RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 NDUFC1O43677 76 aa13.29□□□□□ -0.28
SHANK3-202ENST00000414786 COX17Q14061 63 aa13.29□□□□□ -0.28
SHANK3-202ENST00000414786 MOBPQ13875 183 aa13.28□□□□□ -0.28
SHANK3-202ENST00000414786 COX6B2Q6YFQ2 88 aa13.28□□□□□ -0.28
SHANK3-202ENST00000414786 Q8IZM0 81 aa13.28□□□□□ -0.28
SHANK3-202ENST00000414786 MDFIQ99750 246 aa13.27□□□□□ -0.28
SHANK3-202ENST00000414786 FAM229AH3BQW9 127 aa13.27□□□□□ -0.29
SHANK3-202ENST00000414786 BRWD1-AS2P59051 145 aa13.27□□□□□ -0.29
SHANK3-202ENST00000414786 TRBV7-7A0A0K0K1E9 115 aa13.26□□□□□ -0.29
SHANK3-202ENST00000414786 Q8N814 137 aa13.26□□□□□ -0.29
SHANK3-202ENST00000414786 ATP5EP56381 51 aaPredicted RBP13.25□□□□□ -0.29
SHANK3-202ENST00000414786 SPINT4Q6UDR6 99 aa13.25□□□□□ -0.29
SHANK3-202ENST00000414786 LIMD2Q9BT23 127 aa13.25□□□□□ -0.29
SHANK3-202ENST00000414786 NRACQ8N912 160 aa13.25□□□□□ -0.29
SHANK3-202ENST00000414786 MYO18BQ8IUG5 2567 aa13.24□□□□□ -0.29
SHANK3-202ENST00000414786 C16orf90A8MZG2 172 aa13.23□□□□□ -0.29
SHANK3-202ENST00000414786 FSTL3O95633 263 aa13.23□□□□□ -0.29
SHANK3-202ENST00000414786 C2CD3Q4AC94 2353 aa13.22□□□□□ -0.29
SHANK3-202ENST00000414786 ZNF580Q9UK33 172 aa13.22□□□□□ -0.29
SHANK3-202ENST00000414786 ODF3L2Q3SX64 289 aa13.21□□□□□ -0.29
SHANK3-202ENST00000414786 SMCR5Q8TEV8 140 aa13.21□□□□□ -0.29
SHANK3-202ENST00000414786 COX7CP15954 63 aa13.21□□□□□ -0.3
SHANK3-202ENST00000414786 Q6ZRU5 148 aa13.2□□□□□ -0.3
SHANK3-202ENST00000414786 EGFEM1PQ0D2K5 195 aa13.2□□□□□ -0.3
SHANK3-202ENST00000414786 MRPS36P82909 103 aaKnown RBP13.19□□□□□ -0.3
SHANK3-202ENST00000414786 FHL2Q14192 279 aa13.18□□□□□ -0.3
SHANK3-202ENST00000414786 LYPD5Q6UWN5 251 aa13.18□□□□□ -0.3
SHANK3-202ENST00000414786 ACYP2P14621 99 aa13.17□□□□□ -0.3
SHANK3-202ENST00000414786 Q6ZPA2 131 aa13.17□□□□□ -0.3
SHANK3-202ENST00000414786 Q8N3U1 123 aa13.17□□□□□ -0.3
SHANK3-202ENST00000414786 A0A1B0GU69 56 aa13.16□□□□□ -0.3
SHANK3-202ENST00000414786 C1orf64Q8NEQ6 169 aa13.16□□□□□ -0.3
SHANK3-202ENST00000414786 CACNA1AO00555 2505 aa13.16□□□□□ -0.3
SHANK3-202ENST00000414786 C22orf24Q9Y442 160 aa13.15□□□□□ -0.3
SHANK3-202ENST00000414786 Q6ZSN1 163 aa13.15□□□□□ -0.3
SHANK3-202ENST00000414786 C11orf1Q9H5F2 150 aa13.15□□□□□ -0.3
SHANK3-202ENST00000414786 ACACBO00763 2458 aa13.15□□□□□ -0.31
SHANK3-202ENST00000414786 IGLV1-40P01703 118 aa13.14□□□□□ -0.31
SHANK3-202ENST00000414786 TYMSOSQ8TAI1 123 aa13.13□□□□□ -0.31
SHANK3-202ENST00000414786 KLLNB2CW77 178 aa13.13□□□□□ -0.31
SHANK3-202ENST00000414786 C2orf91Q6ZV80 131 aa13.12□□□□□ -0.31
SHANK3-202ENST00000414786 TRAV7A0A075B6U4 112 aa13.11□□□□□ -0.31
SHANK3-202ENST00000414786 SPAG11AQ6PDA7 123 aa13.11□□□□□ -0.31
SHANK3-202ENST00000414786 Q96NJ1 140 aa13.11□□□□□ -0.31
SHANK3-202ENST00000414786 PHF5AQ7RTV0 110 aaKnown RBP13.11□□□□□ -0.31
SHANK3-202ENST00000414786 SMIM1B2RUZ4 78 aa13.1□□□□□ -0.31
SHANK3-202ENST00000414786 Q6JHZ5 121 aa13.1□□□□□ -0.31
SHANK3-202ENST00000414786 COL5A1P20908 1838 aaPredicted RBP13.1□□□□□ -0.31
SHANK3-202ENST00000414786 FHL3Q13643 280 aa13.1□□□□□ -0.31
SHANK3-202ENST00000414786 SMIM26A0A096LP01 95 aa13.09□□□□□ -0.31
SHANK3-202ENST00000414786 CHCHD7Q9BUK0 85 aa13.08□□□□□ -0.31
SHANK3-202ENST00000414786 IMUPQ9GZP8 106 aa13.08□□□□□ -0.31
SHANK3-202ENST00000414786 ADAMTSL4-AS1Q5T5F5 129 aa13.08□□□□□ -0.32
SHANK3-202ENST00000414786 SMIM29Q86T20 159 aa13.08□□□□□ -0.32
SHANK3-202ENST00000414786 IGLV1-51P01701 117 aa13.08□□□□□ -0.32
SHANK3-202ENST00000414786 P0C879 139 aa13.08□□□□□ -0.32
SHANK3-202ENST00000414786 APLNQ9ULZ1 77 aa13.07□□□□□ -0.32
SHANK3-202ENST00000414786 KIAA0087Q14695 138 aa13.07□□□□□ -0.32
SHANK3-202ENST00000414786 ZNF295-AS1Q8N0V1 137 aa13.07□□□□□ -0.32
SHANK3-202ENST00000414786 ANKHD1Q8IWZ3 2542 aaKnown RBP13.07□□□□□ -0.32
SHANK3-202ENST00000414786 POLR2KP53803 58 aaKnown RBP13.06□□□□□ -0.32
SHANK3-202ENST00000414786 PTPRBP23467 1997 aa13.06□□□□□ -0.32
SHANK3-202ENST00000414786 SSBP3-AS1Q7Z2R9 100 aa13.05□□□□□ -0.32
SHANK3-202ENST00000414786 TSPEAR-AS2P59090 65 aa13.05□□□□□ -0.32
SHANK3-202ENST00000414786 RPL37AP61513 92 aaKnown RBP13.04□□□□□ -0.32
SHANK3-202ENST00000414786 TTC28Q96AY4 2481 aa13.04□□□□□ -0.32
SHANK3-202ENST00000414786 LRP4O75096 1905 aa13.03□□□□□ -0.32
SHANK3-202ENST00000414786 LINC00574Q9H8X3 128 aa13.02□□□□□ -0.32
SHANK3-202ENST00000414786 Q8N6K4 173 aa13.02□□□□□ -0.32
SHANK3-202ENST00000414786 C9orf92A6NGG3 77 aa13.02□□□□□ -0.33
SHANK3-202ENST00000414786 ATP11AUNQ6ZP68 121 aa13.02□□□□□ -0.33
SHANK3-202ENST00000414786 RTL8CO15255 209 aa13.01□□□□□ -0.33
SHANK3-202ENST00000414786 TMEM254Q8TBM7 123 aa13.01□□□□□ -0.33
SHANK3-202ENST00000414786 PTPRSQ13332 1948 aa13.01□□□□□ -0.33
SHANK3-202ENST00000414786 LINC01554Q52M75 96 aa13□□□□□ -0.33
SHANK3-202ENST00000414786 LINC00313P59037 77 aa13□□□□□ -0.33
SHANK3-202ENST00000414786 NHLRC4P0CG21 123 aaPredicted RBP12.99□□□□□ -0.33
SHANK3-202ENST00000414786 C6orf48Q9UBA6 75 aa12.99□□□□□ -0.33
SHANK3-202ENST00000414786 EIF4EBP1Q13541 118 aaPredicted RBP12.99□□□□□ -0.33
SHANK3-202ENST00000414786 IGIPA6NJ69 53 aa12.98□□□□□ -0.33
SHANK3-202ENST00000414786 SMR3BP02814 79 aaPredicted RBP12.96□□□□□ -0.34
SHANK3-202ENST00000414786 ADAMTS20P59510 1910 aa12.94□□□□□ -0.34
SHANK3-202ENST00000414786 LINC00315P59091 139 aa12.93□□□□□ -0.34
SHANK3-202ENST00000414786 LINC00167Q96N53 147 aa12.93□□□□□ -0.34
SHANK3-202ENST00000414786 COL4A4P53420 1690 aaPredicted RBP12.93□□□□□ -0.34
SHANK3-202ENST00000414786 MUC7Q8TAX7 377 aa12.89□□□□□ -0.35
SHANK3-202ENST00000414786 CPAMD8Q8IZJ3 1885 aa12.89□□□□□ -0.35
SHANK3-202ENST00000414786 IGLV6-57P01721 117 aa12.88□□□□□ -0.35
SHANK3-202ENST00000414786 LINC00846Q9NV44 126 aa12.88□□□□□ -0.35
SHANK3-202ENST00000414786 CDIP1Q9H305 208 aa12.88□□□□□ -0.35
SHANK3-202ENST00000414786 CRIP3Q6Q6R5 217 aa12.88□□□□□ -0.35
SHANK3-202ENST00000414786 Q8N2B8 174 aa12.87□□□□□ -0.35
SHANK3-202ENST00000414786 PIEZO2Q9H5I5 2752 aa12.87□□□□□ -0.35
SHANK3-202ENST00000414786 C16orf95Q9H693 158 aa12.86□□□□□ -0.35
SHANK3-202ENST00000414786 A0A1W2PPR1 153 aa12.86□□□□□ -0.35
SHANK3-202ENST00000414786 ST20-AS1Q8NBB2 130 aa12.86□□□□□ -0.35
SHANK3-202ENST00000414786 WDR87Q6ZQQ6 2873 aa12.86□□□□□ -0.35
SHANK3-202ENST00000414786 YPEL4Q96NS1 127 aa12.85□□□□□ -0.35
SHANK3-202ENST00000414786 MYO9AB2RTY4 2548 aa12.83□□□□□ -0.36
SHANK3-202ENST00000414786 EPM2AB3EWF7 344 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms