTJ3 125 aaKnown RBP8.27□□□□□ -1.09
LINC01398-201ENST00000416581 LINC00173Q6ZV60 143 aa8.27□□□□□ -1.09
LINC01398-201ENST00000416581 NUPR1O60356 82 aa8.26□□□□□ -1.09
LINC01398-201ENST00000416581 RPL18AQ02543 176 aaKnown RBP8.26□□□□□ -1.09
LINC01398-201ENST00000416581 SPAG11BQ08648 103 aa8.26□□□□□ -1.09
LINC01398-201ENST00000416581 FAM19A2Q8N3H0 131 aa8.26□□□□□ -1.09
LINC01398-201ENST00000416581 UBE2D1P51668 147 aa8.25□□□□□ -1.09
LINC01398-201ENST00000416581 C9orf116Q5BN46 136 aaPredicted RBP8.25□□□□□ -1.09
LINC01398-201ENST00000416581 MRPL35Q9NZE8 188 aaKnown RBP8.25□□□□□ -1.09
LINC01398-201ENST00000416581 NDUFA6P56556 154 aa8.24□□□□□ -1.09
LINC01398-201ENST00000416581 PMVKQ15126 192 aa8.24□□□□□ -1.09
LINC01398-201ENST00000416581 ZC2HC1BQ5TFG8 222 aa8.24□□□□□ -1.09
LINC01398-201ENST00000416581 DIRC1Q969H9 104 aa8.24□□□□□ -1.09
LINC01398-201ENST00000416581 NDUFA1O15239 70 aa8.23□□□□□ -1.09
LINC01398-201ENST00000416581 LEPROTL1O95214 131 aa8.23□□□□□ -1.09
LINC01398-201ENST00000416581 ODF1Q14990 250 aa8.23□□□□□ -1.09
LINC01398-201ENST00000416581 FAM19A3Q7Z5A8 133 aa8.23□□□□□ -1.09
LINC01398-201ENST00000416581 IFI27L1Q96BM0 104 aa8.23□□□□□ -1.09
LINC01398-201ENST00000416581 CST9LQ9H4G1 147 aa8.23□□□□□ -1.09
LINC01398-201ENST00000416581 PSORS1C2Q9UIG4 136 aa8.23□□□□□ -1.09
LINC01398-201ENST00000416581 TNXBP22105 4242 aa8.23□□□□□ -1.09
LINC01398-201ENST00000416581 A0A1W2PNN7 141 aa8.22□□□□□ -1.09
LINC01398-201ENST00000416581 SEC11AP67812 179 aa8.22□□□□□ -1.09
LINC01398-201ENST00000416581 LINC00242Q5T6M2 205 aa8.22□□□□□ -1.09
LINC01398-201ENST00000416581 C5orf38Q86SI9 138 aa8.22□□□□□ -1.09
LINC01398-201ENST00000416581 ORAOV1Q8WV07 137 aa8.22□□□□□ -1.09
LINC01398-201ENST00000416581 HSPB8Q9UJY1 196 aa8.22□□□□□ -1.09
LINC01398-201ENST00000416581 IGHV3OR16-9A0A0B4J2B5 98 aa8.21□□□□□ -1.1
LINC01398-201ENST00000416581 TLX1NBP0CAT3 122 aa8.21□□□□□ -1.1
LINC01398-201ENST00000416581 C1orf137Q5JT78 98 aa8.21□□□□□ -1.1
LINC01398-201ENST00000416581 PACRGQ96M98 296 aaPredicted RBP8.21□□□□□ -1.1
LINC01398-201ENST00000416581 HERVK_113P63121 156 aa8.2□□□□□ -1.1
LINC01398-201ENST00000416581 LRP2P98164 4655 aa8.2□□□□□ -1.1
LINC01398-201ENST00000416581 TRAV12-1A0A0B4J245 112 aa8.19□□□□□ -1.1
LINC01398-201ENST00000416581 TINCRA0A1B0GVN0 87 aa8.19□□□□□ -1.1
LINC01398-201ENST00000416581 FABP4P15090 132 aa8.19□□□□□ -1.1
LINC01398-201ENST00000416581 GEMIN7Q9H840 131 aaKnown RBP8.19□□□□□ -1.1
LINC01398-201ENST00000416581 IGLV7-43P04211 117 aa8.18□□□□□ -1.1
LINC01398-201ENST00000416581 S100A6P06703 90 aa8.18□□□□□ -1.1
LINC01398-201ENST00000416581 IGLC3P0DOY3 106 aa8.18□□□□□ -1.1
LINC01398-201ENST00000416581 LINC01561Q8N1V8 128 aa8.18□□□□□ -1.1
LINC01398-201ENST00000416581 IGLV1-50A0A075B6I6 118 aa8.17□□□□□ -1.1
LINC01398-201ENST00000416581 A0A087WZ39 114 aa8.17□□□□□ -1.1
LINC01398-201ENST00000416581 PHF5AQ7RTV0 110 aaKnown RBP8.17□□□□□ -1.1
LINC01398-201ENST00000416581 MAP1LC3CQ9BXW4 147 aa8.17□□□□□ -1.1
LINC01398-201ENST00000416581 CHTOPQ9Y3Y2 248 aaKnown RBP8.17□□□□□ -1.1
LINC01398-201ENST00000416581 IGLV5-45A0A087WSX0 123 aa8.16□□□□□ -1.1
LINC01398-201ENST00000416581 TRBV30A0A0K0K1B3 111 aa8.16□□□□□ -1.1
LINC01398-201ENST00000416581 H0Y9J4 135 aa8.16□□□□□ -1.1
LINC01398-201ENST00000416581 CDKN2A-AS1Q9UH64 79 aa8.16□□□□□ -1.1
LINC01398-201ENST00000416581 F8VRH5 84 aa8.15□□□□□ -1.1
LINC01398-201ENST00000416581 RPL13AP40429 203 aaKnown RBP8.15□□□□□ -1.1
LINC01398-201ENST00000416581 HIST3H2BBQ8N257 126 aa8.15□□□□□ -1.1
LINC01398-201ENST00000416581 LINC00469Q8N7U9 141 aa8.15□□□□□ -1.1
LINC01398-201ENST00000416581 S100A2P29034 98 aa8.14□□□□□ -1.11
LINC01398-201ENST00000416581 C11orf86A6NJI1 115 aa8.13□□□□□ -1.11
LINC01398-201ENST00000416581 H0Y8G0 127 aa8.13□□□□□ -1.11
LINC01398-201ENST00000416581 H3BRM9 83 aa8.13□□□□□ -1.11
LINC01398-201ENST00000416581 SYS1-DBNDD2H3BUS1 97 aa8.13□□□□□ -1.11
LINC01398-201ENST00000416581 SNRPEP62304 92 aaKnown RBP8.13□□□□□ -1.11
LINC01398-201ENST00000416581 UBE2BP63146 152 aa8.13□□□□□ -1.11
LINC01398-201ENST00000416581 KRTAP9-2Q9BYQ4 174 aa8.13□□□□□ -1.11
LINC01398-201ENST00000416581 C6orf48Q9UBA6 75 aa8.13□□□□□ -1.11
LINC01398-201ENST00000416581 C5orf52A6NGY3 159 aa8.12□□□□□ -1.11
LINC01398-201ENST00000416581 NDUFC2-KCTD14E9PQ53 114 aa8.12□□□□□ -1.11
LINC01398-201ENST00000416581 M0QXV9 152 aa8.12□□□□□ -1.11
LINC01398-201ENST00000416581 ZNF22P17026 224 aaPredicted RBP8.12□□□□□ -1.11
LINC01398-201ENST00000416581 UNQ6190/PRO20217Q6UXQ8 127 aa8.12□□□□□ -1.11
LINC01398-201ENST00000416581 FAM19A5Q7Z5A7 132 aaPredicted RBP8.12□□□□□ -1.11
LINC01398-201ENST00000416581 GAGE2EQ4V326 116 aa8.11□□□□□ -1.11
LINC01398-201ENST00000416581 PET117Q6UWS5 81 aa8.11□□□□□ -1.11
LINC01398-201ENST00000416581 HIST1H2BLQ99880 126 aa8.11□□□□□ -1.11
LINC01398-201ENST00000416581 GAGE2DQ9UEU5 116 aa8.11□□□□□ -1.11
LINC01398-201ENST00000416581 SMIM1B2RUZ4 78 aa8.1□□□□□ -1.11
LINC01398-201ENST00000416581 PRSS2P07478 247 aa8.1□□□□□ -1.11
LINC01398-201ENST00000416581 C3orf79P0CE67 100 aa8.1□□□□□ -1.11
LINC01398-201ENST00000416581 PLNP26678 52 aa8.1□□□□□ -1.11
LINC01398-201ENST00000416581 TMEM170BQ5T4T1 132 aa8.1□□□□□ -1.11
LINC01398-201ENST00000416581 C10orf25Q5T742 122 aa8.1□□□□□ -1.11
LINC01398-201ENST00000416581 PRR26Q8N8Z3 221 aa8.1□□□□□ -1.11
LINC01398-201ENST00000416581 DPM2O94777 84 aa8.09□□□□□ -1.11
LINC01398-201ENST00000416581 SPINK8P0C7L1 97 aa8.09□□□□□ -1.11
LINC01398-201ENST00000416581 KRTDAPP60985 99 aa8.09□□□□□ -1.11
LINC01398-201ENST00000416581 KIAA0087Q14695 138 aa8.09□□□□□ -1.11
LINC01398-201ENST00000416581 LINC01545Q5VT33 79 aa8.09□□□□□ -1.11
LINC01398-201ENST00000416581 Q8IZM0 81 aa8.09□□□□□ -1.11
LINC01398-201ENST00000416581 IGLV5-39A0A0G2JS06 123 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms